• Title/Summary/Keyword: breed classification

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Case-Selective Neural Network Model and Its Application to Software Effort Estimation

  • Jun, Eung-Sup
    • Proceedings of the Korea Information Processing Society Conference
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    • 2001.10a
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    • pp.363-366
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    • 2001
  • It is very difficult to maintain the performance of estimation models for the new breed of projects since the computing environment changes so rapidly in terms of programming languages, development tools, and methodologies. So, we propose to use the relevant cases for a neural network model, whose cost is the decreased number of cases. To balance the relevance and data availability, the qualitative input factors are used as criteria of data classification. With the data sets that have the same value for certain qualitative input factors, we can eliminate the factors from the model making reduced neural network models. So we need to seek the optimally reduced neural network model among them. To find the optimally case-selective neural network, we propose the search techniques and sensitivity analysis between data points and search space.

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Taxonomy of Asian Geranium L.(Geraniaceae) based on fruit and seed morphology

  • Park, Seon-Joo;Park, Hong-Duok
    • Journal of Environmental Science International
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    • v.11 no.2
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    • pp.121-130
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    • 2002
  • Compare to investigate the taxonomic utility of infragenera system and interspecific of Asian Geranium, we examined the fruit and seed morphology from 35 taxa. The fruit shape and seed's dispersal way did so that may divide subgenus or some part section to do could reason evolutionary trends. That is, at seed dispersal, the awns of section Geranium of subgenus Geranium, ramains attached at the top of rostrum, though fairy easily broken off, because seed increases awn's elasticity by diffusive way, it is long characteristic seed\`s dispersal distance, and subgenus Robertium observed that seed dispersal distance is short because it is no awn's elasticity by way that seed dispersal is gone as awn drops with rostrum. Also, section Geranium of subgenus Geranium and subgenus Robertium act role that awn keeps temporarily breed swerving with mericarp instead of bristle because section Tuberosa of subgenus Geranium is not bristled function that keep temporarily breed because mericarp bristled on base at seed dispersal do while. Therefore, is thought that is talon that when consider formation's development and function regarding this seed dispersal function, subgenus Geraniuum evolves more than subgenus Robertium. Seed morphology can divide by 2 subgenera(Geranium, Robertium) according to pattern of seed coat. and Seed's morphology characteristic(whole shape, color, form of seed apical and base, micropyle area, hilum area, chalaza, and position of seed hilum area), can distinguish some species, but is thought that is not reasonable as for discernment characteristic form and nature by repetition of characteristic form and nature. Especially, infrasection do in fruit and seed's morphology that is handling in this research that know to argue classification system and relationship by repetition of characteristic form and nature difficult. To all reliable truth, cytological, ecological, embryology, and molecular genetics research about talon is considered that should be achieved section Geranium that do not handle yet.

Haplogroup Classification of Korean Cattle Breeds Based on Sequence Variations of mtDNA Control Region

  • Kim, Jae-Hwan;Lee, Seong-Su;Kim, Seung Chang;Choi, Seong-Bok;Kim, Su-Hyun;Lee, Chang Woo;Jung, Kyoung-Sub;Kim, Eun Sung;Choi, Young-Sun;Kim, Sung-Bok;Kim, Woo Hyun;Cho, Chang-Yeon
    • Asian-Australasian Journal of Animal Sciences
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    • v.29 no.5
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    • pp.624-630
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    • 2016
  • Many studies have reported the frequency and distribution of haplogroups among various cattle breeds for verification of their origins and genetic diversity. In this study, 318 complete sequences of the mtDNA control region from four Korean cattle breeds were used for haplogroup classification. 71 polymorphic sites and 66 haplotypes were found in these sequences. Consistent with the genetic patterns in previous reports, four haplogroups (T1, T2, T3, and T4) were identified in Korean cattle breeds. In addition, T1a, T3a, and T3b sub-haplogroups were classified. In the phylogenetic tree, each haplogroup formed an independent cluster. The frequencies of T3, T4, T1 (containing T1a), and T2 were 66%, 16%, 10%, and 8%, respectively. Especially, the T1 haplogroup contained only one haplotype and a sample. All four haplogroups were found in Chikso, Jeju black and Hanwoo. However, only the T3 and T4 haplogroups appeared in Heugu, and most Chikso populations showed a partial of four haplogroups. These results will be useful for stable conservation and efficient management of Korean cattle breeds.

