• 한국수산과학회지
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• 제55권5호
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• pp.557-566
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• 2022

The Japanese eel Anguilla japonica is a highly valued research object that is important for aquaculture in Asia, including the Republic of Korea. However, few studies have been conducted analyzing parentage using microsatellite markers derived from the Japanese eel. We acquired Japanese eel genome data using next generation sequencing technology, and constructed a draft genome comprising 1,087 Mbp. Using the Simple Sequence Repeat Identification Tool program, 444,724 microsatellites were identified. Of these, 1,842 microsatellites located in the 3' untranslated region, which are stably inherited, were finally selected. Ninety-six primers were selected to validate polymorphism at these microsatellites, and 9 primers were finally identified for multiplex analysis. Using multiplex polymerase chain reaction with three different fluorescence chemistries, we performed parentage analysis of an artificial Japanese eel population. CERVUS software was used to calculate the logarithm of the odds (LOD) scores and the confidence of the parentage assignments. The results presented here show that 83 out of 85 paternity cases were assigned at 95% confidence to a candidate father and mother with LOD scores ranging from 4.79 to 28.2. This study provided a microsatellite marker-based assay for parentage analysis of Japanese eels, which will be useful for selective breeding and genetic diversity studies.

• Journal of Veterinary Science
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• 제21권3호
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• pp.36.1-36.9
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• 2020

Background: Pseudorabies, also known as Aujeszky's disease, is caused by the pseudorabies virus (PRV) and has been recognized as a critical disease affecting the pig industry and a wide range of animals around the world, resulting in great economic losses each year. Shandong province, one of the most vital food animal-breeding regions in China, has a very dense pig population, within which pseudorabies infections were detected in recent years. The data, however, on PRV epidemiology and coinfection rates of PRV with other major swine diseases is sparse. Objectives: This study aimed to investigate the PRV epidemiology in Shandong and analyze the current control measures. Methods: In this study, a total number of 16,457 serum samples and 1,638 tissue samples, which were collected from 362 intensive pig farms (≥ 300 sows/farm) covered all cities in Shandong, were tested by performing enzyme-linked immunosorbent assay (ELISA) and polymerase chain reaction (PCR). Results: Overall, 52.7% and 91.5% of the serum samples were positive for PRV-gE and -gB, respectively, based on ELISA results. In addition, 15.7% of the tissue samples were PCR positive for PRV. The coinfection rates of PRV with porcine circovirus type 2 (PCV2), porcine reproductive and respiratory syndrome virus, and classical swine fever virus were measured; coinfection with PCV2 was 35.0%, higher than those of the other two viruses. Macroscopic and microscopic lesions were observed in various tissues during histopathological examination. Conclusions: The results demonstrate the PRV prevalence and its coinfection rates in Shandong province and indicate that pseudorabies is endemic in pig farms in this region. This study provides epidemiological data that can be useful in the prevention and control of pseudorabies in Shandong, China.

• 한국자원식물학회지
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• 제36권1호
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• pp.91-99
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• 2023

기후변화 대응 바이오매스 생산이 우수한 활엽수 경제 조림수종 개발에 대한 수요가 증가하고 있다. 아까시나무는 탄소흡수능이 우수한 속성수로서 국내 적응성이 뛰어나고 경제적, 환경적 기능이 우수하다. 본 연구는 비교선발법을 이용하여 용재수로서 가치가 높은 아까시나무 우량개체 64본을 선발하였다. 경기, 강원, 충청, 경상 등 4개 지역으로 나누어서 생장특성을 비교한 결과 선발목들은 비교목들에 비해 수고, 흉고직경, 지하고, 통직성에서 유의적으로 우수한 형질을 보였다. 특히 충청지역의 선발목들이 가장 우수한 생장특성을 나타냈으며, 임분별로는 고성, 천안, 안동 집단이 우량집단으로 나타났다. 생장에 영향을 주는 요인 중에서 토양 성분은 상관관계가 없었으며, 대단위 산림 조림 지역 혹은 호수와 저수지가 인접한 지역의 선발목이 수고 생장이 우수한 것으로 나타났다.

