• Title/Summary/Keyword: affinity model

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이성분 중금속계에서 Chlorella sp. HA-1을 이용한 생물학적 흡착 특성

  • Lee, Jae-Yeong;Baek, Gi-Tae;Gwon, Tae-Sun;Yang, Ji-Won
    • 한국생물공학회:학술대회논문집
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    • 2001.11a
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    • pp.497-500
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    • 2001
  • Adsorption characteristics on the biomass of Chlorella sp. HA -1 were investigated in binary system with $Pb^2$, $Cu^2$, $Cd^2$, and $Zn^2$ ions. For the adsorption tests of single metal, Langmuir model was showed good correlation for equilibrium data compared to Freundlich model. Maximum metal uptakes increased as follows: $Pb^2$>$Cd^2$>$Zn^2$>$Cu^2$, whereas the affinity showed different trends: $Cu^2$>>$Cd^2$>$Zn^2$>$Pb^2$. In binary metal system, $Cu^2$ ions inhibited sharply the adsorption of other metal ions except $Pb^2$ ions because of the high biosorption affinity of $Cu^2$ ions. In the case of $Cu^2$ and $Pb^2$ system, there was no significant inhibition on metal uptakes. The results of metal adsorption in the binary system could be explained well on the basis of Langmuir parameters evaluated.

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Enhancement of Saliency Map Using Motion and Affinity Model (운동 및 근접 모델을 이용하는 관심맵의 향상)

  • Gil, Jong In;Choi, Changyeol;Kim, Manbae
    • Journal of Broadcast Engineering
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    • v.20 no.4
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    • pp.557-567
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    • 2015
  • Over the past decades, a variety of spatial saliency methods have been introduced. Recently, motion saliency has gained much interests, where motion data estimated from an image sequence are utilized. In general, motion saliency requires reliable motion data as well as image segmentation for producing satisfactory saliency map which poses difficulty in most natural images. To overcome this, we propose a motion-based saliency generation that enhances the spatial saliency based on the combination of spatial and motion saliencies as well as motion complexity without the consideration of complex motion classification and image segmentation. Further, an affinity model is integrated for the purpose of connecting close-by pixels with different colors and obtaining a similar saliency. In experiment, we performed the proposed method on eleven test sets. From the objective performance evaluation, we validated that the proposed method produces better result than spatial saliency based on objective evaluation as well as ROC test.

The Search of Pig Pheromonal Odorants for Biostimulation Control System Technologies: Ⅱ. Holographic QSAR Model for Binding Affinities between Ligands of Volatile Odorants Molecules and Porcine Odorant Binding Protein (pOBP) (생물학적 자극 통제 수단으로 활용하기 위한 돼지 페로몬성 냄새 물질의 탐색: Ⅱ. 휘발성 냄새분자의 리간드와 Porcine Odorant Binding Protein (pOBP) 사이의 결합 친화력에 관한 홀로그래피적 QSAR 모델)

  • Sung N. D.;Park C. S.;Choi Y. S.;Myung P. K.
    • Reproductive and Developmental Biology
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    • v.29 no.1
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    • pp.43-48
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    • 2005
  • To search of a new porcine pheromonal odorants for biostimulation control system technologies to offer a potentially useful and practical way to improve reproductive efficiency in livestock species, the holographic quantitative structure activity relationship (HQSAR) model between odorants, 2-phenoxytetrahydrofurane (A), 2-cyclohexyl-oxytetrahydrofurane (B), derivatives and binding affinity constants (p[Od.]/sub 50/) for porcine odorant-binding protein (pOBP) as receptor of pig pheromones were derivated and disscused. The binding affinity constants of cyclohexyl substituents (A) for pOBP were higher (A>B) than that of phenyl substituents (B). It was revealed that the optimum HQSAR model XI using PLS analyses had a fragment length (5∼8) with chirality at 5 components and hologram length 97 bin, which had a cross-validated q²(predictablities) of 0.916, and a conventional correlation coefficient r² (fitness) of 0.988, respectively. From the atomic contribution, the C3 and C5 atom in 2-oxyfuryl group contributed to binding affinity constants, whereas the central carbon atom in tert-butyl group on the cyclohexyl ring and the C4 atom of furyl group parts showed no contribution.

