• Title/Summary/Keyword: an endemic species

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Distribution of Carex nakasimae Ohwi, a Korean endemic sedge (Cyperaceae)

  • CHUNG, Kyong-Sook;IM, Hyoung-Tak;MASAKI, Tomomi;HOSHINO, Takuji;LEE, Chang-Shook
    • Korean Journal of Plant Taxonomy
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    • v.50 no.2
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    • pp.239-246
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    • 2020
  • Carex nakasimae Ohwi (Cyperaceae) is an endemic species on the Korean peninsula. This study reports a new locality of the species, updating the distribution map. A new population of the species was found during field surveys in 2014 in a small swamp in Haman-gun, Gyeongsangnam-do province, located in the southeastern part of the Korean peninsula. In the flowering and fruiting periods of the species, the population is associated with ca. 91 vascular plant taxa from 40 families. To conserve the endemic species, maintaining the habitat is critical. Furthermore, taxonomic and phylogenetic positions of the species should be clarified to establish biological conservation strategies for the rare, endemic C. nakasimae.

Anatomy of Bupleurum latissimum Nakai (Apiaceae), an Endemic Species of Korea (한국특산식물 섬시호의 해부학적 연구)

  • Choi, Hyo-Jeung;Kim, Mu-Yeol;Heo, Kweon
    • Korean Journal of Medicinal Crop Science
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    • v.14 no.6
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    • pp.342-346
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    • 2006
  • Anatomical characters of the Bupleurum latissimum Nakai, an endemic species of Korea, were investigated to confirm its phylogenetic relationships. Compare to other species with anatomical characters, B. latissimum is very similar with B, euphorbioides and B, longeradiatum in point of lacking of pith in the stem, shape of involucres, number of vascular bundles in radical leaf and cauline leaf, and lacking stomata in adaxial leaf surface. The other hand, protruded pollen aperture character appears in B. latissimum and B. euphorbioides. On the based of anatomical characters, therefore, B. latissimum has closest relationships with B. euphorbioides and B. longeradiatum. It also needs molecular study including Asian species in order to confirm phylogenetic position and speciation process apparently.

Phylogenetic position of Carex splendentissima, a Korean endemic sedge (Cyperaceae)

  • CHUNG, Kyong-Sook;YANG, Sungyu;NAM, Bo-Mi
    • Korean Journal of Plant Taxonomy
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    • v.50 no.3
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    • pp.253-261
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    • 2020
  • Carex splendentissima U. Kang & J. M. Chung, endemic to the Korean peninsula, is characterized by staminate terminal spikes and glabrous elliptic perigynia. Based on its broad leaves, androgynous spikes, and tri-stigmatic features, the species has been placed in Carex sect. Siderostictae Franch. ex Ohwi, an East Asian section and a basal group in the genus. To clarify the monophyly and phylogenetic position of the species, a molecular study using the internal transcribed spacer region of nuclear ribosomal DNA and chloroplast DNA (trnL-F) data was conducted. The DNA sequence data of ten taxa in sect. Siderostictae and closely related taxa (two taxa in sect. Surculosae) with outgroups were analyzed based on maximum parsimony and maximum likelihood (ML) criteria. In the analyses, C. splendentissima was monophyletic and placed within the Siderostictae clade (sect. Siderostictae + two species of sect. Surculosae), forming a clade with C. ciliatomarginata and C. pachygyna (endemic to Japan). The clade (C. splendentissima + C. ciliatomarginata + C. pachygyna) shows evidence of diploidy. Furthermore, C. splendentissima is a sister to C. ciliatomarginata in the ML tree, and the two taxa have staminate terminal spikes. This study also updates the distribution of C. splendentissima and provides keys to the four Korean taxa in sect. Siderostictae. To conserve the endemic species C. splendentissima, further research on its genetic and ecological features should be conducted at the population level.

