• Title/Summary/Keyword: algal genera

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Taxonomy and nomenclature of the Conjugatophyceae (= Zygnematophyceae)

  • Guiry, Michael D.
    • ALGAE
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    • v.28 no.1
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    • pp.1-29
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    • 2013
  • The conjugating algae, an almost exclusively freshwater and extraordinarily diverse group of streptophyte green algae, are referred to a class generally known as the Conjugatophyceae in Central Europe and the Zygnematophyceae elsewhere in the world. Conjugatophyceae is widely considered to be a descriptive name and Zygnematophyceae ('Zygnemophyceae') a typified name. However, both are typified names and Conjugatophyceae Engler ('Conjugatae') is the earlier name. Additionally, Zygnemophyceae Round is currently an invalid name and is validated here as Zygnematophyceae Round ex Guiry. The names of orders, families and genera for conjugating green algae are reviewed. For many years these algae were included in the 'Conjugatae', initially used as the equivalent of an order. The earliest use of the name Zygnematales appears to be by the American phycologist Charles Edwin Bessey (1845-1915), and it was he who first formally redistributed all conjugating algae from the 'Conjugatae' to the orders Zygnematales and the Desmidiales. The family Closteriaceae Bessey, currently encompassing Closterium and Spinoclosterium, is illegitimate as it was superfluous when first proposed, and its legitimization is herein proposed by nomenclatural conservation to facilitate use of the name. The genus Debarya Wittrock, 1872 is shown to be illegitimate as it is a later homonym of Debarya Schulzer, 1866 (Ascomycota), and the substitute genus name Transeauina Guiry is proposed together with appropriate combinations for 13 species currently assigned to the genus Debarya Wittrock. The relationships between Mougeotia, Mougeotiopsis, Mougeotiella, and Transeauina require further resolution, as do many of the other genera referred to the Conjugatophyceae. Type species are designated for genera for which no types were formally selected previously. The number of currently described species of conjugating green algae in AlgaeBase is about 3,500, comprising about 10% of all algal species, with about one third of species referred to the Zygnematales and two-thirds to the Desmidiales. A corresponding 10% of all algal names at the species level and below have been applied to conjugating algae, although a large proportion of these are at the infraspecific level.

Spatio-temporal Characteristics of Cyanobacterial Communities in the Middle-downstream of Nakdong River and Lake Dukdong (낙동강 중, 하류 및 덕동호의 시·공간적 남조류 군집 특성)

  • Park, Hae-Kyung;Shin, Ra-Young;Lee, Haejin;Lee, Kyung-Lak;Cheon, Se-Uk
    • Journal of Korean Society on Water Environment
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    • v.31 no.3
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    • pp.286-294
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    • 2015
  • Temporal and spatial characteristics of cyanobacterial communities at the monitoring stations for Harmful Algal Bloom Alert System (HABAS) in Nakdong River and Lake Dukdong were investigated for two years (2013 to 2014). A total of 30 cyanobacterial species from 14 genera were found at the survey stations. Microcystis sp. showed maximum cell density in the total cyanobacterial community in August, 2014 at ND-2 and in September, 2013 at ND-3 station. Lynbya limnetica and Geitlerinema sp., non-target species for alert criteria showed maximum cell density at ND-1 (August, 2013) and Dam station of Lake Dukdong (September, 2014), respectively. Total cyanobacterial cell density and the relative abundance of four target genera (Microcystis, Anabaena, Aphanizomenon and Oscillatoria spp.) for alert criteria was relatively lower in the mesotrophic Lake Dukdong than at the eutrophic riverine stations of Nakdong River, indicating cyanobacterial density and the RA of target genera is affected by the trophic state of the monitoring stations. Simulating the alert system using phycocyanin concentration as an alert criterion resulted in the longer period of alert issued compared to the period of alert issued using the current criterion of harmful cyanobacterial cell density due to the influence of phycocyanin concentration from non-target cyanobacterial species.