• 한국자원식물학회:학술대회논문집
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• 한국자원식물학회 2020년도 추계국제학술대회
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• pp.65-65
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• 2020

Bakanae disease, caused by Gibberella fujikuroi, is one of the most devastating diseases threatening rice production in Korea. In recent years, the incidence of bakanae disease became alarming due to the mechanical transplanting practice where the spread of bakanae can be amplified during accelerating seeds growth, due to the use of seeding boxes. The development of resistant rice cultivars could be the primary and effective method for controlling bakanae disease. However, the effects of individual resistance genes are relatively small. Therefore, pyramiding of bakane R genes in rice breeding is a promising strategy having a high potential to mitigate the advert effects of bakanae disease. This study employed a gene pyramiding approach to develop bakanae disease resistant rice lines carrying qBK1, qFfR1 introduced from rice line MY299BK and cv. Nampyeong, respectively. The MY299BK carries qBK1 introduced from cv. Shingwang, which was found to have a high resistance compare to Nampyeong. In addition, the pyramiding effect of the qBK1 and qFfR1 resistance genes were investigated, and the presence or absence of these genes helped us investigate their interaction through bioassay method and MAS. Furthermore, the distribution of resistance in the population showed a biased distribution toward resistance in the F6:7 populutions. However, we could not confirm the accumulation effect of the resistance gene, but the difference between the two genes by the SN2 marker was confirmed. Therefore, the qBK1 gene harbored by MY299BK appears to be different from the qFfR1 carried by Nampyeong, suspected to possess a different bakanae disease resistant gene different from those found in MY299BK and Nampyeong.

• Journal of Animal Science and Technology
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• 제65권6호
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• pp.1124-1150
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• 2023

This study aimed to analyze the leading research materials and research trends related to livestock food in Asia in recent years and propose future research agendas to ultimately contribute to the development of related livestock species. On analyzing more than 200 relevant articles, a high frequency of studies on livestock species and products with large breeding scales and vast markets was observed. Asia possesses the largest pig population and most extensive pork market, followed by that of beef, chicken, and milk; moreover, blood and egg markets have also been studied. Regarding research keywords, "meat quality" and "probiotics" were the most common, followed by "antioxidants", which have been extensively studied in the past, and "cultured meat", which has recently gained traction. The future research agenda for meat products is expected to be dominated by alternative livestock products, such as cultured and plant-derived meats; improved meat product functionality and safety; the environmental impacts of livestock farming; and animal welfare research. The future research agenda for dairy products is anticipated to include animal welfare, dairy production, probiotic-based development of high-quality functional dairy products, the development of alternative dairy products, and the advancement of lactose-free or personalized dairy products. However, determining the extent to which the various research articles' findings have been applied in real-world industry proved challenging, and research related to animal food laws and policies and consumer surveys was lacking. In addition, studies on alternatives for sustainable livestock development could not be identified. Therefore, future research may augment industrial application, and multidisciplinary research related to animal food laws and policies as well as eco-friendly livestock production should be strengthened.

• 한국작물학회지
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• 제68권3호
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• pp.147-166
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• 2023

Seed color is controlled by several genes and is a key trait in determining the metabolite content and biological activities of legume genotypes. In this study, 296 adzuki bean accessions, including 159 grey, 99 red, and 38 white adzuki beans, were grown in Korea. Variations in total phenolic content (TPC), total saponin content (TSC), DPPH^• scavenging activity, ABTS^•+ scavenging activity, and ferric reducing antioxidant power (FRAP) were assessed and were reported to be in the ranges of 1.52-8.24 mg GAE/g, 14.36-114.22 mg DE/g, 0.23-12.84 mg AAE/g, 1.05-17.66 mg TE/g, and 0.59-13.14 mg AAE/g, respectively, with a wide variation across adzuki beans. Except for DPPH^• scavenging activity, the average values declined in the order gray > red > white adzuki beans, each demonstrating a significant variation (p < 0.05). White adzuki beans, which showed low metabolite content and antioxidant activity, were clearly separated from the gray and red genotypes using principal component and hierarchical cluster analyses. Moreover, TPC, TSC, and antioxidant activities were strongly correlated, regardless of seed color. Overall, the diversity of the TPC, TSC, and antioxidant activity in a broad population of adzuki bean genotypes was determined. Furthermore, this study found that seed color variation in adzuki beans had a significant effect on the metabolite content and antioxidant activity. Superior accessions with high levels of TPC, TSC, and antioxidant activity were also discovered and could be used for functional plant breeding and human consumption. The findings of this study may be useful for understanding the relationship between seed coat color and metabolite concentration in adzuki beans, paving the way for molecular-level analyses.

• 한국작물학회지
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• 제51권spc1호
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• pp.283-291
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• 2006

