• Title/Summary/Keyword: Web Based Visualization

Search Result 244, Processing Time 0.032 seconds

SOP (Search of Omics Pathway): A Web-based Tool for Visualization of KEGG Pathway Diagrams of Omics Data

  • Kim, Jun-Sub;Yeom, Hye-Jung;Kim, Seung-Jun;Kim, Ji-Hoon;Park, Hye-Won;Oh, Moon-Ju;Hwang, Seung-Yong
    • Molecular & Cellular Toxicology
    • /
    • v.3 no.3
    • /
    • pp.208-213
    • /
    • 2007
  • With the help of a development and popularization of microarray technology that enable to us to simultaneously investigate the expression pattern of thousands of genes, the toxicogenomics experimenters can interpret the genome-scale interaction between genes exposed in toxicant or toxicant-related environment. The ultimate and primary goal of toxicogenomics identifies functional context among the group of genes that are differentially or similarly coexpressed under the specific toxic substance. On the other side, public reference databases with transcriptom, proteom, and biological pathway information are needed for the analysis of these complex omics data. However, due to the heterogeneous and independent nature of these databases, it is hard to individually analyze a large omics annotations and their pathway information. Fortunately, several web sites of the public database provide information linked to other. Nevertheless it involves not only approriate information but also unnecessary information to users. Therefore, the systematically integrated database that is suitable to a demand of experimenters is needed. For these reasons, we propose SOP (Search of Omics Pathway) database system which is constructed as the integrated biological database converting heterogeneous feature of public databases into combined feature. In addition, SOP offers user-friendly web interfaces which enable users to submit gene queries for biological interpretation of gene lists derived from omics experiments. Outputs of SOP web interface are supported as the omics annotation table and the visualized pathway maps of KEGG PATHWAY database. We believe that SOP will appear as a helpful tool to perform biological interpretation of genes or proteins traced to omics experiments, lead to new discoveries from their pathway analysis, and design new hypothesis for a next toxicogenomics experiments.

Web-based 3D Object Retrieval from User-drawn Sketch Query (스케치를 이용한 웹 환경에서의 3차원 모델 검색)

  • Song, Jonghun;Ju, Jae Ho;Yoon, Sang Min
    • Journal of KIISE
    • /
    • v.41 no.10
    • /
    • pp.838-846
    • /
    • 2014
  • Three-dimensional (3D) object retrieval from user-drawn sketch queries is one of the important research issues in the areas of pattern recognition and computer graphics for simulation, visualization, and Computer Aided Design. The performance of content-based 3D object retrieval system depends on the availability of effective descriptors and similarity measures for this kind of data. In this paper, we present a sketch-based 3D object retrieval system by extracting a hybrid edge descriptor which is robust against rotation and translation. The experimental results which are based on HTML5 and WebGL show that proposed sketch-based 3D object retrieval method is very efficient to search and order the 3D objects according to user's intention.

Case Study of UML(Unified Modeling Language) Design for Web-based Forest Fire Hazard Index Presentation System (웹 기반 산불위험지수 표출시스템에서의 UML(Unified Modeling Language) 설계 사례)

  • Jo, Myung-Hee;Jo, Yun-Won;Ahn, Seung-Seup
    • Journal of the Korean Association of Geographic Information Studies
    • /
    • v.5 no.1
    • /
    • pp.58-68
    • /
    • 2002
  • Recently as recognition to prevent nature disasters is reaching the climax, the most important job of government official is to provide information related to the prevention of nature disasters through the Web and to bring notice to prevent disaster under people. Especially, if the case of daily forest fire hazard index is provided within visualization on Web, people may have more chances to understand about forest fire and less damages by large scale of forest fire. Forest fire hazard index presentation system developed in this paper presents daily forest fire hazard index on map visually also provides the information related to it in text format. In order to develop this system, CBDP(Component Based Development Process) is proposed in this paper. This development process tries to emphasize the view of reusability so that it has lifecycle which starts from requirement and domain analysis and finishes to component generation. Moreover, The concept of this development process tries to reflect component based method, which becomes hot issue in software field nowadays. In the future, the component developed in this paper may be possibly reused in other Web GIS application, which has similar function to it so that it may take less cost and time to develop other similar system.