Microalgae Detection Using a Deep Learning Object Detection Algorithm, YOLOv3 (딥러닝 사물 인식 알고리즘(YOLOv3)을 이용한 미세조류 인식 연구)

  • Park, Jungsu;Baek, Jiwon;You, Kwangtae;Nam, Seung Won;Kim, Jongrack
    • Journal of Korean Society on Water Environment
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    • v.37 no.4
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    • pp.275-285
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    • 2021
  • Algal bloom is an important issue in maintaining the safety of the drinking water supply system. Fast detection and classification of algae images are essential for the management of algal blooms. Conventional visual identification using a microscope is a labor-intensive and time-consuming method that often requires several hours to several days in order to obtain analysis results from field water samples. In recent decades, various deep learning algorithms have been developed and widely used in object detection studies. YOLO is a state-of-the-art deep learning algorithm. In this study the third version of the YOLO algorithm, namely, YOLOv3, was used to develop an algae image detection model. YOLOv3 is one of the most representative one-stage object detection algorithms with faster inference time, which is an important benefit of YOLO. A total of 1,114 algae images for 30 genera collected by microscope were used to develop the YOLOv3 algae image detection model. The algae images were divided into four groups with five, 10, 20, and 30 genera for training and testing the model. The mean average precision (mAP) was 81, 70, 52, and 41 for data sets with five, 10, 20, and 30 genera, respectively. The precision was higher than 0.8 for all four image groups. These results show the practical applicability of the deep learning algorithm, YOLOv3, for algae image detection.

Seasonal Variation of Phytoplankton and Environmental Factors in Kyungpo Lake (경포호의 식물플랑크톤과 환경요인의 계절적 변동)

  • 이은주;김형섭;이규송
    • Korean Journal of Environmental Biology
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    • v.18 no.1
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    • pp.95-104
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    • 2000
  • In order to elucidate chatracteristics of water quality and seasonal dynamics of phytoplankton community in Kyungpo lake, the weekly variation of algal population and 11 environmental factors were investigated from March 1998 to February 1999. A total 121 species of phytoplankton belonged to 57 genera, 4 genera 7 species of the Euglenophyceae, 1 genera 2 species of the Chrysophyceae, 2 genera 3 species of the Cryptophyceae, 1 genera 1 species of the Dinophyceae, 6 genera 9 species of the Cyanophyceae, 28 genera 78 species of the Bacillario-phyceae and 15 genera 21 species of the Chlorophyceae, was identified. Cryptomonas sp., Chamydomonas sp., Nitzschia frustulum, Oscillatoria sp., Lyngbya sp, and Dictyosphaerium pulchellum occurred successively as dominant phytoplankton species from March 1998 to February 1999. Density of phytoplankton cell number showed the peak in early April when Chlamydomoas sp. was dominated. The diversity index of phytoplankton community showed low values in the dominating period of Cryptomonas sp. and Chlamydomonas sp. The concentration of chlorophyll a fluctuated between 1.09 and 107.7$\mu\textrm{g}$ㆍ1$^{-1}$. Water temperature, salinity, DO, conduc tivity and SS were ranged 0.5-27.8$^{\circ}C$, 2.8-25.2 ppt, 4.62-19.21 mgO$_2$ㆍ1$^{-1}$, 5.33-34.76 mS/cm and 0.017-0.184 mgㆍ1$^{-1}$, respectively. Annual means of Secchi disc transparency was 36cm and thai of pH value was 8.5. The concentrations of PO$_4$-P was ranged 0.0012-0.077 mgㆍ1$^{-1}$ , and showed high value from August to October. The concentrations of NO$_2$-N, NO$_3$-N and NH$_4$-N was ranged 0.0011-0.1 mgㆍ1$^{-1}$, 0.074-3.33mgㆍ1$^{-1}$ and 0.0024-0.259 mgㆍ1$^{-1}$, respectively. Among environmental factors, water temperature was negatively correlated with DO, salinity and conductivity, DO was positively correlated with salinity and conductivity. Chlorophyll a, one of the indicies of eutropication in lake, was negatively correlated with NH$_4$-N. The cell density of Cryptomonas sp., which was the most dominant species in this lake, was negatively correlated with transparency. [Kyoungpo lake, Phytoplankton, Cryptomonas sp. , Chlamydomonas sp., Seasonal variation].