PC User Segmentation based on user contextual inquiry interview analysis -Focusing on Soho, small and medium-sized businesses- (PC 사용자의 업무 행태분석을 통한 유형화 - 소호, 중소기업 사용자를 중심으로-)

  • Lee, Joung-Young;Moon, Hyun-Jung
    • 한국HCI학회:학술대회논문집
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    • 2008.02b
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    • pp.193-198
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    • 2008
  • Now days with the significant grows of internet and PC hardware/software, most of the business, include small size business and soho, is worked by PC/Network. However these critical changes, all the PC/Network system or service is identical and these make user a inconvenient experience and unpleasant aspect to PC/Network. This research is to segment the user bases on the user context of using PC and all this segmentation was done in contextual design process. From Contextual Interview, all data of user context of environment, use case, needs, voices, break downs were captured and these data were interpreted and filtered to affinity notes and user modeling. After the interpretation, the consolidation was being held by affinity diagram, which could make ready to segment the user. For the result, 3 segmentation was evaluated and which are the 'Holistic Networker', 'Unplugged Controller' and 'Passive Reactor'.

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Change in Cationic Amino Acid Transport System and Effect of Lysine Pretreatment on Inflammatory State in Amyotrophic Lateral Sclerosis Cell Model

  • Latif, Sana;Kang, Young-Sook
    • Biomolecules & Therapeutics
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    • v.29 no.5
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    • pp.498-505
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    • 2021
  • Amyotrophic lateral sclerosis (ALS) is a lethal neurological disorder characterized by the deterioration of motor neurons. The aim of this study was to investigate alteration of cationic amino acid transporter (CAT-1) activity in the transport of lysine and the pretreatment effect of lysine on pro-inflammatory states in an amyotrophic lateral sclerosis cell line. The mRNA expression of cationic amino acid transporter 1 was lower in NSC-34/hSOD1G93A (MT) than the control cell line (WT), lysine transport is mediated by CAT-1 in NSC-34 cell lines. The uptake of [3H]L-lysine was Na+-independent, voltage-sensitive, and strongly inhibited by inhibitors and substrates of cationic amino acid transporter 1 (system y+). The transport process involved two saturable processes in both cell lines. In the MT cell line, at a high-affinity site, the affinity was 9.4-fold higher and capacity 24-fold lower than that in the WT; at a low-affinity site, the capacity was 2.3-fold lower than that in the WT cell line. Donepezil and verapamil competitively inhibited [3H]L-lysine uptake in the NSC-34 cell lines. Pretreatment with pro-inflammatory cytokines decreased the uptake of [3H]L-lysine and mRNA expression levels in both cell lines; however, the addition of L-lysine restored the transport activity in the MT cell lines. L-Lysine exhibited neuroprotective effects against pro-inflammatory states in the ALS disease model cell lines. In conclusion, studying the alteration in the expression of transporters and characteristics of lysine transport in ALS can lead to the development of new therapies for neurodegenerative diseases.

VARIATIONS OF CONTAMINANT RETARDATION FACTOR IN THE PRESENCE OF TWO MOBILE COLLOIDS

  • Kim, Song-Bae;Kim, Dong-Ju
    • Proceedings of the Korean Society of Soil and Groundwater Environment Conference
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    • 2001.09a
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    • pp.115-119
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    • 2001
  • Contaminant retardation factor is derived from the colloidal and contaminant transport equations for a four-phase porous medium: an aqueous phase, two mobile colloidal phases, and a solid matrix. It is assumed that the contaminant sorption to solid matrix and colloidal particles and the colloidal deposition on solid matrix follow the linear isotherms. The behavior of the contaminant retardation factor in response to the change of model parameters is examined employing the experimental data of Magee et al. (1991) and Jenkins and Lion (1993). In the four-phase system, the contaminant retardation factor is determined by both the contaminant association with solid matrix and colloidal particles and the colloidal deposition on solid matrix. The contaminant mobility is enhanced when the affinity of contaminants to mobile colloids increases. In addition, as the affinity of colloids to solid matrix decreases, the contaminant mobility increases.

