• Title/Summary/Keyword: adjusted rand index

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A Variable Selection Procedure for K-Means Clustering

  • Kim, Sung-Soo
    • The Korean Journal of Applied Statistics
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    • v.25 no.3
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    • pp.471-483
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    • 2012
  • One of the most important problems in cluster analysis is the selection of variables that truly define cluster structure, while eliminating noisy variables that mask such structure. Brusco and Cradit (2001) present VS-KM(variable-selection heuristic for K-means clustering) procedure for selecting true variables for K-means clustering based on adjusted Rand index. This procedure starts with the fixed number of clusters in K-means and adds variables sequentially based on an adjusted Rand index. This paper presents an updated procedure combining the VS-KM with the automated K-means procedure provided by Kim (2009). This automated variable selection procedure for K-means clustering calculates the cluster number and initial cluster center whenever new variable is added and adds a variable based on adjusted Rand index. Simulation result indicates that the proposed procedure is very effective at selecting true variables and at eliminating noisy variables. Implemented program using R can be obtained on the website "http://faculty.knou.ac.kr/sskim/nvarkm.r and vnvarkm.r".

Comparison of the Cluster Validation Methods for High-dimensional (Gene Expression) Data (고차원 (유전자 발현) 자료에 대한 군집 타당성분석 기법의 성능 비교)

  • Jeong, Yun-Kyoung;Baek, Jang-Sun
    • The Korean Journal of Applied Statistics
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    • v.20 no.1
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    • pp.167-181
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    • 2007
  • Many clustering algorithms and cluster validation techniques for high-dimensional gene expression data have been suggested. The evaluations of these cluster validation techniques have, however, seldom been implemented. In this paper we compared various cluster validity indices for low-dimensional simulation data and real gene expression data, and found that Dunn's index is the most effective and robust, Silhouette index is next and Davies-Bouldin index is the bottom among the internal measures. Jaccard index is much more effective than Goodman-Kruskal index and adjusted Rand index among the external measures.

Multivariate Process Capability Indices for Skewed Populations with Weighted Standard Deviations (가중표준편차를 이용한 비대칭 모집단에 대한 다변량 공정능력지수)

  • Jang, Young Soon;Bai, Do Sun
    • Journal of Korean Institute of Industrial Engineers
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    • v.29 no.2
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    • pp.114-125
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    • 2003
  • This paper proposes multivariate process capability indices (PCIs) for skewed populations using $T^2$rand modified process region approaches. The proposed methods are based on the multivariate version of a weighted standard deviation method which adjusts the variance-covariance matrix of quality characteristics and approximates the probability density function using several multivariate Journal distributions with the adjusted variance-covariance matrix. Performance of the proposed PCIs is investigated using Monte Carlo simulation, and finite sample properties of the estimators are studied by means of relative bias and mean square error.

Variable Selection and Outlier Detection for Automated K-means Clustering

  • Kim, Sung-Soo
    • Communications for Statistical Applications and Methods
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    • v.22 no.1
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    • pp.55-67
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    • 2015
  • An important problem in cluster analysis is the selection of variables that define cluster structure that also eliminate noisy variables that mask cluster structure; in addition, outlier detection is a fundamental task for cluster analysis. Here we provide an automated K-means clustering process combined with variable selection and outlier identification. The Automated K-means clustering procedure consists of three processes: (i) automatically calculating the cluster number and initial cluster center whenever a new variable is added, (ii) identifying outliers for each cluster depending on used variables, (iii) selecting variables defining cluster structure in a forward manner. To select variables, we applied VS-KM (variable-selection heuristic for K-means clustering) procedure (Brusco and Cradit, 2001). To identify outliers, we used a hybrid approach combining a clustering based approach and distance based approach. Simulation results indicate that the proposed automated K-means clustering procedure is effective to select variables and identify outliers. The implemented R program can be obtained at http://www.knou.ac.kr/~sskim/SVOKmeans.r.

A Big Data Analysis by Between-Cluster Information using k-Modes Clustering Algorithm (k-Modes 분할 알고리즘에 의한 군집의 상관정보 기반 빅데이터 분석)

  • Park, In-Kyoo
    • Journal of Digital Convergence
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    • v.13 no.11
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    • pp.157-164
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    • 2015
  • This paper describes subspace clustering of categorical data for convergence and integration. Because categorical data are not designed for dealing only with numerical data, The conventional evaluation measures are more likely to have the limitations due to the absence of ordering and high dimensional data and scarcity of frequency. Hence, conditional entropy measure is proposed to evaluate close approximation of cohesion among attributes within each cluster. We propose a new objective function that is used to reflect the optimistic clustering so that the within-cluster dispersion is minimized and the between-cluster separation is enhanced. We performed experiments on five real-world datasets, comparing the performance of our algorithms with four algorithms, using three evaluation metrics: accuracy, f-measure and adjusted Rand index. According to the experiments, the proposed algorithm outperforms the algorithms that were considered int the evaluation, regarding the considered metrics.

Combining Distributed Word Representation and Document Distance for Short Text Document Clustering

  • Kongwudhikunakorn, Supavit;Waiyamai, Kitsana
    • Journal of Information Processing Systems
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    • v.16 no.2
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    • pp.277-300
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    • 2020
  • This paper presents a method for clustering short text documents, such as news headlines, social media statuses, or instant messages. Due to the characteristics of these documents, which are usually short and sparse, an appropriate technique is required to discover hidden knowledge. The objective of this paper is to identify the combination of document representation, document distance, and document clustering that yields the best clustering quality. Document representations are expanded by external knowledge sources represented by a Distributed Representation. To cluster documents, a K-means partitioning-based clustering technique is applied, where the similarities of documents are measured by word mover's distance. To validate the effectiveness of the proposed method, experiments were conducted to compare the clustering quality against several leading methods. The proposed method produced clusters of documents that resulted in higher precision, recall, F1-score, and adjusted Rand index for both real-world and standard data sets. Furthermore, manual inspection of the clustering results was conducted to observe the efficacy of the proposed method. The topics of each document cluster are undoubtedly reflected by members in the cluster.

Opera Clustering: K-means on librettos datasets

  • Jeong, Harim;Yoo, Joo Hun
    • Journal of Internet Computing and Services
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    • v.23 no.2
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    • pp.45-52
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    • 2022
  • With the development of artificial intelligence analysis methods, especially machine learning, various fields are widely expanding their application ranges. However, in the case of classical music, there still remain some difficulties in applying machine learning techniques. Genre classification or music recommendation systems generated by deep learning algorithms are actively used in general music, but not in classical music. In this paper, we attempted to classify opera among classical music. To this end, an experiment was conducted to determine which criteria are most suitable among, composer, period of composition, and emotional atmosphere, which are the basic features of music. To generate emotional labels, we adopted zero-shot classification with four basic emotions, 'happiness', 'sadness', 'anger', and 'fear.' After embedding the opera libretto with the doc2vec processing model, the optimal number of clusters is computed based on the result of the elbow method. Decided four centroids are then adopted in k-means clustering to classify unsupervised libretto datasets. We were able to get optimized clustering based on the result of adjusted rand index scores. With these results, we compared them with notated variables of music. As a result, it was confirmed that the four clusterings calculated by machine after training were most similar to the grouping result by period. Additionally, we were able to verify that the emotional similarity between composer and period did not appear significantly. At the end of the study, by knowing the period is the right criteria, we hope that it makes easier for music listeners to find music that suits their tastes.