• Title/Summary/Keyword: WILD PLANT AND ANIMAL

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Histological observations on skin papilloma in wild red halibut (Hippogossoides dubius) (자연산 홍가자미 (Hippogossoides dubius) 의 피부 종양의 조직학적 관찰)

  • Park, Sung-Woo;Yu, Jin-Ha;Jung, Eun-Bin;Song, Jae-Hee
    • Journal of fish pathology
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    • v.25 no.3
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    • pp.243-247
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    • 2012
  • Histopathological observations on a epidermal papilloma of wild red halibut (Hippogossoides dubius) caught at the area around Echung Island and Gogunsan Islands were done. The papilloma formed on the dorsal fin was the same color with the body on the ocular side but black on the non-ocular side. Under light microscopy, the tumor on the skin was very similar to epithelial papilloma supported by connective tissue. X-cell-like cells in the tumors were large and eosinophilic with a centrally-located, large nucleus. But the characteristic large nucleolus in the nucleus of the x-like cells was indistinct clear in this specimen because about 6-9 hours have passed after catching the fish and autolysis have occurred.

Investigating the Metabolism of Clubroot-Infected Plants by Integrating Metabolomic and Transcriptomic Approaches

  • Yahaya, Nazariyah;Malinowski, Robert;Burrell, Mike;Walker, Heather;Petriacq, Pierre;Rolfe, Stephen
    • 한국균학회소식:학술대회논문집
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    • 2015.05a
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    • pp.27-27
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    • 2015
  • Clubroot (Plasmodiophora brassicae) is a serious agricultural problem affecting Brassica crop production worldwide. It also infects the model plant Arabidopsis thaliana. During infection, this biotrophic pathogen manipulates the development and metabolism of its host leading to the development of galls in the root and hypocotyl. In turn, its own development is strongly influenced by the host. The aim of this study is to investigate the metabolism of clubroot-infected plants using a combination of transcriptomic and metabolomic approaches. We have used direct injection mass spectrometry to obtain a metabolic fingerprint of when changes in the metabolome occur and linked this with changes in host and pathogen gene expression. We have identified alterations in carbohydrate metabolism that occur during P. brassicae infection of A. thaliana plants. Transcriptomic analysis showed that host genes associated with sugar transport and metabolism were induced during gall formation and that the pathogen also expresses genes associated with these processes. We have examined the impact of inactivating host sucrose synthase, cytosolic invertase and sugar permeases on gall formation, identifying host genes that are required for gall formation. We have also explored how sugar status is changed in root tissue, developing and mature leaf during infection of wild type and mutant plants.

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AFLP analysis to assess genomic stability in Solanum regenerants derived from wild and cultivated species

  • Aversano, Riccardo;Di Dato, Francesco;Di Matteo, Antonio;Frusciante, Luigi;Carputo, Domenico
    • Plant Biotechnology Reports
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    • v.5 no.3
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    • pp.265-271
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    • 2011
  • The cultivated potato as well as its tuber-bearing relatives are considered model plants for cell and tissue culture, and therefore for exploiting the genetic variation induced by in vitro culture. The association between molecular stability and tissue culture in different genetic backgrounds and ploidy levels has already been explored. However, it still remains to be ascertained whether somaclonal variation differs between callus-derived chromosome-doubled and undoubled regenerants. Our research aimed at investigating, through amplified fragment length polymorphism (AFLP) markers, the genetic changes in marker-banding patterns of diploid and tetraploid regenerants obtained from one clone each of Solanum bulbocastanum Dunal and S. cardiophyllum Lindl (both 2n = 2x = 24) and tetraploids from cultivated S. tuberosum L. (2n = 4x = 48). Pairwise comparisons between the banding patterns of regenerants and parents allowed detecting considerable changes associated to in vitro culture both at diploid and tetraploid level. The percentages of polymorphic bands between diploid and tetraploid regenerants were, respectively, 57 and 69% in S. bulbocastanum and 58 and 63% in S. cardiophyllum. On average, the frequencies of lost parental fragments in regenerants were significantly higher than novel bands both in S. bulbocastanum (48 vs. 22%) and S. tuberosum (36 vs. 18%) regenerants. By contrast, in S. cardiophyllum, a similar incidence of the two events was detected (32 vs. 29%). Our results revealed that structural changes after tissue culture process strongly affected the genome of the species studied, but diploid and tetraploids regenerated plants responded equally.