Quality grading of Hanwoo (Korean native cattle breed) sub-images using convolutional neural network

  • Kwon, Kyung-Do;Lee, Ahyeong;Lim, Jongkuk;Cho, Soohyun;Lee, Wanghee;Cho, Byoung-Kwan;Seo, Youngwook
    • Korean Journal of Agricultural Science
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    • v.47 no.4
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    • pp.1109-1122
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    • 2020
  • The aim of this study was to develop a marbling classification and prediction model using small parts of sirloin images based on a deep learning algorithm, namely, a convolutional neural network (CNN). Samples were purchased from a commercial slaughterhouse in Korea, images for each grade were acquired, and the total images (n = 500) were assigned according to their grade number: 1++, 1+, 1, and both 2 & 3. The image acquisition system consists of a DSLR camera with a polarization filter to remove diffusive reflectance and two light sources (55 W). To correct the distorted original images, a radial correction algorithm was implemented. Color images of sirloins of Hanwoo (mixed with feeder cattle, steer, and calf) were divided and sub-images with image sizes of 161 × 161 were made to train the marbling prediction model. In this study, the convolutional neural network (CNN) has four convolution layers and yields prediction results in accordance with marbling grades (1++, 1+, 1, and 2&3). Every single layer uses a rectified linear unit (ReLU) function as an activation function and max-pooling is used for extracting the edge between fat and muscle and reducing the variance of the data. Prediction accuracy was measured using an accuracy and kappa coefficient from a confusion matrix. We summed the prediction of sub-images and determined the total average prediction accuracy. Training accuracy was 100% and the test accuracy was 86%, indicating comparably good performance using the CNN. This study provides classification potential for predicting the marbling grade using color images and a convolutional neural network algorithm.

The Estimation of Soil Erosion Factors of Cutting Slope using RC Helicopter Image (무선조종 헬기 영상을 이용한 절취단면의 토사유출인자 산정)

  • Cho, Yong-Jae;Lee, Young-Do;Jung, Beom-Seok
    • Journal of the Korean Association of Geographic Information Studies
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    • v.10 no.2
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    • pp.82-90
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    • 2007
  • Recently, the development project is conducting disaster effect estimation to breed disaster, and cope these disaster beforehand provoking soil erosion and flood. Therefore, it is important to analyze and reduce of these disaster. In this study, it is intended to extract LS and C factors of soil erosion through the digital image. The photogrammetric technique, which employs the Remote Control Helicopter equipped with a non-metric digital camera, was used for the efficient survey and analysis of cutting slopes. As a result, we obtain more objective value of soil erosion factor using digital image.

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Investigation of Microsatellite Markers for Traceability and Individual Discrimination of Korean Native Ducks (한국 토종오리의 개체 식별 및 품종 구분을 위한 Microsatellite 마커 탐색)

  • Seo, Dong Won;Sultana, Hasina;Choi, Nu Ri;Kim, Yeon Su;Jin, Shil;Heo, Kang Nyeong;Jin, Seon Deok;Lee, Jun Heon
    • Korean Journal of Poultry Science
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    • v.42 no.1
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    • pp.1-8
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    • 2015
  • Recently, duck meat consumption has been rapidly increased because consumers recognized duck meat for healthy food. In relation to this, Korean duck industry need to develop Korean native duck (KND) breed for both conservation perspective and self-sufficient of the breeding stocks. In this study, 24 microsatellite (MS) markers were investigated for classification of KND and commercial duck (CD) breeds in the Korean market. Using these MS markers, the calculated number of alleles (K), expected heterozygosity (He) values and polymorphic information contents (PIC) were 1~16, 0~0.865 and 0~0.841, respectively. Also, the expected probability of identical values in random individuals (PI), random sib ($PI_{sib}$) and random half-sib ($PI_{half-sib}$) were estimated as $1.64{\times}10^{-16}$, $2.60{\times}10^{-7}$ and $1.30{\times}10^{-12}$, respectively. The results indicated that the expected probabilities of identity powers were enough for the individual identification. However, KND and CD breeds were not fully discriminated well using the 24 MS markers, which may CD and KND has shared same origin or crossbred. Therefore, further studies will be ultimately needed for developing a genetically pure line of KND breed even though the DNA markers used. Finally, these results will provide useful information for individual traceability system in ducks.