A report of the second chloroplast genome sequence in Veronica nakaiana (Plantaginaceae), an endemic species in Korea

  • LEE, Yae-Eun;LEE, Yoonkyung;KIM, Sangtae
    • Korean Journal of Plant Taxonomy
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    • v.51 no.1
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    • pp.109-114
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    • 2021
  • Veronica nakaiana Ohwi (Plantaginaceae) is an endemic taxon on Ulleungdo Island, Korea. We report the second complete chloroplast genome sequence of V. nakaiana. Its genome size is 152,319 bp in length, comprising a large single-copy of 83,195 bp, a small single-copy of 17,702 bp, and a pair of inverted repeat regions of 25,711 bp. The complete genome contains 115 genes, including 51 protein-coding genes, four rRNA genes, and 31 tRNA genes. When comparing the two chloroplast genomes of V. nakaiana, 11 variable sites are recognized: seven SNPs and four indels. Two substitutions in the coding regions are recognized: rpoC2 (synonymous substitution) and rpl22 (nonsynonymous substitution). In nine noncoding regions, one is in the tRNA gene (trnK-UUU), one is in the intron of atpF, and seven are in the intergenic spacers (trnH-GUG~psbA, trnK-UUU, rps16~trnQ-UUG, trnC-GCA~petN, psbZ~trnG-GCC, ycf3~trnS-GGA, ycf4~cemA, and psbB~psbT). The data provide the level of genetic variation in V. nakaiana. This result will be a useful resource to formulate conservation strategies for V. nakaiana, which is a rare endemic species in Korea.

Morphological and molecular identification of Alaria paradisea (Phaeophyceae, Laminariales) from the Kurile Islands

  • Klimova, Anna V.;Klochkova, Nina G.;Klochkova, Tatyana A.;Kim, Gwang Hoon
    • ALGAE
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    • v.33 no.1
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    • pp.37-48
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    • 2018
  • Alaria is the second largest genus of the Laminariales, which is distributed far into the northern Pacific and Atlantic oceans. Due to its high morphological plasticity, over 100 specific and sub-specific names have been used in Alaria, this has been tailored down to the present 17 species through morphological revision and molecular phylogenetic analysis. Endemic species of Alaria from Russian Far East have not been thoroughly revised since their original description, and few of them were confirmed using molecular data until recently. We carried out morphological and molecular studies on A. paradisea which is an endemic species distributed on the Kurile Islands, first described by Miyabe and Nagai in 1932 as Pleuropterum paradiseum. The range of morphological variability and its distribution was re-evaluated using the type specimen as well as other specimens. Analyses of partial mitochondrial cytochrome c oxidase subunit 1 and nuclear-encoded internal transcribed spacer sequences showed that A. paradisea nested within the genus Alaria, but differs morphologically from any other Alaria species in having additional sporophylls with a central midrib (${\beta}-sporophylls$). Our results showed that A. paradisea clearly belongs to the genus Alaria based on DNA data, although the key morphological character that was used to include this species to the genus Pleuropterum, ${\beta}-sporophylls$, is stable and distinguishes it from other Alaria species.

A Comparative Study on Zoology & Botany Name of South and North Korea Building Bio-information Database of North Korea (북한 생물정보 DB 구축에 의한 남북한 동·식물명 비교 연구)

  • Kim, Nam-Shin;Jin, Shi-Zhu;Jin, Ying-Hua;Jung, Song-Hie
    • Journal of the Korean Society of Environmental Restoration Technology
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    • v.22 no.6
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    • pp.27-39
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    • 2019
  • The object of this research is to compare zoology and botany name caused by language and science differences of South and North Korea since division. Biological data are collected North Korea biological information (flora and fauna, an illustrated flora and fauna book of North Korea, Etc.) and compared both side data based on national species list of korea, National Institute of Biological Resources. We could built 3,903 species of flora and 1,487 species flora on biological database. The criteria for comparative method is 5 types (korean name difference, scientific name difference, same species, similar species, North Korea endemic species). As a results, plants were identified korean name difference (911 species), scientific name difference (614 species), same species (880 species), North Korea endemic species (1,037 species) of 3,903 species, and animals were korean name difference (685 species), scientific name difference (104 species), same species (199 species), North Korea endemic species (226 species) of the 1,492 species. This results are expected to be in application with cooperation study for recovering bioinformatics differences of South and North Korea.