  • PDF

A Novel Web-based Management of Networked Display for Advanced Collaboration Environment

  • Ramachandra, Vinay;Han, Sang-Woo;Bae, Chang-Hyeok;Kim, Jong-Won
    • 한국HCI학회:학술대회논문집
    • /
    • 2009.02a
    • /
    • pp.221-226
    • /
    • 2009
  • Not many years ago, people found the contemporary technology expensive and difficult to use in collaborative type of meetings. Today, with the technology advanced to high standards and accessible at cheaper price, its adaption is becoming more and more ubiquitous with wide range of applications. Today's meeting rooms are not just plain old telephone systems with microphones and speakers. Today's meeting rooms are smart and intelligent. They can identify the participants; they can provide natural view of remote participants; they can proactively manage resources for collaboration and so on. More effective collaboration is possible with deployment of devices like high-definition cameras, advanced displays, sensors, gigabit networks, trackers, pointers, and high-end audio devices. Devices alone are not enough in the meeting rooms. We need software infrastructure to manage the devices and meeting contexts. One such software infrastructure is SMeet, a Smart Meeting space, which we have developed to provide an effective multi-party remote collaboration environment. Networked display systems are used in such advanced collaboration environment for better visualization. In this paper we discuss a novel approach to control and manage networked display systems in SMeet environment.

  • PDF

Semantic Service Composition Based on Semantic Broker (시맨틱 브로커 기반 시맨틱 서비스 조합)

  • Jung, Hanmin;Lee, Mi-Kyoung;You, Beom-Jong
    • Proceedings of the Korea Contents Association Conference
    • /
    • 2009.05a
    • /
    • pp.283-288
    • /
    • 2009
  • Semantic service can be defined as the service providing search API or reasoning API based on ontology and Web Services. It performs a pre-defined task by exploiting URI, classes, and properties. This study introduces a semantic service composition method based on a semantic broker referring ontology and management information of semantic services stored in a semantic service manager with requirements of the user. The requirements consist of input instances, an output class, a visualization type, semantic service names, and property names. This composition method provides dynamically generated semantic service pipelines including composit semantic services. The user can execute the pipelines provided by the semantic broker to find a meaningful semantic pipeline. After all, this study contributes to develop a system supporting human service planners who want to find composit semantic services among distributed semantic services.

  • PDF

Design and Implementation of an Information Visualization System based on Structured Classification Technique (구조적 분류 기법을 기반으로 한 정보 시각화 시스템 설계 및 구현)

  • Kim, Young-Ran;Koo, Yeon-Seol
    • The Transactions of the Korea Information Processing Society
    • /
    • v.6 no.12
    • /
    • pp.3514-3522
    • /
    • 1999
  • While the method of information collection and visual interface technique have been researched actively on web information retrieval, a study on structured modeling for effective classification of a wide collective information leaves to be desired. In this paper, we represent information feature based on structured information model. It aims at carrying out effectively the user's retrieval environment through visualization technique with analyzing the information feature. We propose a information classification method using Facet units and we construct the object model, table model, SQL code to define the relation of the information, and represent the information feature based on a wide range of views. After users gain a better global understanding of the information feature, retrieve more easily through their information. Conventional information retrieval is user-oriented to be what user want, but proposed technique it data-oriented which helps users to understand what exist in database by showing information feature.

  • PDF

Development of a Method for Analyzing and Visualizing Concept Hierarchies based on Relational Attributes and its Application on Public Open Datasets

  • Hwang, Suk-Hyung
    • Journal of the Korea Society of Computer and Information
    • /
    • v.26 no.9
    • /
    • pp.13-25
    • /
    • 2021
  • In the age of digital innovation based on the Internet, Information and Communication and Artificial Intelligence technologies, huge amounts of datasets are being generated, collected, accumulated, and opened on the web by various public institutions providing useful and public information. In order to analyse, gain useful insights and information from data, Formal Concept Analysis(FCA) has been successfully used for analyzing, classifying, clustering and visualizing data based on the binary relation between objects and attributes in the dataset. In this paper, we present an approach for enhancing the analysis of relational attributes of data within the extended framework of FCA, which is designed to classify, conceptualize and visualize sets of objects described not only by attributes but also by relations between these objects. By using the proposed tool, RCA wizard, several experiments carried out on some public open datasets demonstrate the validity and usability of our approach on generating and visualizing conceptual hierarchies for extracting more useful knowledge from datasets. The proposed approach can be used as an useful tool for effective data analysis, classifying, clustering, visualization and exploration.

