• Title/Summary/Keyword: WASP gene

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A Case of Wiskott-Aldrich Syndrome with Novel Mutation in Exon 2 of the WASP Gene (WASP 유전자의 Exon 2에서 새로운 돌연변이를 가진 Wiskott-Aldrich 증후군의 1례)

  • Lee, Hyuk;Park, Jung-In;Kim, Sun Young;Moon, Kyeung Hee;Yi, Ho Keun;Hwang, Pyeong Han
    • Clinical and Experimental Pediatrics
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    • v.48 no.5
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    • pp.551-556
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    • 2005
  • Wiskott-Aldrich syndrome(WAS) is an X-linked recessive immunodeficiency characterized by thrombocytopenia with small platelet volume, eczema, and recurrent infections, and is also characterized by increased incidence of auto immune diseases and malignancies. The phenotype observed in this syndrome is caused by mutation in the Wiskott-Aldrich syndrome protein(WASP) gene localized to the proximal short arm of the X chromosome and recently isolated through positional cloning. The gene encodes a 502 amino acid protein, which contains 12 exons and spans 9 kb of genomic DNA. The function of the encoded protein is not well understood. The clinical diagnosis of WAS can be difficult and is usually confirmed by the detection of WASP gene mutations and the expression of WSAP in patient blood sample using genetic analysis. We reported a case of a 13-month old boy with WAS who was identified with the novel mutation in exon 2 of WASP gene by direct sequencing and the complete absence of WASP expression by immunoblotting.

Water Quality Management using WASPS & WASP Builder for a Basin of an Agricultural Reservoir (WASP5 & WASP Builder을 이용한 농업용저수지 유역의 수질관리)

  • Chung, Paul-Gene;Goh, Hong-Seok;Hyun, Mi-Hee;Lee, Eun-Ju
    • Journal of Korean Society on Water Environment
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    • v.20 no.5
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    • pp.422-431
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    • 2004
  • Water quality modeling was performed for the purpose of diagnosis and prediction of water quality in Gyoung Choen reservoir, using EUTR05/WASP Build model. WASP Builder is capable of visual display in window and it has an advantage of updating and modification for data. Field data of 1992, Spring, Summer, and Fall, were used to calibrate model and these results were validated using data of 2000, Spring, Summer, and Fall. The reservoir was divided into 4 epilimnion segments. Water quality system for modeling were consist of BOD, Chlorophyll-a, DO, $NH_3-N$, $NO_3-N$, T-N, $PO_4-P$, T-P. The results of water quality modelling using EUTR05/WASP Builder, a range of the Correlation for calibration of BOD, T-N, T-P, and Chlorophyll-a according to three seasons are 0.63~0.90, 0.81~0.97, 0.75~0.98, and 0.77~0.98 respectively. And the correlation between simulated and observed values for verification of BOD, T-N, T-P, and Chlorophyll-a according to three seasons are 0.93, 0.94, 0.81, and 0.80 respectively. Among the pollutant sources for a basin of the Gyoung Choen reservoir, generated amount of livestock is the highest and BOD, T-N, T-P of generated loading percentage are 94%, 81%, and 95%. So, we suppose that inflow load amount will decrease 50% and increase 50% only livestock about current load amount. If increasing load amount of livestock 50% in segment 2 and 3, BOD, T-N, and T-P simulated increasing to range of $0.02~0.15mg/{\ell}$, $0.029~0.08mg/{\ell}$, $0.011~0.029mg/{\ell}$ in comparison with current water quality

Genomic Structure of the Cu/Zn Superoxide Dismutase(SOD1) Gene from the Entomopathogenic Fungus, Cordyceps pruinosa

  • Park, Nam Sook;Jin, Byung Rae;Lee, Sang Mong
    • International Journal of Industrial Entomology and Biomaterials
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    • v.39 no.2
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    • pp.67-73
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    • 2019
  • The genomic structure of the Cu/Zn superoxide dismutase (SOD1) gene from the entomopathogenic fungus, Cordyceps pruinosa was characterized. The SOD1 gene of C. pruinosa spans 947 nucleotides and consisted of four exons encoding for 154 amino acids and three introns. Four exons of the SOD1 gene are composed of 13, 331, 97 and 20 nucleotides respectively. Homology search of amino acid sequences of the SOD1 gene of C. pruinosa with another 13 fungi species showed higher sequence similarity of 69% ~ 95% and had the most highest sequence identity of 95% with Beauveria bassiana and Cordyceps militaris, which can easely infect domesticated Bombyx mori and another wild lepidopteran species in artificial or natual manner of infection. This SOD1 gene sequence showed copper, zinc and beta-barrel fold sites. Homology search showed that the Cu/Zn SOD1 gene from the entomopathogenic fungus, C. pruinosa is an orthologous gene homolog present in different species of organism whose ancestor predates the split between the relating species. In addition, C. pruinosa SOD1 gene is placed together within the ascomycetes group of fungal clade. From these results it is concluded that C. pruinosa SOD1 gene is orthologous gene having the same or very similar functions with a common evolutionary ancestor.