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Isolation of marine algicidal bacteria from surface seawater and sediment samples associated with harmful algal blooms in Korea (유해조류번성 주변의 해수와 침전물에서 살조균의 분리)

  • Kristyanto, Sylvia;Kim, Jaisoo
    • Korean Journal of Microbiology
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    • v.52 no.1
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    • pp.40-48
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    • 2016
  • This study mainly focused on isolation of marine algicidal bacteria associated with phytoplankton blooms and characterization of algicidal activity against harmful algae. Harmful algal blooms (HABs) found naturally in surface waters have caused many environmental problems worldwide. In this study, forty bacterial strains that have capability of inhibiting harmful algal growth were isolated from Masan Bay, Jinhae Bay, Dol Island, Jangmok Bay, and the Tongyeong Sea, Republic of Korea. The bacteria were screened furthermore for the characteristics on algicidal activities against Cochlodinium polykrikoides, Chattonella marina, Skeletonema costatum, Heterosigma akashiwo, Heterocapsa triquetra, Prorocentrum minimum, and Scrippsiella trochoidea. As a result, the algicidal bacteria that were screened from double over layer agar and microscopic counts tests belonged to genera Pseudomonas, Vibrio, Bacillus, Pseudoalteromonas, Ruegeria, Joostella, Marinomonas, Stakelama, Porphyrobacter, and Albirhodobacter. One of the most important HAB species is Co. polykrikoides and the strongest algicidal activity against the dinoflagellate was 94.00% after 6 h treatment with 10% bacterial culture filtrate. In this study, Marinomonas sp. M Jin 1-8, Stakelama sp. ZB Yeonmyeong 1-11 & 1-13, Porphyrobacter sp. M Yeonmyeong 2-22, and Albirhodobacter sp. 6-R Jin 6-1 were found to be as new genera of bacteria having anti-algal activity. These results suggest that these bacteria might play an important role in controlling phytoplankton blooms.

Freshwater Algae in the Upstream of the Yongsan River System(1) -on the Drinking Water Supplying Area of Kwangju Districts- (영산강 상류의 담수조류 분포에 관한 연구(1) - 광주지역 상수원을 중심으로 -)

  • 최민규;김백호;최규철
    • Journal of environmental and Sanitary engineering
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    • v.10 no.1
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    • pp.45-65
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    • 1995
  • Seasonal occurrences and dynamics on the freshwater algae were examined in the upstream of the Yongsan river system with the Kwangju service water area from 1993 to 1994. Three hundred and three taxi were totally collected and composed of 6 classes, 15 orders, 7 suborders, 31 families, 74 genera, 248 species, 48 varieties and 7 forma. Compositions in each algal class were divided in 136 taxi of Chlorophyceae(44.8% ), 109 taxi of Bacillariophyceae(36.0% ), 30 taxa of Cyanophyceae(10.1% ), 21 taxa of Euglenophyceae(6. 9% ),4 taxi of Chrysophyceae(1.3% ) and 3 taxa of Dinophyceae(1.0% ). The occurrence of taxa was a markedly decrease(-62) between summer and autumn, the critically increase(+43) between spring and summer. And also, it was indicated that the high frequency of taxa in summer, but the high standing biomass In winter in spite of low taxi. In general, it has much algal biomass in station 9 and 10, but low in station 4, 5 and 11, relatively. Through this survey, the major dominant taxa in algal biomass, Microcystis aeruginosa, Melosira varians, Synedra ulna and Navicula cryptocephala, they were all above 2.1×10$^{6}$ce11s/1, 13.2% of totals. There are about 10% of new emigrated taxa by season and they showed a remarkable succession. We may suggested that this system was well sustained for the habitat of freshwater algal community with low dominance and high diversity. Twenty three of nuisance algae including of Microcystis aeruginosa, Peridinium willei and Anabaena flos-aquae were distributed as if had low appearance. Of course, many of them were saprobiontic taxa, extraordinary growttung groups depend on organic loading in water system and also it was not showed severe algal blooming phenomenon.