A Study on the Visualization and Utilization of Mapbox Online Map based on Citizen Science Using Park Tree Database - Focused on Data by Tree species in Seoul Forest Park - (공원 수목 데이터베이스를 활용한 시민 과학 기반 Mapbox 온라인 지도 시각화 및 활용 연구 - 서울숲 공원의 수종별 수목 데이터를 활용하여 -)

  • Kim, Do-Eun;Kim, Sung-hwan;Choi, Seong-woo;Son, Yong-Hoon;Zoh, Kyung-jin
    • Journal of the Korean Society of Environmental Restoration Technology
    • /
    • v.25 no.4
    • /
    • pp.49-65
    • /
    • 2022
  • Since trees in the city are green assets that create a healthy environment for the city, systematic management of trees improves urban ecosystem services. The sporadic urban tree information centered on the site is vast, and it is difficult to manage the data, so efforts to increase efficiency are needed. This paper summarizes tree data inventory based on data constructed by Seoul Green Trust activists and constructs and discloses online database maps using Tableau Software. In order to verify the utilization of the map, we divided into consumer and supplier aspects to collect various opinions and reflect feedback to implement tree database maps for each area and species of Seoul Forest. As a result, the utilization value of tree database in urban parks was presented. The technical significance of this study is to systematically record the process of constructing and implementing a dashboard directly using the Mapbox platform and Tableau Software in the field of landscaping for the first time in Korea. In addition, the implications and supplements of landscape information were derived by collecting user opinions on the results. This can be used as an exploratory basis in the process of developing online-based services such as web and apps by utilizing landscaping tree information in the future. Although the visualization database currently constructed has limitations that ordinary users cannot interact in both directions because it utilizes business intelligence tools in terms of service provision it has affirmed both the database construction and its usability in web public format. In the future it is essential to investigate the assets of the trees in the city park and to build a database as a public asset of the city. The survey participants positively recognized that information is intuitively presented based on the map and responded that it is necessary to provide information on the overall urban assets such as small parks and roadside trees by using open source maps in the future.

A Study on the Pattern Analysis Method using the User Log on the CMS (CMS의 사용자 로그를 이용한 패턴 분석 방법 연구)

  • Moon, Dong-Yeol;Park, Koo-Rack;Kim, Dong-Hyun;Jung, Jin-Young
    • Journal of Digital Convergence
    • /
    • v.14 no.11
    • /
    • pp.275-281
    • /
    • 2016
  • In modern society, which boomed it became easier to obtain the necessary information to the emergence of a variety of smart devices. Due to this, the frequency of using the content based on the Web is growing rapidly. In addition, companies are turning into a production and modify the content using the CMS under the web-based. It can be a very important part to provide users with the content. Currently web services are designing a UI to the device and provided. To improve the ease of use, they are enhancing services only by survey and analysis of the patterns of all users. Most are designed without considering the UX only in the technical aspects. In this paper, to break the limits that apply to all users of the Web service pattern analysis, we propose a visualization system via the animation based on the individual user's movement patterns and usage patterns. Through this convergence is expected to be able to transform the web from the central manager to the user UX and the planning aspects researchers.

Establishment of the Luminaire DB on Internet Web-based Visualization System Using RADIANCE Program (RADIANCE 프로그램을 이용한 인터넷 웹기반 가시화 시스템에서의 조명기구 DB구축)

  • 오은숙;이준형;최안섭;송규동
    • Proceedings of the Korean Institute of IIIuminating and Electrical Installation Engineers Conference
    • /
    • 2002.11a
    • /
    • pp.239-242
    • /
    • 2002
  • With existing illumination rendering system being used in domestic, internationally developed common programs are taking over the market more than 90%. However, since the programs are established with DB designed to be most suitable for their own products, accuracy in analysis and visualized image are hardly reliable. This raises the necessities of establishing DB for domestic developed products. A method of establishing artificial luminair DB, which was studied on DB establishment in consideration of optical characteristics of domestic products with using RADIANCE program was presented in this study, and it is considered as the program of simulating light movement most accurately among all rendering programs developed so far.

  • PDF