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Production of Anti-fetuin Immunoglobulin Y and its Isolation Using an Affinity Column (페튜인에 대한 면역글로부린 Y의 생성 및 친화성 컬럼에 의한 분리)

  • 정병욱;정영윤;김윤중;박지훈;구완모;김병수;김기돈;김하나;김하형
    • YAKHAK HOEJI
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    • v.47 no.6
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    • pp.438-443
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    • 2003
  • For the investigations of the usefulness of immunoglobulin Y (IgY), we attempted to produce and isolate IgY from egg yolk of white Leghorn hens immunized with fetuin as a model antigen. We used three methods to optimize the recovery of IgY: water dilution, polyethylene glycol, and carrageenan. The daily yield of anti-fetuin IgY from egg yolk was also examined, and it was isolated using a fetuin-affinity column at a yield of IgY of 2.7% from total IgY Furthermore, peroxidase-labeled antifetuin IgY was prepared, and was used to determine the minimum sensitivity against fetuin, which was found to occur to a fetuin concentration of 1 ng/$m\ell$.

Stability on Preventive Structures of Shore Erosion with Natural Affinity (자연 친화형 해안 침식방지 구조물의 안정성)

  • Lee, Jong-Seok;Han, Jae-Myung
    • The Journal of the Korea Contents Association
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    • v.7 no.9
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    • pp.212-219
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    • 2007
  • This study were developed with the preventive structures of shore erosion using the seawater circulation system in wave dissipation block of the natural affinity. The shore protection structures were established to excellent by the hydraulic model experiment on reflectivity and stability and wave overtopping in comparison with existing other structures. These structures, in order to analyzes also as the shore protection and the erosion preventive, were examined with the field applications of performance and the capacity of prevention, respectively, from field construction of the pending positions. As the result, the structures were ensured with the applications and the efficiency as the shore protection structure of erosion preventive by certifying accumulated sediment deposits in the field measurement and monitoring.

Sequence to Structure Approach of Estrogen Receptor Alpha and Ligand Interactions

  • Chamkasem, Aekkapot;Toniti, Waraphan
    • Asian Pacific Journal of Cancer Prevention
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    • v.16 no.6
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    • pp.2161-2166
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    • 2015
  • Estrogen receptors (ERs) are steroid receptors located in the cytoplasm and on the nuclear membrane. The sequence similarities of human $ER{\alpha}$, mouse $ER{\alpha}$, rat $ER{\alpha}$, dog $ER{\alpha}$, and cat $ER{\alpha}$ are above 90%, but structures of $ER{\alpha}$ may different among species. Estrogen can be agonist and antagonist depending on its target organs. This hormone play roles in several diseases including breast cancer. There are variety of the relative binding affinity (RBA) of ER and estrogen species in comparison to $17{\beta}-estradiol$ (E2), which is a natural ligand of both $ER{\alpha}$ and $ER{\beta}$. The RBA of the estrogen species are as following: diethyl stilbestrol (DES) > hexestrol > dienestrol > $17{\beta}-estradiol$ (E2) > 17- estradiol > moxestrol > estriol (E3) >4-OH estradiol > estrone-3-sulfate. Estrogen mimetic drugs, selective estrogen receptor modulators (SERMs), have been used as hormonal therapy for ER positive breast cancer and postmenopausal osteoporosis. In the postgenomic era, in silico models have become effective tools for modern drug discovery. These provide three dimensional structures of many transmembrane receptors and enzymes, which are important targets of de novo drug development. The estimated inhibition constants (Ki) from computational model have been used as a screening procedure before in vitro and in vivo studies.