The Actual Distributing States of the Fresh Wild Vegetables in the Five-Day Traditional Markets of the Southern Districts in Korea (남부지방 5일장에서 신선 산채류의 유통 실태)

  • Bae Jong Hyang;Cho Ja Yong;Yang Seung Yul;Kim Byoung Woon;Jang Hong Gi;Chon Sang Uk;Heo Buk Gu
    • The Korean Journal of Community Living Science
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    • v.16 no.3
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    • pp.17-24
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    • 2005
  • This study was carried out to investigate the kinds of fresh wild vegetables, the number of street stalsl, seller's age, and the selling list of items of the street stall in the five-day traditional markets of Gyeongnam Tongyoung and Namhae, Jeonnam Naju and Younggwang, Jeonbuk Iksan and Jangsu, from March to May, 2005. The number of street stalls selling fresh wild vegetables was forty nine in Tongyoung, twenty five in Namhae, thirty in Naju, eighteen in Younggwang, one hundred and thirty in Iksan, and seventeen in Jangsu. The selling lists of items totaled forty items; thirty in Tongyoung, seventeen in Namhae, twenty in Naju, sixteen in Younggwang, twenty seven in Iksan, and thirteen in Jangsu. The main kinds were Aster scaber, Aralia elata, Pteridium aquilinum var. latusculum, Artemisia princeps, Sedum sarmentosum, Oenanthe javanica, Pla쇼codon grandiflorum, Petasites japonicus and Allium monanthum. sprouts or woody plants such as Arazia elate, Ailanthus altissima, Meliosma oldhamii, and Kalopanax pictus were also being sold. About $80{\%}$ of the sellers were over fifty one years old. Half of the sellers were at least sixty years old. More thab $77\%$ of the street stalls in the traditional markets sell fewer than four kinds of fresh wild vegetables.

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Comparative Genetic Diversity in Natural and Hatchery Populations of Indian Major Carps (C. catla and L. rohita)

  • Rana, R.S.;Bhat, K.V.;Lakhanpal, S.;Lakra, W.S.
    • Asian-Australasian Journal of Animal Sciences
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    • v.17 no.9
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    • pp.1197-1203
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    • 2004
  • This study deals with the characterization of three populations (two hatchery and one natural) of Indian major carps Catla catla and Labeo rohita from different locations in India. The genetics of Indian major carps has been completely obscure and this is the first report on comparative allozyme variations in natural and hatchery population. The total 10 biochemical genetic markers used to measure interspecific and intraspecific level of diversity. The allele frequency data indicate different level of genetic variability in three populations. The hatchery population exhibited least polymorphism, low level of heterozygosity and genetic diversity.

Prospects of Application of Linkage Disequilibrium Mapping for Crop Improvement in Wild Silkworm (Antheraea mylitta Drury)

  • Vijayan, Kunjupillai;Singh, Ravindra Nath;Saratchandra, Beera
    • International Journal of Industrial Entomology and Biomaterials
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    • v.20 no.2
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    • pp.37-43
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    • 2010
  • The wild silkworm, Antheraea mylitta Drury (Lepidoptera: Saturniidae) is a polyphagous silk producing insect that feeds on Terminalia arjuna, T. tomentosa and Shorea robusta and is distributed in the forest belts in different states of India. Phenotypically distinct populations of the A. mylitta are called "eco-race" or "ecotypes". Genetic improvement of this wild silkworm has not progressed much due to lack of adequate information on the factors that control the expression of most of the economically important traits. Considering the amazing technological advances taking place in molecular biology, it is envisaged that it is now possible to take greater control on these intractable traits if a combination of genetic, molecular and bioinformatics tools are used. Linkage disequilibrium (LD) mapping is one such approach that has extensively been used in both animal and plant system to identify quantitative trait loci (QTLs) for a number of economically important traits. LD mapping has a number of advantages over conventional biparental linkage mapping. Therefore, LD mapping is considered more efficient for gene discovery to meet the challenge of connecting sequence diversity with heritable phenotypic differences. However, care must be taken to avoid detection of spurious associations which may occur due to population structure and variety interrelationships. In this review, we discuss how LD mapping is suitable for the dissection of complex traits in wild silkworms (Antheraea mylitta).

Expression of the S glycoprotein of transmissible gastroenteritis virus (TGEV) in transgenic potato and its immunogenicity in mice

  • Ahn, Dong-Joo;Youm, Jung Won;Kim, Suk Weon;Yoon, Won Kee;Kim, Hyoung Chin;Hur, Tai-Young;Joung, Young Hee;Jeon, Jae-Heung;Kim, Hyun Soon
    • Korean Journal of Veterinary Research
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    • v.53 no.4
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    • pp.217-224
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    • 2013
  • Transgenic plants have been tested as an alternative host for the production and delivery of experimental oral vaccines. Here, we developed transgenic potatoes that express the major antigenic sites A and D of the glycoprotein S from transmissible gastroenteritis coronavirus (TGEV-$S_{0.7}$) under three expression vector systems. The DNA integration and mRNA expression level of the TGEV-$S_{0.7}$ gene were confirmed in transgenic plants by PCR and northern blot analysis. Antigen protein expression in transgenic potato was determined by western blot analysis. Enzyme-linked immunosorbent assay results revealed that based on a dilution series of Escherichia coli-derived antigen, the transgenic line P-2 had TGEV-$S_{0.7}$ protein at levels that were 0.015% of total soluble proteins. We then examined the immunogenicity of potato-derived TGEV-$S_{0.7}$ antigen in mice. Compared with the wild-type potato treated group and synthetic antigen treated group, mice treated with the potato-derived antigen showed significantly higher levels of immunoglobulin (Ig) G and IgA responses.

