• 제목/요약/키워드: Wild soybean

검색결과 134건 처리시간 0.025초

Development and Utilization of KASP Markers Targeting the Lipoxygenase Gene in Soybean

  • Seo-Young Shin;Se-Hee Kang;Byeong Hee Kang;Sreeparna Chowdhury;Won-Ho Lee;Jeong-Dong Lee;Sungwoo Lee;Yu-Mi Choi;Bo-Keun Ha
    • 한국작물학회지
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    • 제68권4호
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    • pp.294-303
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    • 2023
  • Lipoxygenase gives soybeans their grassy flavor, which can disrupt food processing efficiency. This study aimed to identify soybean genotypes with lipoxygenase deficiency among 1,001 soybean accessions and to develop kompetitive allele specific PCR (KASP) markers that can detect lipoxygenase mutations. Three lipoxygenase isozymes (Lox1, Lox2, and Lox3) were analyzed using a colorimetric assay based on a substrate-enzyme reaction. Among the 1,001 accessions examined, two (IT160160 and IT276392) exhibited a deficiency solely in Lox1, and one (IT269984) lacked both Lox1 and Lox2. IT160160 had a 74-bp deletion in exon 8 of Lox1 (Glyma13g347600), whereas IT276392 displayed a missense mutation involving the change of C to A at position 2,880 of Lox1. Moreover, we successfully developed four KASP markers that specifically target Lox1, Lox2, and Lox3 mutations. To validate the Lox1 KASP markers, we used two F2:3 populations generated through a cross between Daepung 2 (lipoxygenase wild type, maternal parent), IT160160, and IT276392 (null Lox1, paternal parent). The results revealed that the Daepung 2 × IT160160 group followed the expected 3:1 ratio according to Mendel's law, whereas the Daepung 2 × IT276392 group did not. Furthermore, a comparison between the colorimetric and KASP marker analyses results revealed a high agreement rate of 96%. KASP markers offer a distinct advantage by allowing the distinction of heterozygous types independent of other variables. As a result, we present an opportunity to expedite the lipoxygenase-deficient cultivar development.

Lipase gene의 도입에 의한 유류분해세균 Klebsiella sp. KCL-1의 표면활성과 유화력 향상 (The Improvement of surface activity and Emulsification Activity by Transformation of Lipase Gene in Klebsiella sp. KCL-1, Oil-Degrading Bacterium.)

  • 정수열
    • 생명과학회지
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    • 제14권5호
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    • pp.834-839
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    • 2004
  • 원유 분해능이 강력한 해양균주 Klebsiella sp. KCL-1의 표면활성 능력과 유화활성의 향상을 위하여 An et. al.이 보고한 Pseudomouas sp. SW-3균주로부터 cloning된 pET-Lip을 KCL-1에 도입하였다. KCL-1/pET-Lip은 2% glucose, 4% soybean oil, 4% kerosene 각각의 탄소원에 대하여 야생형균주 KCL-1과 비교하여 우수한 표면장력 저하 능력을 가지게 된 것을 알 수 있다. KCL-1/pET-Lip은 4% soybean oil를 유일한 탄소원으로 배지에 첨가한 경우 표면장력이 55 dyne/cm에서 32 dyne/cm로 줄어들었다. 세포의 성장은 2% glucose가 탄소원으로 사용된 경우 성장이 최대로 확인되었다. 0.2% glucose와 2% soybean oil을 복합적으로 첨가한 경우 2% glucose를 탄소원으로 사용한 경우에 비해 균의 생육도는 별 차이를 보이지 않으나 표면 장력에는 뚜렷한 차이를 보였다. 4% soybean oil을 사용한 경우와 비교할 경우 균의 생육도는 월등히 높으며, 표면장력의 저하능은 96시간째에 차이가 2 dyne/cm로 비슷해진다. 따라서 탄소원으로서 glucose는 세포의 성장과 관련이 있고, soybean oil 경우는 표면 장력 저하와 관계가 있는 것으로 예상된다. 또한 유화활성의 경우 사용된 모든 기질에 대하여 유화활성이 증가하는 것을 확인하였다. 특히 대두유를 기질로 사웅한 경우 유화활성이 가장 높았다 대두유를 탄소원으로 사용하여 KCL-1/pET-Lip 을 48, 72, 96시간 배양한 세포 추출물에서 42 kDa의 lipase로 추정되는 단백질이 발현됨을 확인하였다. 결과적으로 lipase를 도입한 KCL-1/pET-Lip의 표면활성 변화 능력이 월등히 향상된 것으로 추정된다.