To investigate seed non destructive and fast determination technique utilizing near infrared reflectance spectroscopy (NIRs) for screening ultra high oleic (C18:1) and linoleic (C18:2) fatty acid content sesame varieties among genetic resources and lines of pedigree generations of cross and mutation breeding were carried out in National Institute of Crop Science (NICS). 150 among 378 landraces and introduced cultivars were released to analyse fatty acids by NIRs and gas chromatography (GC). Average content of each fatty acid was 9.64% in palmitic acid (C16:0), 4.73% in stearic acid (C18:0), 42.26% in oleic acid and 43.38% in linoleic acid by GC. The content range of each fatty acid was from 7.29 to 12.27% in palmitic, 6.49% from 2.39 to 8.88% in stearic, 12.59% of wider range compared to that of stearic and palmitic from 37.36 to 49.95% in oleic and of the widest from 30.60 to 47.40% in linoleic acid. Spectrums analyzed by NIRs were distributed from 400 to 2,500 nm wavelengths and varietal distribution of fatty acids were appeared as regular distribution. Varietal differences of oleic acid content good for food processing and human health by NIRs was 14.08% of which 1.49% wider range than that of GC from 38.31 to 52.39%. Varietal differences of linoleic acid content by NIRs was 16.41% of which 0.39% narrower range than that of GC from 30.60 to 47.01%. Varietal differences of oleic and linoleic acid content in NIRs analysis were appeared relatively similar inclination compared with those of GC. Partial least square regression (PLSR) among multiple variant regression (MVR) in NIRs calibration statistics was carried out in spectrum characteristics on the wavelength from 700 to 2,500 nm with oleic and linoleic acids. Correlation coefficient of root square (RSQ) in oleic acid content was 0.724 of which 72.4 percent of sample varieties among all distributed in the range of 0.570 percent of standard error when calibrated (SEC) which were considerably acceptable in statistic confidence significantly for analysis between NIRs and GC. Standard error of cross validation (SECV) of oleic acid was 0.725 of which distributed in the range of 0.725 percent standard error among the samples of mother population between analyzed value by NIRs analysis and analyzed value by GC. RSQ of linoleic acid content was 0.735 of which 73.5 percent of sample varieties among all distributed in the range of 0.643 percent of SEC. SECV of linoleic acid was 0.711 of which distributed in the range of 0.711 percent standard error among the samples of mother population between NIRs analysis and GC analysis. Consequently, adoption NIR analysis for fatty acids of oleic and linoleic instead that of GC was recognized statistically significant between NIRs and GC analysis through not only majority of samples distributed in the range of negligible SEC but also SECV. For enlarging and increasing statistic significance of NIRs analysis, wider range of fatty acids contented sesame germplasm should be kept on releasing additionally for increasing correlation coefficient of RSQ and reducing SEC and SECV in the future.

• 한국작물학회지
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• 제65권3호
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• pp.172-181
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• 2020

고시히카리는 도열병과 쓰러짐에 약하지만 밥맛 좋은 쌀로 유명하고, 육성된 지 60년이 넘은 지금까지도 일본에서 가장 많이 재배되는 품종이다. 고시히카리에 도열병에 강하면서 생육이 빠른 백일미를 교배한 RIL집단(KBRIL)에서 도열병 저항성에 대한 유전분석을 수행하여 저항성 유전자의 염색체 상 위치를 규명하고, 고시히카리의 우수한 미질을 보유하면서 도열병에도 강한 계통을 선발하기 위해 본 연구를 수행하였다. 주요 결과는 다음과 같다. 1. 고시히카리×백일미 RIL 394계통과 모·부본의 도열병 저항성(전주, 남원) 및 주요 농업형질을 조사하고, 유전 분석을 위해 사용된 142계통으로 총 130개 SNP 마커, 1,272.7cM의 유전자지도를 작성하였다. 도열병 저항성 QTL 분석 결과 전주에서는 1번 염색체의 qBL1.1이, 남원에서는 전주와 동일한 qBL1.1과 추가로 2번 염색체의 qBL2.1이 탐지되었다. 2. RIL 394계통의 qBL1.1과 qBL2.1 유전자형을 도출하고 각 QTL의 백일미 대립인자 집적에 의한 도열병 저항성 강화 효과를 관찰하였다. 전주에서는 qBL1.1의 경우에만 백일미 대립인자 집적에 의하여 도열병 저항성이 강화되었다. 반면 남원에서는 qBL1.1, qBL2.1 모두 백일미 대립인자가 집적될 때 도열병 저항성이 강화되었다. qBL1.1, qBL2.1은 출수기, 간장, 수장, 수수를 포함한 주요 농업형질에는 영향을 미치지 않았다. 3. 고시히카리×백일미 RIL 394계통 중에서 출수기와 간장을 기준으로 고시히카리와 유사하면서 도열병에 약/강한(KS/KR) 계통과 백일미와 유사하면서 도열병에 강한(BR) 계통을 각 15계통씩 선발하였다. KR 그룹은 완전 미율이 가장 우수하여 밥맛 검정, 수량성 등 추가조사를 통해 고시히카리의 우수한 밥맛을 지니면서 도열병 저항성을 보유한 고품질 밥쌀용 품종개발에 활용할 계획이다. 또한 BR그룹은 미질이 우수하면서 출수가 빠른 고품질 품종 개발에 유용할 것으로 기대된다.