Analysis of the Genotype Distribution in Cattle Breeds Using a Double Mismatched Primer Set that Discriminates the MC1R Dominant Black Allele (소 MC1R 우성흑모색 대립인자를 구분하는 변형 프라이머를 이용한 소 품종들의 유전자형 분포 분석)

  • Han, Sang-Hyun;Kim, Young-Hoon;Cho, In-Cheol;Jang, Byoung-Gui;Ko, Moon-Suck;Jung, Ha-Yeon;Lee, Sung-Soo
    • Journal of Animal Science and Technology
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    • v.50 no.5
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    • pp.633-640
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    • 2008
  • With a double mismatch primer set designed for amplifying the modified DNA sequence fragments, bovine melanocortin-1 receptor(MC1R) gene encoded in Extension locus which plays a critical role in coat color development was analyzed using polymerase chain reaction mediated restriction fragment length polymorphism(PCR-RFLP). Amplified PCR fragments were successfully discriminated with combining the MspI- and AluI-RFLP into three major alleles(ED, E+, and e), directly related to bovine coat color phenotypes. The genotyping results showed that Jeju black cattle contained three MC1R alleles, but yellowish-red colored Hanwoo and bridle colored Korean Brindle cattle did not contained the dominant black allele ED. However, two dominant black-colored cattle breeds, Holstein and Angus, contained the ED allele over 96% in frequency. Hanwoo×Holstein F1 and Hanwoo×Angus F1 crossbred calves showed ED/e MC1R genotypes, and uniformly black coat color. the results suggested that this MC1R genotyping method be useful in allele discrimination for bovine MC1R gene which used for breed classification and characterization, as one of the important genetic markers, using combination of MspI- and AluI-RFLP for modified PCR product amplified with a newly designed double mismatch primer set.

Degummed crude canola oil, sire breed and gender effects on intramuscular long-chain omega-3 fatty acid properties of raw and cooked lamb meat

  • Flakemore, Aaron Ross;Malau-Aduli, Bunmi Sherifat;Nichols, Peter David;Malau-Aduli, Aduli Enoch Othniel
    • Journal of Animal Science and Technology
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    • v.59 no.8
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    • pp.17.1-17.13
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    • 2017
  • Background: Omega-3 long-chain (${\geq}C_{20}$) polyunsaturated fatty acids (${\omega}3$ LC-PUFA) confer important attributes to health-conscious meat consumers due to the significant role they play in brain development, prevention of coronary heart disease, obesity and hypertension. In this study, the ${\omega}3$ LC-PUFA content of raw and cooked Longissimus thoracis et lumborum (LTL) muscle from genetically divergent Australian prime lambs supplemented with dietary degummed crude canola oil (DCCO) was evaluated. Methods: Samples of LTL muscle were sourced from 24 first cross ewe and wether lambs sired by Dorset, White Suffolk and Merino rams joined to Merino dams that were assigned to supplemental regimes of degummed crude canola oil (DCCO): a control diet at 0 mL/kg DM of DCCO (DCCOC); 25 mL/kg DM of DCCO (DCCOM) and 50 mL/kg DCCO (DCCOH). Lambs were individually housed and offered 1 kg/day/head for 42 days before being slaughtered. Samples for cooked analysis were prepared to a core temperature of $70^{\circ}C$ using conductive dry-heat. Results: Within raw meats: DCCOH supplemented lambs had significantly (P < 0.05) higher concentrations of eicosapentaenoic (EPA, $20:5{\omega}3$) and EPA + docosahexaenoic (DHA, $22:6{\omega}3$) acids than those supplemented with DCCOM or DCCOC; Dorset sired lambs contained significantly (P < 0.05) more EPA and EPA + DHA than other sire breeds; diet and sire breed interactions were significant (P < 0.05) in affecting EPA and EPA + DHA concentrations. In cooked meat, ${\omega}3$ LC-PUFA concentrations in DCCOM (32 mg/100 g), DCCOH (38 mg/100 g), Dorset (36 mg/100 g), White Suffolk (32 mg/100 g), ewes (32 mg/100 g) and wethers (33 mg/100 g), all exceeded the minimum content of 30 mg/100 g of edible cooked portion of EPA + DHA for Australian defined 'source' level ${\omega}3$ LC-PUFA classification. Conclusion: These results present that combinations of dietary degummed crude canola oil, sheep genetics and culinary preparation method can be used as effective management tools to deliver nutritionally improved ${\omega}3$ LC-PUFA lamb to meat consumers.