Identification of Quantitative Trait Loci Associated with Isoflavone Contents in Soybean Seed

  • Kim Myung Sik;Park Min Jung;Hwang Jung Gyu;Jo Soo Ho;Ko Mi Suk;Chung Ill Min;Chung Jong Il
    • 한국작물학회지
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    • 제49권5호
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    • pp.423-428
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    • 2004
  • Soybean seeds contain high amounts of isoflavones that display biological effects and isoflavone content of soybean seed can vary by year, environment, and genotype. Objective of this study was to identify quantitative trait loci that underlie isoflavone content in soybean seeds. The study involved 85 $F_2$ populations derived from Korean soybean cultivar 'Kwangkyo' and wild type soybean 'IT182305' for QTL analysis associated with isoflavone content. Isoflavone content of seeds was determined by HPLC. The genetic map of 33 linkage groups with 207 markers was constructed. The linkage map spanned 2,607.5 cM across all 33 linkage groups. The average linkage distance between pair of markers among all linkage groups was 12.6 cM in Kosambi map units. Isoflavone content in $F_2$ generations varied in a fashion that suggested a continuous, polygenic inheritance. Eleven markers (4 RAPD, 3 SSR, 4 AFLP) were significantly associated with isoflavone content. Only two markers, Satt419 and CTCGAG3 had F-tests that were significant at P<0.01 in $F_2$ generation for isoflavone content. Interval mapping using the $F_2$ data revealed only two putative QTLs for isoflavone content. The peak QTL region on linkage group 3, which was near OPAG03c, explained $14\%$ variation for isoflavone content. The peak QTL region on linkage group 5, which was located near OPN14 accounted for $35.3\%$ variation for isoflavone content. Using both Map-Maker-QTL $(LOD{\geq}2.0)$ and single-factor analysis $(P{\leq}0.05)$, one marker, CTCGAG3 in linkage group 3 was associated with QTLs for isoflavone content. This information would then be used in identification of QTLs for isoflavone content with precision

Genetic Diversity and Relationship in Soybean MDP (Mutant Diversity Pool) Revealed by TRAP and TE-TRAP Markers

  • Kim, Dong-Gun;Bae, Chang-Hyu;Kwon, Soon-Jae
    • 한국자원식물학회:학술대회논문집
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    • 한국자원식물학회 2019년도 춘계학술대회
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    • pp.32-32
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    • 2019
  • Mutation breeding is the useful tool to improve agronomic traits in various crop species. Soybean is most important crop and is rich in protein and oil contents. Despite of the importance as economic value and various genetic resource of soybean, there have been limited studies of genetic relationship among mutant resources through radiation breeding. In this study, the agronomical phenotype for selecting various genetic resources was evaluated in 528 soybean mutant lines. As a result, 210 soybean mutants with their original cultivars were selected with various traits. We named 210 selected lines as Mutant Diversity Pool (MDP). The genetic diversity and the relationship of the MDP were investigated using TRAP and TE-TRAP markers. In TRAP analysis, sixteen primer combination (PC)s were used and a total of 551 fragments were amplified. The highest (84.00%) and the lowest (32.35%) polymorphism levels were showed in PC MIR157B+Ga5 and B14G14B+Ga3, respectively. The mean of PIC values was 0.15 ranging from 0.07 in B14G14B+Sa12 to 0.23 in MIR157B+Sa4. Phylogenetic and population structure analysis indicated that the 210 MDP lines dispersed to four groups among the wild types and their mutants. The highest genetic diversity among populations was observed between lines Paldal and 523-7 (Fst=0.409), whereas the lowest genetic diversity was between population KAS360-22 and 94seori (Fst=0.065). AMOVA showed 11.583 (21.0%) and 43.532 (79.0%) variations in inter and intra mutant population, respectively. Overall, the genetic similarity of each intra mutant populations was closer than that of inter mutant population. A total of 408 fragments were amplified in the 210 MDP using twelve PCs of TE-TRAP markers that were obtained from a combination of three TIR sequence of transposable elements (MITE-stowaway; M-s, MITE-tourist; M-t, PONG). The highest (77.42%) and the lowest (56.00%) polymorphism levels were showed in PONG+Sa4 and PONG+Sa12, respectively. The mean of PIC values was 0.15 ranging from 0.09 in M-s+Sa4 and M-s+Ga5 to 0.21 in M-t+Ga5. AMOVA of M-s showed 2.209 (20%) and 8.957 (80%) variations in inter and intra mutant population, respectively. AMOVA of M-t showed 2.766 (18%) and 12.385 (82%) variations in inter and intra mutant population, respectively. AMOVA of PONG showed 3.151 (29%) and 7.646 (71%) variations in inter and intra mutant population, respectively. According to our study, the PONG had higher inter mutant population and lower intra mutant population. This mean was that for aspect of radiation sensitivity, M-s and M-t showed higher mobility than that of PONG. Our results suggest that the TRAP and the TE-TRAP markers may be useful for assessing the genetic diversity and relationship among soybean MDP and help to improve our knowledge of soybean mutation/radiation breeding.

