• 제목/요약/키워드: binary vector

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Agrobacterium tumefaciens에 의한 Microtuber 감자 (Solanum tuberosum) 절편(切片)의 유전적(遺傳的) 형질전환(形質轉換)에 관한 연구(硏究) (Genetic Transformation of Microtuber Disk of Potato(Solanum Tuberosum) by Agrobacterium Tumefaciens)

  • 이영복;성봉재;이은경;이기원;최관삼
    • 농업과학연구
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    • 제20권2호
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    • pp.133-144
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    • 1993
  • 본(本) 연구(硏究)는 Agrobacterium tumefaciens을 binary vector system(C' 121, A' 121, L' 121)의 방법(方法)으로 처리(處理)하여 감자(Solanum tuberosum cv. Sumi)의 일반종서(一般種薯), microtuber 및 엽육조직(葉肉組織)과 줄기조직(組織)의 형질전환(形質轉換)을 유기(誘起)하기 위한 실험(實驗)을 수행(修行)하였다. Binary vector의 transconjugant는 triparental mating method에 의해 작성(作成)하였고, 이에 의해 만들어진 C'121, A' 121 및 L' 121을 cocultivation 처리방법(處理方法)으로 감자조직(組織)의 절편(切片)에 접종처리(接種處理)하고, cytokinin과 auxin을 여러 가지 농도(濃度)로 조합(組合)하여 첨가(添加)한 MS배지(培地)에서 배양(培養)한 결과(結果) C' 121과 A' 121 접종구(接種區)에서는 BA, NAA 및 2.4-D 복합처리시(複合處理時) NAA보다는 2,4-D의 농도(濃度)가 높아짐에 따라 callus의 분화(分化)가 증가(增加)되었고, 일반종서(一般種薯)에서의 callus는 쉽게 갈변(褐變)하여 증식(增殖)이 잘 되지 않았다. 또한, L' 121의 접중구(接種區)에서는 microtuber나 일반종서(一般種薯)에서도 거의 callus 형성(形成)되지 않았다. 2,4-D 단용처리시(單用處理時) C' 121과 A' 121 모두 높은 callus 분화율(分化率)을 나타냈지만 NAA 단용처리시(單用處理時)에는 2,4-D보다는 저조(低調)한 callus분화(分化)를 보였다. 2iP를 BA 대신(代身) 사용(使用)하였을 경우(境遇) L' 121에서도 높은 callus 분화율(分化率)을 보였고, callus의 증식(增殖)도 잘 이루어졌다. BA 1mg/l+NAA 0.01mg/l+Zeatin 0.5mg/l처리구(處理區)에서의 callus를 BA 2mg/l+2,4-D 1mg/l의 MS배지(培地)에 계대배양(繼代培養)한 결과(結果) embryo 및 shoot가 형성(形成)되었다. 기내배양(器內培養)한 엽육조직(葉肉組織)과 줄기조직(組織)은 Zeatin 2mg/l+NAA 0.01mg/l+GA 0.1mg/l혼합(混合) 처리구(處理區)에서 세가지 conjugants 모두에서 비교적(比較的) 높은 callus 형성율(形成率)을 보였다. 각 처리구(處理區)에서 얻어진 callus는 계대배양(繼代培養)에 의해 현재(現在)도 생육(生育)이 왕성(旺盛)하게 이루어지고 있어 빠르고, 효율적(效率的)인 식물체(植物體) 분화(分化)에 관한 연구(硏究)가 계속 수행(修行)되어질 것이다.

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단어 중의성 해소를 위한 SVM 분류기 최적화에 관한 연구 (A Study on Optimization of Support Vector Machine Classifier for Word Sense Disambiguation)

  • 이용구
    • 정보관리연구
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    • 제42권2호
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    • pp.193-210
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    • 2011
  • 이 연구는 단어 중의성 해소를 위해 SVM 분류기가 최적의 성능을 가져오는 문맥창의 크기와 다양한 가중치 방법을 파악하고자 하였다. 실험집단으로 한글 신문기사를 적용하였다. 문맥창의 크기로 지역 문맥은 좌우 3단어, 한 문장, 그리고 좌우 50바이트 크기를 사용하였으며, 전역문맥으로 신문기사 전체를 대상으로 하였다. 가중치 부여 기법으로는 단순빈도인 이진 단어빈도와 단순 단어빈도를, 정규화 빈도로 단순 또는 로그를 취한 단어빈도 ${\times}$ 역문헌빈도를 사용하였다. 실험 결과 문맥창의 크기는 좌우 50 바이트가 가장 좋은 성능을 보였으며, 가중치 부여 방법은 이진 단어빈도가 가장 좋은 성능을 보였다.