Genetic Composition of Korean Native Chicken Populations - National Scale Molecular Genetic Evaluation Based on Microsatellite Markers (초위성체 표지로 본 한국 재래닭 집단의 분자유전학적 구성)

  • Lee, Poong-Yeon;Yeon, Seong-Heum;Kim, Jae-Hwan;Ko, Yeoung-Gyu;Son, Jun-Kyu;Lee, Hee-Hoon;Cho, Chang-Yeon
    • Korean Journal of Poultry Science
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    • v.38 no.2
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    • pp.81-87
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    • 2011
  • The study was conducted to select and optimize microsatellite (MS) markers for evaluate Korean Native Chicken (KNC) breeds in order to provide standard for the classification and breed definition of the indigenous breeds. The study also aimed to characterize and classify each KNC populations for inventory and management of avian genetic resources. A total of 462 chickens from 11 populations of chicken breeds including eight KNC breeds and three commercial chicken breeds were analyzed with 19 MS markers. KNC breeds, especially Long-Tail Chicken breeds, formed separate cluster from those commercial chicken breeds. Genetic distances between KNC populations (0.11~0.18) were relatively shorter. Genetic uniformity of KNC (except KNCR breed) (0.86~0.88) were higher than that of commercial breeds (except Cornish) (0.95~0.97). On the other hand, genetic uniformity of KNC Long Tail (KNCLT) were relatively higher (0.91~0.97). The result can be used to evaluate and manage animal genetic resources at national scale.

BEEF MEAT TRACEABILITY. CAN NIRS COULD HELP\ulcorner

  • Cozzolino, D.
    • Proceedings of the Korean Society of Near Infrared Spectroscopy Conference
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    • 2001.06a
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    • pp.1246-1246
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    • 2001
  • The quality of meat is highly variable in many properties. This variability originates from both animal production and meat processing. At the pre-slaughter stage, animal factors such as breed, sex, age contribute to this variability. Environmental factors include feeding, rearing, transport and conditions just before slaughter (Hildrum et al., 1995). Meat can be presented in a variety of forms, each offering different opportunities for adulteration and contamination. This has imposed great pressure on the food manufacturing industry to guarantee the safety of meat. Tissue and muscle speciation of flesh foods, as well as speciation of animal derived by-products fed to all classes of domestic animals, are now perhaps the most important uncertainty which the food industry must resolve to allay consumer concern. Recently, there is a demand for rapid and low cost methods of direct quality measurements in both food and food ingredients (including high performance liquid chromatography (HPLC), thin layer chromatography (TLC), enzymatic and inmunological tests (e.g. ELISA test) and physical tests) to establish their authenticity and hence guarantee the quality of products manufactured for consumers (Holland et al., 1998). The use of Near Infrared Reflectance Spectroscopy (NIRS) for the rapid, precise and non-destructive analysis of a wide range of organic materials has been comprehensively documented (Osborne et at., 1993). Most of the established methods have involved the development of NIRS calibrations for the quantitative prediction of composition in meat (Ben-Gera and Norris, 1968; Lanza, 1983; Clark and Short, 1994). This was a rational strategy to pursue during the initial stages of its application, given the type of equipment available, the state of development of the emerging discipline of chemometrics and the overwhelming commercial interest in solving such problems (Downey, 1994). One of the advantages of NIRS technology is not only to assess chemical structures through the analysis of the molecular bonds in the near infrared spectrum, but also to build an optical model characteristic of the sample which behaves like the “finger print” of the sample. This opens the possibility of using spectra to determine complex attributes of organic structures, which are related to molecular chromophores, organoleptic scores and sensory characteristics (Hildrum et al., 1994, 1995; Park et al., 1998). In addition, the application of statistical packages like principal component or discriminant analysis provides the possibility to understand the optical properties of the sample and make a classification without the chemical information. The objectives of this present work were: (1) to examine two methods of sample presentation to the instrument (intact and minced) and (2) to explore the use of principal component analysis (PCA) and Soft Independent Modelling of class Analogy (SIMCA) to classify muscles by quality attributes. Seventy-eight (n: 78) beef muscles (m. longissimus dorsi) from Hereford breed of cattle were used. The samples were scanned in a NIRS monochromator instrument (NIR Systems 6500, Silver Spring, MD, USA) in reflectance mode (log 1/R). Both intact and minced presentation to the instrument were explored. Qualitative analysis of optical information through PCA and SIMCA analysis showed differences in muscles resulting from two different feeding systems.

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