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다량 뿌리혹 형성 콩 계통의 도입 개발 및 생육특성구명 1. 돌연변이유기에 의한 콩 초다뿌리혹형성 계통선발 (Introduction, Development, and Characterization of Supernodulating Soybean Mutant. 1. Mutagenesis of Soybean and Selection of Supernodulating Soybean Mutant)

  • 이홍석;채영암;박의호;김용욱;윤광일;이석하
    • 한국작물학회지
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    • 제42권2호
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    • pp.247-253
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    • 1997
  • 콩에서 돌연변이를 효율적으로 유기시킬 수 있는 적정 EMS농도를 결정하기 위하여, 황금콩, 장엽콩, 검정콩 001에 30, 50, 70mM EMS세 수준으로 처리 한 다음 M$_1$종자의 포장발아율과 M$_2$ 세대의 돌연변이체 출현빈도율을 조사하였으며 다량 뿌리혹형성 변이체 선발을 위하여 신팔달콩002 종자 약 18,000립에 30mM EMS를 처리하여 M$_2$세대에서 선발하고, 선발된 변이체의 뿌리혹 형성능력을 미국 초다뿌리혹형성 nts계통과 비교한 결과는 다음과 같다. 1. M$_1$종자의 포장출현율은 검정콩 001가 황금콩과 장엽콩보다 높은 경향이었으며, 세 품종 모두 EMS처리 농도가 증가함에 따라 포장출현율이 낮았다. 2. M$_2$세대에서 돌연변이개체는 엽록소 결핍개체가 가장 많이 출현하였는데, 그외에도 생장점괴사, 엽이상, 엽수변이체, 단경 등 다양한 변이양상을 보였다. 3. 30mM EMS처리가 포장발아율도 높고, 돌연변이개체 출현율도 50, 70mM에 비하여 양호한 편으로 판단되었다. 4. 신팔달콩 002로부터 30mM EMS처리에 의하여 M$_2$세대에서 뿌리혹 형성 nts계통보다도 많은 뿌리혹이 형성되었으며, 뿌리혹형성도 일찍 시작되었다.

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Relationship between Nodulating Characters and Yield Components in Supernodulating Soybean Mutants

  • Park Sei Joon;Youn Jong Tag;Kim Wook Han;Lee Jae Eun;Kwon Young Up;Shin Jin Chul;Seong Rak Chun
    • 한국작물학회지
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    • 제50권1호
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    • pp.5-10
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    • 2005
  • This experiment was conducted to clarify the functions of supernodulating characters on seed yield determination through the comparison of agricultural traits of supernodulating soybean mutants, Sakukei4, SS2-2, and their parent cultivars, Enrei and Shinpaldalkong2. The plant dry weights of supernodulating mutants, Sakukei4 and SS2-2, were $52\%$ and $61\%$ of their wild type parents at full seed stage (R6). However, the relative growth rate (RGR) from the pod set stage (R3) to R6 of Sakukei4 was 0.022 g/g/day and that of SS2-2 was 0.016 g/g/day, which were higher than those of their parents. Nodule number and dry weight were increased in two supernodulating mutants by the R6 stage. The nitrogen concentrations of leaf, petiole and stem of Sakukei4 were higher than those of Enrei. SS2-2 showed higher nitrogen concentration in petiole than Shinpaldalkong2 had. The positive correlations were appeared between nodule dry weight, plant dry weight and pod number, in two supernodulating mutants during the period from R3 to R6 stage. Although all of the yield components and seed yield were lower in two supernodulating mutants than their parents at the stage of full maturity (R8), the harvest index was higher in supernodulating mutants. The increasing rates of pod number to stem dry weight in two supernodulating mutants showed the higher than those of two their parents at R8 stage. In conclusion, the relative growth rates during the early to the middle reproductive growth period were higher in supernodulating mutants than the wild types. This could be resulted in an increase in pod number. The increase of relative growth rate was the result of the successive supplement of nitrogen source from biological nitrogen fixation (BNF) of nodules during the middle reproductive growth period in supernodulating mutants.