Analysis of genetic differentiation and population structure of the Korean-peninsula-endemic genus, Semisulcospira, using mitochondrial markers

  • Eun-Mi Kim;Yeon Jung Park;Hye Min Lee;Eun Soo Noh;Jung-Ha Kang;Bo-Hye Nam;Young-Ok Kim;Tae-Jin Choi
    • Fisheries and Aquatic Sciences
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    • v.25 no.12
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    • pp.601-618
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    • 2022
  • The genus Semisulcospira is an economically and ecologically valuable freshwater resource. Among the species, Semisulcospira coreana, Semisulcospira forticosta and Semisulcospira tegulata are endemic to the Korean peninsula and Semisulcospira gottschei is widespread in Asia. Therefore, maintenance and conservation of wild populations of these snails are important. We investigated the genetic diversity and population structure of Semisulcospira based on the mitochondrial cytochrome c oxidase subunit I (COI), NADH dehydrogenase subunit 4 (ND4), and combined mitochondrial DNA (COI + ND4) sequences. All four species and various genetic makers showed a high level of haplotype diversity and a low level of nucleotide diversity. In addition, Fu's Fs and Tajima's D neutrality tests were performed to assess the variation in size among populations. Neutrality tests of the four species yielded negative Fu's Fs and Tajima's D values, except for populations with one haplotype. The minimum spanning network indicated a common haplotype for populations of S. coreana, S. tegulata and S. gottschei, whereas S. forticosta had a rare haplotype. Also, genetic differences and gene flows between populations were assessed by analysis of molecular variance and using the pairwise fixation index. Our findings provided insight into the degree of preservation of the species' genetic diversity and could be utilized to enhance the management of endemic species.

Genetic Diversity and Structure of a Rare and Endemic, Spring Ephemeral Plant Corydalis filistipes Nakai of Ullung Island in Korea (울릉도 희귀.특산 식물 섬현호색의 유전적 다양성과 구조)

  • Kim, Jin-Seok;Yang, Byeong-Hoon;Chung, Jae-Min;Lee, Byeong-Cheon;Lee, Jae-Cheon
    • Journal of Ecology and Environment
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    • v.29 no.3
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    • pp.247-252
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    • 2006
  • For the spring ephemeral and myrmecochorous perennia, Corydalis filistipes Nakai (Fumariaceae), rare and narrow endemic to Ullung Island in Korea, genetic diversity and structure of 4 subpopulations of the species were investigated with allozyme markers. Levels of genetic diversity (A=1.73, $P_{95%}$=61..2%, Ho=0.201, He=0.167) were relatively lower than those of other endemic species with widespread distribution range, but considerably higher than other endemic species with similar life history traits isolated in island. The moderate level of genetic diversity within subpopulations in C. filistipes is characteristic of the species with predominantly outcrossing, myrmecochorous seed dispersal by dual function of the elaisome and mode of sexual and asexual reproduction by the cleistogamy. The analysis of fixation indices showed an overall excess of heterozygotes (mean $F_{IS}=-0.1889,\;F_{IT}=-0.1226$) relative to H-W expectations. About 5.6% of the total genetic variation was found among subpopulations ($F_{ST}$=0.0557). The strategies of reasonable conservation and management, and the maintenance mechanism of genetic diversity of Corydalis filistipes Nakai, endemic plant species in Korea were discussed.