• Journal of Animal Science and Technology
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• 제50권5호
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• pp.621-632
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• 2008

제주재래흑돼지와 Landrace의 상호교차교배를 통하여 생산된 F2 집단에 대해 총 4개의 유전자(ADCYAP1R1, FABP3, MC4R, MYL2)에서 5 좌위의 단일염기변이의 다형성을 조사하고, 성장형질들과 통계적 연관성을 분석하였다. 조사된 5종의 SNP 좌위에서 모두 다형성이 관찰되었으나, FABP3 g.-158T>C 염기치환에 대한 유전자형 중 T/T 동형접합자는 제주재래흑돼지에서는 발견되지 않았고, Landrace에서는 ADCYAP1R1의 intron 2 337 G/G 동형접합자가 발견되지 않았다. ADCYAP1R1 유전자형은 3주령체중, 20주령체중, FABP3 유전자의 g.-135delT에 대한 유전자형은 후기일당증체량에 고도의 유의차를 보였고(P<0.01), g.-158T>G 유전자형은 성장초기단계의 체중, 20주령체중, 후기일당증체량에 대해 고도의 유의차를 나타내었다(P<0.01). MC4R은 초기일당증체량의 차이에 의해 10주령체중의 유의차를 보였고(P<0.05), 후기일당증체량과도 고도의 유의차를 나타내었다(P<0.01). F2의 체장은 ADCYAP1R1, MC4R, MYL2 유전자형에 대한 통계적 유의차를 나타내었으나(P< 0.05), 이중 MC4R의 유전자형에 따른 체장의 차이가 가장 큰 폭으로 확인되었다. 본 연구의 결과들은 제주재래흑돼지와 관련된 다원교잡체계를 이용한 양돈산업에서 성장형질의 생산성 향상을 위한 제주재래흑돼지 종모돈의 선발이나, 제주재래흑돼지 품종 자체의 품종개량을 위한 분자육종체계 구축에서 유용한 기초자료가 될 것으로 사료된다.

• Parasites, Hosts and Diseases
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• 제23권1호
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• pp.139-150
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• 1985

1984년 5월부터 11월까지 6개월간 경북지역에서 출현하는 모기의 종류와 그 생태를 조사함과 아울러, 유문등에 의한 매개모기의 계절적 출현 소장을 관찰하였다. 조사 기간중에 채집된 모기의 종류는 4층 14종이었으며, 기중 Culex tritaeniorhynchus Giles(작은 빨간집모기), Anopheles sinensis Wiedemann(중국얼룩날개모기), Culex pipiens pallets Coquillett(빨간집모기), 3종이 우점종으로 전 채집수의 95.5%를 차지하였다. 지역별로는 경산군에서 채집한 모기 34,571마리 중 C. tritaeniorhynchus가 44.9%로 가장 많았고. 그 다음은 34.3%를 나타내는 분. pipiens pallens였으며, A. sinensis는 18.9%로 중간치를 나타내었다. 이에 반하여 뇌염환자의 다발성 지역인 안강읍에서 채집한 모기 13,075마리 중, A. sinensis가 75.8%로 가장 많았고, C. tritaenorhynchus는 23.2%, C. pipiens pallens는 0.6%였다. 조사지역에서 C. tritaeniorhynchus를 처음으로 채집할 수 있는 시기는 6월 중순이었으며, 이 기간중 기온은 $21.9^{\circ}C~25.0^{\circ}C$, 습도는 60~80%, 그 밀도(Average number of female mosquito/trap.night)는 1.2마리였다. C. tritaeniorhynchus의 최대 밀도시기는 8월 하순에서 9월 초순 사이었으며, 그 기간중 기온은 $23.0^{circ}C~27.9^{\circ}C$, 습도는 64~88%였고, 최대밀도는 1,008.4마리였다. 매개모기의 야간 흡혈 활동성을 알아보기 위해 7월 17~18일과 8월 3~4일 2회에 걸쳐 저녁 19시부터 그 다음 날 아침 6시까지 1시간 간격으로 모기를 채집하였다. C. tritaeniorhynchus의 활동이 가장 활발한 시간은 21시에서 22시, 24시에서 1시 사이였으며, 아침 5시 이후에는 한마리도 채집할 수 없었다. 조사 지역에서 채집한 유충은 사육실로 옮겨 종을 동정 하였던 바, 4층 14종이었으며, 매년 사회적으로 문제가 되는 뇌염 매개종인 C. tritaeniorhynchus의 유충서식처는 답, 옹덩이, 작은 연못, 늪, 미나리논 및 소택지 등이었다. 이상의 성적으로 미루어 보아 뇌염 매개 모기, C. tritaeniorhynchus는 6월 중순에 처음으로 출현하며, 8월 하순과 9월 초순에 최대 밀도를 나타내였고, 10월 중순 부터는 채집할 수 없음을 알았다.