Growth and Maturity in Response to Planting Times in Supernodulating Soybean Mutants

  • Park Sei Joon;Youn Jong Tag;Lee Jae Eun;Kim Wook Han;Kwon Young Up;Shin Jin Chul;Seong Rak Chun
    • 한국작물학회지
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    • 제50권1호
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    • pp.11-15
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    • 2005
  • This experiment was conducted to investigate the changes of growth and maturity and to clarify the function of supernodulating characters, excessive nodules and high biological nitrogen fixation rate (BNF), on maturity in response to different planting time in supernodulating soybean mutants. Two supernodulating soybean mutants, Sakukei4 and SS2-2, and their parent cultivars, Enrei and Shinpaldalkong2, were planted on May 24 and June 15, 2004. The degrees of the shortening of growth days by the planting time delay were 18 to 22 days in four cultivar, and there were no significant differences among the cultivars. However, four cultivars showed the different maturity properties. Sakukei4, mutated from Enrei, showed later maturity than that of Enrei, and 882-2, mutated from Shinpaldalkong2, showed earlier maturity than that of Shinpaldalkong2. The plant and nodule dry weights at R6 stage of Sakukei4 showed the smallest decrement and those of SS2-2 was showed the largest decrement by the delay of planting time. The photosynthetic rates of Sakukei4 during the late reproductive growth period were slowly decreased, however those of SS2-2 were steeply decreased in two planting time treatments. Overall, the growth of Sakukei4 was decreased slowly, however the growth of SS2-2 was decreased sharply according to the delay of planting time. The percentage of seed yield of Sakukei4 in June planting plot compared with May planting plot at R8 stage was $92\%$, which was the lowest decreasing rate of yield among the cultivars, and in the case of SS2-2, it was in $76\%$, the highest one. These results indicated that the responses of supernodulating mutants by the delay of planting time were very similar to the wild types. This means supernodulating characters in supernodulating soybean mutants might not affect to the maturity property. Additionally, the maturity property could be considered as an important characteristics to decide or to select on the developments of supernodulating soybean mutants, which have a low productivity by an excessive nodules, especially.

한국 재래종 콩집단에서 비린내 없는 콩품종 육성을 위한 Lipoxygenase 결실인자 변이 연구 (Screening for Genotypes Lacking Lipoxygenase from Germplasm Collection of Korean Soybean Land Races)

  • 권신한;박경숙;김미영;김봉용;송희섭
    • 한국작물학회지
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    • 제37권6호
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    • pp.528-533
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    • 1992
  • Lipoxygenase는 대두종실에 많이 포함되어 있어 대두의 불포화지방질을 산화시켜 대두 특유의 불쾌한 콩비린내를 나게 함으로서 콩나물을 위시한 많은 대두식품제조공정에서 어려움을 주고 있다. Lipoxygenase에는 L$\times$1, L$\times$2, L$\times$3의 3가지 isozyme가 있는데 그동안 미국과 일본의 학자들에 의해 lipoxygenase 결핍(1$\times$1, 1$\times$2, 1$\times$3)돌연변이 계통이 발견되었고 또 단순 열성 유전 양식임이 밝혀짐으로서 lipoxygenase 문제가 육종차원에서 해결될 수 있는 전망이 보인다. 본 연구는 우리나라 재래종 집단에서 lipoxygenase isozyme 소재를 제공하려는데 그 목적이 있다. 본 실험에서 L$\times$1 결핍계통 KAS 610-3, KAS 621-8이 선발되었으며 lipoxygenase 결핍계통은 일반적으로 소립이고, 지방합량은 낮았으며, 또 본 실험에서 선발된 L$\times$1 결핍 2계통은 특징적으로 콩나방 피해가 컸다. 공시계통수는 적었지만 야생종 대두에서는 lipoxygenase 결핍유전자형이 발견되지 않았다. 우리나라에서 발견된 L$\times$1 및 L$\times$3가 결핍된 4계통이 모두 경남지역의 재래종에 한정된 것으로 미루어 변이투기 역사는 짧을 것으로 추정된다.