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A chemosystematic investigation of selected Stichococcus-like organisms (Trebouxiophyta)

  • Van, Anh Tu;Karsten, Ulf;Glaser, Karin
    • ALGAE
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    • v.36 no.2
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    • pp.123-135
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    • 2021
  • The taxonomy of green microalgae relies traditionally on morphological traits but has been rapidly changing since the advent of molecular methods. Stichococcus Nägeli is a cosmopolitan terrestrial algal genus of the class Trebouxiophyceae that has recently been split into seven lineages, which, along with Pseudostichococcus, comprise the Stichococcuslike group; there is a need to further characterize these genera, since they are morphologically enigmatic. Here we used organic osmolytes as chemotaxonomic marker to verify the phylogenetic position of Stichococcus-like strains and were also able to exclude a strain hitherto identified as Gloeotila contorta from this group. Stichococcus-like organisms, including those recently revised, were characterized by the production of the polyol sorbitol and the disaccharide sucrose in high amounts, as is typical of Prasiola-clade algae. The results demonstrate that organic osmolyte chemotaxonomy can support green algal taxonomic designations as fundamental research.

Molecular Ecological Characterization of Wastewater Bacterial Communities in Response to Algal Growth (조류성장에 따른 하수 박테리아 군집 변화에 관한 분자생태학적 연구)

  • Lee, Ju-Youn;Lee, Jang-Ho;Park, Joon-Hong
    • Journal of Korean Society of Environmental Engineers
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    • v.33 no.11
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    • pp.847-854
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    • 2011
  • To deal with issues from global climate changes, renewable bioenergy has become important. Algae have been regarded as a good resource for biorefinery and bioenergy, and also have potential capability to remove nutrient and non-decompositional pollutants for wastewater advanced treatment. Although algal-bacterial ecological interaction would be a crucially important factor in using algae for wastewater advanced treatment and resource recovery from wastewater, very little is known about ecological interaction between algae and bacteria in a real wastewater environment. In this study, under a real municipal wastewater condition, we characterized wastewater pollutant treatability and bacterial communities in response to growth of Ankistrodesmus gracilis SAG278-2, which can grow in wastewater and has a high lipid contents. The growth of algal population using the wastewater was inhibited by increase in wastewater bacteria while bacterial survival and cellular decay rate were not influenced by the algal growth. Removals of recalcitrant organic matters and total nitrogen were improved in the presence of algal growth. According to T-RFLP and statistical analysis, algal growth affected time-course changes in bacterial community structures. The following 16S rRNA gene amplicon, cloning results showed that the algal growth changes in bacterial community structure, and that bacterial populations belonging to Sediminibacterium, Sphingobacterium, Mucilaginibacter genera were identified as cooperative with the algal growth in the wastewater.

Records of desmids (Chlorophyta) newly found in Korea

  • Kim, Han Soon
    • Journal of Ecology and Environment
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    • v.37 no.4
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    • pp.299-313
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    • 2014
  • The present study summarizes the taxonomic notes and korean distribution of 29 taxa of the desmids (Chlorophyta) collected from several swamps, reservoirs, rivers, and high land wetlands in South Korea from 2009 to 2013. All of these consisting of 9 genera (Tetmemorus 1 taxon, Pleurotaenium 5 taxa, Triploceras 1 taxon, Euastrum 7 taxa, Cosmarium 6 taxa, Staurastrum 5 taxa, Xanthidium 1 taxon, Hyalotheca 2 taxa, and Desmidium 1 taxon) are newly described in Korean freshwater algal flora. In this study, light microscopy of all of these are presented and briefly discussed with regard to their taxonomy, distribution and ecology within South Korea.

Taxonomic Review of families Botryococcaceae and Characiaceae, Order Chlorococcales, and Class Chlorophyceae in Korea

  • Kim, Yong Jae
    • Journal of Ecology and Environment
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    • v.36 no.4
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    • pp.327-338
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    • 2013
  • A study on Chlorococcal algae was carried out at 21 stations (ponds, swamps, reservoirs, lakes and rivers) from May 2011 to January 2012. The families of Botryococcaceae and Characiaceae of Chlorococcales were investigated to the extent of 8 genera, 20 species. Among them, 10 taxa are newly recorded in algal flora of Korea by Kim and Kim (2012) and this study reviewed about ; 1) Family Botryococcaceae: Dictyosphaerium elegans, D. reniforme, D. simplex, D. elongatum, 2) Family Characiaceae: Characium conicum, Ankyra ancora, A. judayi, A. calcarifera, Schroederia spiralis, S. indica.