Agroinfiltration-based Potato Virus X Replicons to Dissect the Requirements of Viral Infection

  • Park, Sang-Ho;Kim, Kook-Hyung
    • The Plant Pathology Journal
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    • 제22권4호
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    • pp.386-390
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    • 2006
  • Extensive research of the Potato virus X(PVX) has been performed in in vitro transcription system using the bacteriophage T7 promoter. We constructed an efficient T-DNA based binary vector, pSNU1, and modified vectors carrying PVX replicons. The suitability of the construct to transiently express PVX RNA using Agrobacterium tumefaciens was tested by analysis of infectivity in plants. The expressed PVX RNA was infectous and systemically spread in three plant species including Nicotiana benthamiana, N. tabacum cv. Xanthi-nc, and Capsicum annuum cv. Chilsungcho. The PVX full length construct, pSPVXp31, was caused severe mosaic symptoms on N. benthamiana, severe necrotic lesions on C. annuum while milder symptoms and delayed mosaic symptoms were appeared on the systemic leaves on N. tabaccum. RT-PCR analysis confirmed the presence of PVX RNAs on both inoculated and systemic leaves in all three plant species tested. Our results indicated that PVX replicons were efficiently expressed PVX RNA in at least three tested species. Further investigation win be needed to elucidate the mechanism of PVX replication, translation, movement and assembly/disassembly processes.

Acetosyringone을 이용한 효율적인 White Clover의 형질전환 (Efficient Transformation of Trifolium repens L. Using Acetosyringone)

  • 권태호
    • 한국자원식물학회지
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    • 제10권2호
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    • pp.107-113
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    • 1997
  • 화이트 클로버의 배축, 잎, 미숙배 유래의 embryogenic callus에 식물 binary vector인 pBI121을 포함하는 A. tumefaciens LBA4404를 접종하여 효과적으로 화이트 클로버를 형질전환시켰다. A. tumefaciens를 이용한 화이트 클로버의 형질전환은 acetosyringone을 사용함으로써 품종간의 차이가 없이 배발생 캘러스에서 16-19%를 보였다. 재분화 식물체의 PCR 및 Northern 분서글 통하여 형질 전환된 화이트 클로버의 염색체내에 GUS 유전자가 안정되게 도입되었고 식물체내에서 mRAN로 발현됨을 확인하였다. 또한, GUS 유전자가 식물체내에서 단백질로 발현됨을 확인하기 위하여 형질 전환되어진 화이트 클로버부터 단백질을 추출하고 분광분석법에 의하여 GUS의 활성을 측정하였으며, 시료간에 약간의 차이는 있으나 유의적인 GUS 활성을 확인하였다.

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Single Somatic Embryogenesis from Transformant with Proteinase II Gene in Panax ginseng C.A. Meyer

  • Yang, Deok-Chun;Kim, Se-Young;Rho, Yeong-Deok;Kim, Moo-Sung
    • Plant Resources
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    • 제6권3호
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    • pp.205-210
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    • 2003
  • Ginseng(Panax ginseng C.A. Meyer) is a perennial herbaceous plant which grows very slowly. It takes about 3 to 4 years from seeding to collecting the ripe seeds and the ginseng propagation is very difficult. and so, it is very difficult to breed ginseng plant. Ginseng tissue culture was started from at 1960, and ginseng commercial product by in vitro callus culture was saled, however upto now, regenerants were not planted to soil normally. Recently, plant genetic engineering to produce transgenic plants by introducing useful genes has been advanced greatly. In a present paper, transformation of ginseng plants was achieved by co-cultivation with Agrobacterium harboring the binary vector coding Proteinase-II gene, which confer resistant or tolerant to insect pests, The binary vector for transformation was constructed with disarmed Ti-plasmid and with double 35S promoter. The NPT II gene and introduced genes of the transgenic ginseng plants were successfully identified by the PCR. Especially the transgenic ginseng plants were regenerated using new techniques such as repetitive single somatic embryogenesis.

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A Watermarking Scheme for Shapefile-Based GIS Digital Map Using Polyline Perimeter Distribution

  • Huo, Xiao-Jiao;Lee, Suk-Hwan;Kwon, Seong-Geun;Moon, Kwan-Seok;Kwon, Ki-Ryong
    • 한국멀티미디어학회논문지
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    • 제14권5호
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    • pp.595-606
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    • 2011
  • This paper proposes a robust watermarking scheme for GIS digital map by using the geometric properties of polyline and polygon, which are the fundamental components in vector data structure. In the proposed scheme, we calculate the lengths and the perimeters of all polylines and polygons in a map and cluster them to a number of groups. Then we embed the binary watermark by changing the mean of lengths and perimeters in an embedding group. For improving the safety and robustness, we permute the binary watermark through PRNS(pseudo-random number sequence) processing and embed it repeatedly in a model. Experimental results verified that our scheme has a good invisibility, safety and robustness to various geometric attacks and also our scheme needs not the original map in the extracting process of watermark.