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당뇨조절식의 조리법과 혈당반응효과 (Recipes for dishes controlling diabetes and its blood glucose response effect)

  • 김명애;김연선;윤석권
    • 한국식품조리과학회지
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    • 제15권4호
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    • pp.401-409
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    • 1999
  • 본 연구는 혈당반응이 낮은 식품인 미역, 시금치, 돌미나리, 산마, 토마토를 활용하여 37종의 부식에 대한 조리법을 개발하고, 일반식과 저GI식단을 정상인을 대상으로 혈당반응을 비교 분석함으로써, 혈당조절효과가 있고 기호성이 있는 당뇨조절식단을 개발하는데 도움이 되고자 한다. 조리법은 전통식 조리형태에 가까울수록 높은 평가를 받았다. 기호성이 높은 조리법으로는 미역쇠고기국, 미역된장국, 미역건새우죽, 미역수제비, 미역줄기볶음, 미역버섯회, 미역고추장무침, 시금치당근즙, 시금치된장국, 시금치전, 시금치두부무침 , 돌미나리굴생채, 돌미나리쇠고기무침, 돌미나리즙, 돌미나리초대, 마조림 , 마전등으로 6.8-8.2점의 평가를 받았다. 정상인에 대하여 일반식과 당뇨조절식의 혈당반응을 조사한 결과, 일반식 GI 100에 대하여 당뇨조절식은 GI 91.3-GI 57.9로서 혈당강하효과가 있었다. 특히, GI 57.9로서 가장 효과가 컸던 식단은 30% 검정콩 혼식에 당뇨식 반찬이었다.

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SSR 마커에 의한 한국 원산 Soja 아속의 다양성과 지리적 유연관계 (Diversity and Geographical Relationships by SSR Marker in Subgenus Soja Originated from Korea)

  • 조양희;윤문섭;이정란;백형진;김창영;김태산;조은기;이희봉
    • 한국작물학회지
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    • 제51권3호
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    • pp.239-247
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    • 2006
  • 우리나라에서 자생하는 야생콩(Glycine soja) 81점과 재래종 콩(G. max) 130점에 대해 7개의 SSR 마커의 다형성을 통해 두 종간의 변이를 조사하고 지리적 유연관계를 분석한 결과를 요약하면 다음과 같다. 1. 전체 두종에서 총 144 개의 대립인자(평균 20.6개)를 확인하였고, 각 유전자좌별 복수 대립인자수는 $13{\sim}41$개로 나타났다. 각 종별 대립인자수로 야생콩은 총 117개의 대립인자수(평균 16.7개)를 나타냈으며 재래종 콩은 총 69개의 대립인자(평균 9.9개)를 나타냈고, 두종간에 서로 공유된 대립인자수는 총 42개였다. 2. 전체 두종에 대한 유전자좌별 유전자 다양성 값 범위는 0.69(Satt141)${\sim}0.96$(Sat_074)이었다. 또한 전체 다양성 값은 0.81을 나타냈고 야생콩은 0.88, 재래종 콩은 0.69였다. 3. 야생콩과 재래종 콩의 유전적 변이에서 SSR 분석에 의한 정준판별분석 결과, Canl(84.2%)에 의해 좌측은 G. soja(I군), 우측은 G. max(II군) 그리고 두 종이 서로 중복되는 군(III군)으로 구분되었으며, 유전적 기저가 넓은 야생콩이 재래종에 비해 변이가 크게 나타났다. 4. 야생콩의 지리적 유연관계는 2개의 군으로 구분되었는데 I군은 강원, 경상, 전라, 충청도 지역이, II군에는 경기도 지역이 독립된 군을 형성하였으며, I군내에서는 강원도와 경상도 지역이, 그리고 전라도와 충청도 지역이 각각 같은 군을 형성하였다. 재래종 콩도 2개의 군으로 구분되었는데 I군에는 강원도, 경기도, 경상도 지역이, II군에는 전라도, 충청도 지역이 포함되었다. 또한, I군내에서는 경상도 지역이 독립된 군을 형성하였으며, 강원도와 경기도 지역이 강한 유연관계를 나타냈다.