Vascular Plant Diversity of Jeju Island, Korea

  • Kim, Chan-Soo
    • Korean Journal of Plant Resources
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    • v.22 no.6
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    • pp.558-570
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    • 2009
  • The vascular plants in Jeju composed of 21 families 62 genera, 190 species, 7 varieties with 197 taxa in Pteridophyta, 3 families 5 genera, 7 species, 3 forma with 10 taxa in gymnosperm (Coniferophyta) and 143 families 703 genera, 1,622 species, 114 varieties and 47 forma with 1,783 taxa in Endospermae. The total number of taxa was 1,990 consisting 167 families, 770 genera, 1,818 species, 121 varieties and 50 forma. Three families, 4 genera 4 species and 1 variety in Pteridophyta and 1 family, 1 genus I species, 1 forma of Coniferophyta were endemic to Jeju. Five families, 8 genera and 8 species in the Monocotyledonae of Endospermae and 23 families, 32 genera, 21 species, 16 varieties and 7 forma and 44 taxa in Cholipetalae, and 9 families, 24 genera, 12 species, 13 varieties and 7 forma, total 32 taxa in Sympetalae were endemic to Jeju. Total 90 taxa with 41 families, 69 genera, 46 species, 29 varieties and 15 forma were drawn up as endemic plants in Jeju. As the numbers show on, Jeju has more biodiversity especially plant diversity than any other places in Korea. It was an important region in regard to geographical position. The rarity on plants from Jeju has been assessed based on the IUCN red list categories and criteria at both regional and global levels. There was one species in each extinct (EX) and extinct in the Wild (EW). The EX and EW species were Rhododendron saisiuense Nakai (Ericaceae) and Asplenium antiquum Makino (Aspleniaceae), respectively. Three taxa, Rhododendron dauricum L. (Ericaceae), Lycopodium sieboldii Miq., and Lycopodiella cernua (L.) Serm (Lycopodiaceae) were species that is extinct in the region (RE). Sixty-one taxa were critically endangered (CR), 13 were endangered (EN), and 83 were vulnerable (VU) at regional level. The taxa listed on a Red List corresponds 26.9% of total taxa in Jeju. At global level, there were 19 taxa in CR, 4 in EN, and 1 in VU (Vulnerable) as the category of threat. The rest taxa (133 taxa) were classified as Least Concern (LC). According to the results of the assessment, conservation measures must be taken for total of 157 species that were categorized in threaten including one of EX, one of EW and three extinct in the region immediately. Of 157 species, 61 were CR, 13 are EN and 83 were VU.

A checklist of endemic plants on the Korean Peninsula II

  • Gyu Young CHUNG;Hyun-Do JANG;Kae Sun CHANG;Hyeok Jae CHOI;Young-Soo KIM;Hyuk-Jin KIM;Dong Chan SON
    • Korean Journal of Plant Taxonomy
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    • v.53 no.2
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    • pp.79-101
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    • 2023
  • Following recent taxonomic, distributional, and nomenclatural revisions, an updated checklist of endemic plants on the Korean Peninsula is needed. This study provides an updated checklist of vascular plants endemic to the Korean Peninsula and describes their distribution within administrative provinces. The revised checklist includes 373 endemic taxa (304 species, six subspecies, 49 varieties, and 14 nothospecies) from 179 genera and 64 families, representing 9.5% of the total native flora of the Korean Peninsula. Asteraceae (41 taxa), Ranunculaceae (29 taxa), Liliaceae s.l. (24 taxa), and Rosaceae (22 taxa) were the most widely represented families. Compared with the most recent checklist published in 2017, 39 taxa were excluded from the checklist; one taxon was excluded because it did not have a valid published name, seven taxa were excluded because their natural habitats extended to neighboring countries, four taxa were excluded because they were treated as a rank form, and 27 taxa were excluded because they had been identified as heterotypic synonyms of taxa distributed outside of the Korean Peninsula. Fifty-two new taxa were included based on the literature. This checklist will help to focus conservation efforts and provide a framework for research, protection, and policy implementation related to these endemic taxa.