Improved Feature Selection Techniques for Image Retrieval based on Metaheuristic Optimization

  • Johari, Punit Kumar;Gupta, Rajendra Kumar
    • International Journal of Computer Science & Network Security
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    • 제21권1호
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    • pp.40-48
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    • 2021
  • Content-Based Image Retrieval (CBIR) system plays a vital role to retrieve the relevant images as per the user perception from the huge database is a challenging task. Images are represented is to employ a combination of low-level features as per their visual content to form a feature vector. To reduce the search time of a large database while retrieving images, a novel image retrieval technique based on feature dimensionality reduction is being proposed with the exploit of metaheuristic optimization techniques based on Genetic Algorithm (GA), Extended Binary Cuckoo Search (EBCS) and Whale Optimization Algorithm (WOA). Each image in the database is indexed using a feature vector comprising of fuzzified based color histogram descriptor for color and Median binary pattern were derived in the color space from HSI for texture feature variants respectively. Finally, results are being compared in terms of Precision, Recall, F-measure, Accuracy, and error rate with benchmark classification algorithms (Linear discriminant analysis, CatBoost, Extra Trees, Random Forest, Naive Bayes, light gradient boosting, Extreme gradient boosting, k-NN, and Ridge) to validate the efficiency of the proposed approach. Finally, a ranking of the techniques using TOPSIS has been considered choosing the best feature selection technique based on different model parameters.

LS-SVM for large data sets

  • Park, Hongrak;Hwang, Hyungtae;Kim, Byungju
    • Journal of the Korean Data and Information Science Society
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    • 제27권2호
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    • pp.549-557
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    • 2016
  • In this paper we propose multiclassification method for large data sets by ensembling least squares support vector machines (LS-SVM) with principal components instead of raw input vector. We use the revised one-vs-all method for multiclassification, which is one of voting scheme based on combining several binary classifications. The revised one-vs-all method is performed by using the hat matrix of LS-SVM ensemble, which is obtained by ensembling LS-SVMs trained using each random sample from the whole large training data. The leave-one-out cross validation (CV) function is used for the optimal values of hyper-parameters which affect the performance of multiclass LS-SVM ensemble. We present the generalized cross validation function to reduce computational burden of leave-one-out CV functions. Experimental results from real data sets are then obtained to illustrate the performance of the proposed multiclass LS-SVM ensemble.

유전자 알고리즘을 결합한 Support Vector Machine의 화자인증에서의 성능분석 (Speaker Verification System Using Support Vector Machine with Genetic Algorithms)

  • 최우용;이경희;반성범
    • 대한전자공학회:학술대회논문집
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    • 대한전자공학회 2003년도 신호처리소사이어티 추계학술대회 논문집
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    • pp.557-560
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    • 2003
  • Voice is one of the promising biometrics because it is one of the most convenient ways human would distinguish someone from others. The target of speaker verification is to divide the client from imposters. Support Vector Machine(SVM) is in the limelight as a binary classifier, so it can work well in speaker verification. In this paper, we combined SVM with genetic algorithm(GA) to reduce the dimensionality of input feature. Experiments were conducted with Korean connected digit database using different feature dimensions. The verification accuracy of SVM with GA is slightly lower than that of SVM, but the proposed algorithm has greater strength in the memory limited systems.

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커널 함수를 도입한 새로운 추천 시스템 (A New Kernelized Approach to Recommender System)

  • 이제헌;황재필;김은태
    • 한국지능시스템학회논문지
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    • 제21권5호
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    • pp.624-629
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    • 2011
  • 본 논문에서는 커널 함수를 이용한 기법을 통한 추천 시스템을 제안한다. 제안된 추천 시스템은 기계 학습 기법을 이용하여 새로운 아이템에 대한 사용자의 선호도를 예측하고 예측된 결과를 바탕으로 사용자가 선호할만한 아이템들을 추천한다. 일반적으로 사용자의 평가 정보는 잡음이 포함되어 있고 일관성이 적으므로 잡음에 영향을 적게 받는 이원 분류기인 이중 마진 Lagrangian support vector machine (DMLSVM) 을 사용한다. 제안된 기법은 MovieLens 데이터베이스에 적용하였다. 또한 시뮬레이션을 통해 제안된 방법의 우수성을 확인하였다.