First Report of Cucumber mosaic virus Isolated from Wild Vigna angularis var. nipponensis in Korea

  • Kim, Mi-Kyeong;Jeong, Rae-Dong;Kwak, Hae-Ryun;Lee, Su-Heon;Kim, Jeong-Soo;Kim, Kook-Hyung;Cha, Byeongjin;Choi, Hong-Soo
    • The Plant Pathology Journal
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    • v.30 no.2
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    • pp.200-207
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    • 2014
  • A viral disease causing severe mosaic, necrotic, and yellow symptoms on Vigna angularis var. nipponensis was prevalent around Suwon area in Korea. The causal virus was characterized as Cucumber mosaic virus (CMV) on the basis of biological and nucleotide sequence properties of RNAs 1, 2 and 3 and named as CMV-wVa. CMV-wVa isolate caused mosaic symptoms on indicator plants, Nicotiana tabacum cv. Xanthi-nc, Petunia hybrida, and Cucumis sativus. Strikingly, CMV-wVa induced severe mosaic and malformation on Cucurbita pepo, and Solanum lycopersicum. Moreover, it caused necrotic or mosaic symptoms on V. angularis and V. radiate of Fabaceae. Symptoms of necrotic local or pin point were observed on inoculated leaves of V. unguiculata, Vicia fava, Pisum sativum and Phaseolus vulgaris. However, CMV-wVa isolate failed to infect in Glycine max cvs. 'Sorok', 'Sodam' and 'Somyeong'. To assess genetic variation between CMV-wVa and the other known CMV isolates, phylogenetic analysis using 16 complete nucleotide sequences of CMV RNA1, RNA2, and RNA3 including CMV-wVa was performed. CMV-wVa was more closely related to CMV isolates belonging to CMV subgroup I showing about 85.1-100% nucleotide sequences identity to those of subgroup I isolates. This is the first report of CMV as the causal virus infecting wild Vigna angularis var. nipponensis in Korea.

Current methodologies in construction of plant-pollinator network with emphasize on the application of DNA metabarcoding approach

  • Namin, Saeed Mohamadzade;Son, Minwoong;Jung, Chuleui
    • Journal of Ecology and Environment
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    • v.46 no.2
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    • pp.126-135
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    • 2022
  • Background: Pollinators are important ecological elements due to their role in the maintenance of ecosystem health, wild plant reproduction, crop production and food security. The pollinator-plant interaction supports the preservation of plant and animal populations and it also improves the yield in pollination dependent crops. Having knowledge about the plant-pollinator interaction is necessary for development of pesticide risk assessment of pollinators and conservation of endangering species. Results: Traditional methods to discover the relatedness of insects and plants are based on tracing the visiting pollinators by field observations as well as palynology. These methods are time-consuming and needs expert taxonomists to identify different groups of pollinators such as insects or identify flowering plants through palynology. With pace of technology, using molecular methods become popular in identification and classification of organisms. DNA metabarcoding, which is the combination of DNA barcoding and high throughput sequencing, can be applied as an alternative method in identification of mixed origin environmental samples such as pollen loads attached to the body of insects and has been used in DNA-based discovery of plant-pollinator relationship. Conclusions: DNA metabarcoding is practical for plant-pollinator studies, however, lack of reference sequence in online databases, taxonomic resolution, universality of primers are the most crucial limitations. Using multiple molecular markers is preferable due to the limitations of developed universal primers, which improves taxa richness and taxonomic resolution of the studied community.

The Relationship Between the Locational Types and Biodiversity in the Sites of Geumgang Riparian Ecological Belts

  • Kang, Hyun-Kyung
    • Journal of People, Plants, and Environment
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    • v.23 no.3
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    • pp.293-304
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    • 2020
  • Background and objective: This study was carried out to assess the relationship between the internal and external environments and the ecological items in five sites with a high level of artificial use intensity prior to the establishment of Geumgang River riparian ecological belts. Methods: The sites were classified into forest type, cultivated land type and urbanized type in accordance with their respective locational types. Ecological items including plant ecology such as proportion, naturalization index and urbanization index of native species were analyzed and animal ecology such as the number of species and population of wild birds, amphibians and reptiles, mammals, and butterflies and dragonflies, which are indicator insects, were investigated. In addition, species diversity indices of wild birds, butterflies and dragonflies found in all the subject lands were computed. Results: Among the plant ecological items, the ratio of native species in the forest type was higher than 90%, which was a satisfactory level, while the naturalization and urbanization indices were less than 10%. The number of species in the animal ecological characteristics was reduced in the order of forest type, cultivated land type and urbanized type. As the results of correlation analysis, the internal area of the planted area showed a negative correlation with the total of individuals. The area of grasslands showed a positive correlation with the number of dragonfly species and the total number of individuals, thereby illustrating that wet grasslands have positive effects. The area of surrounding forests, as an external environment, had a negative correlation with the urbanization index (UI) but a positive correlation with the inhabitation of butterflies and the total number of species. Conclusion: The results confirmed the need for more diversified special compositions including planted land, grassland, wetland, bodies of water and waterways within the subject land in the wetland ecological belt along with the need for surrounding forest location and preservation from the perspective of purchase and restoration of land for enhancement of wider biodiversity in the future.