A Technique of Segment Expression and RNA Interference (SERI) Reveals a Specific Physiological Function of a Cysteine-Rich Protein Gene Encoded in Cotesia plutellae Bracovirus

  • Barandoc, Karen;Kim, Yong-Gyun
    • Journal of Microbiology and Biotechnology
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    • v.19 no.6
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    • pp.610-615
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    • 2009
  • As a provirus, polydnavirus has a segmented DNA genome on chromosome(s) of host wasp. It contains several genes in each segment that presumably play critical roles in regulating physiological processes of target insect parasitized by the wasp. A cysteine-rich protein 1 (CRP1) is present in the polydnavirus Cotesia plutellae bracovirus (CpBV) genome, but its expression and physiological function in Plutella xylostella parasitized by the viral host C. plutellae is not known. This CpBV-CRP1 encoding 189 amino acids with a putative signal peptide (20 residues) was persistently expressed in parasitized P. xylostella with gradual decrease at the late parasitization period. Expression of CpBV-CRP1 was tissue-specific in the fat body/epidermis and hemocyte, but not in the gut. Its physiological function was analyzed by inducing transient expression of a CpBV segment containing CpBV-CRP1 and its promoter, which caused significant reduction in hemocyte -spreading and delayed larval development. When the treated larvae were co-injected with double-stranded RNA of CpBV-CRP1, the expression of CpBV-CRP1 disappeared, whereas other genes encoded in the CpBV segment was expressed. These co-injected larvae significantly recovered the hemocyte-spreading capacity and larval development rate. This study reports that CpBV-CRP1 is expressed in P. xylostella parasitized by C. plutellae and its physiological function is to alter the host immune and developmental processes.

Gene Expression Changes Associated with Sustained p16 Expression in Hepatocellular Carcinoma Cells (간암세포주에서 지속적인 p16 단백질발현이 유도하는 유전자발현의 변화)

  • Oh, Sang-Jin;Im, Ji-Young;Jung, Che-Hun;Lee, Yong-Bok
    • IMMUNE NETWORK
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    • v.4 no.4
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    • pp.237-243
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    • 2004
  • Background: The normal functions of the cell cycle inhibitor p16INK4a are frequently inactivated in many human cancers. Over 80% of hepatocellular carcinoma (HCC) cases lack a functional p16/Rb pathway. p16/Rb pathway, as well as p53 pathway, is considered as one of key components of tumor suppression. Methods: To study the roles of p16INK4a in HCC, a stable cell line expressing exogenous p16 was generated from SNU-449 hepatocellular carcinoma cells lacking endogenous p16, and suppression subtractive hybridization (SSH) was performed in parallel with the control cells. Results: 1) SSH identifies fibronectin (FN1), crystallin ${\alpha}B$ (CRYAB), Rac1, WASP, RhoGEF, and CCT3 as differentially-expressed genes. 2) Among the selected genes, the up-regulation of FN1 and CRYAB was confirmed by Northern blot, RT-PCR and by proteomic methods. Conclusion: These genes are likely to be associated with the induction of stress fiber and stabilization of cytoskeleton. Further studies are required to clarify the possible role of p16 in the signal transduction pathway.

Gene Structure of Cotesia plutellae Bracovirus (CpBV)-$I_{k}B$ and Its Expression Pattern in the Parasitized Diamondback Moth, Plutella xylostella (프루텔고치벌 브라코바이러스(Cotesia plutellae Bracovirus) 유래 $I_{k}B$ 유전자 구조와 피기생 배추좀나방(Plutella xylostella) 체내 발현 패턴)

  • Kim Yong-Gyun;Basio Neil A.;Ibrahim Ahmed M.A.;Bae Sung-Woo
    • Korean journal of applied entomology
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    • v.45 no.1 s.142
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    • pp.15-24
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    • 2006
  • Inhibitor kB (IkB)-like gene has been found in the genome of Cotesia plutellae bracovirus (CpBV), which is the obligatory symbiont of an endoparsitoid wasp, C. plutellae. The open reading frame of CpBV-IkB was 417 bp and encoded 138 amino acids. Four ankyrin repeat domains were found in CpBV-IkB, which shared high homology with other known polydnavirus IkBs. Considering a presumptive cellular IkB based on Drosophila Cactus, CpBV-IkB exhibited a truncated structure with deletion of signal-receiving domains, which suggested its irreversible inhibitory role in NFkB signal transduction pathway of the parasitized host in response to the wasp parasitization. CpBV-IkB was expressed only in the parasitized diamondback moth, Plutella flostella. Its expression was estimated by quantitative RT-PCR during parasitization period, showing a constitutive expression pattern from the first day of parasitization. An indirect functional analysis of CpBV-IkB was conducted and suggested a hypothesis of host antivirus inhibition.

Polydnavirus and Its Novel Application to Insect Pest Control (폴리드나바이러스와 새로운 해충방제 전략)

  • Kim, Yong-Gyun
    • Korean journal of applied entomology
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    • v.45 no.3 s.144
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    • pp.241-259
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    • 2006
  • Polydnavirus is a mutualistic DNA virus found in some braconid and ichneumonid wasps. Its genome is integrated into host chromosome as a provirus. Its replication occurs at ovarian calyx epithelium during host pupal stage to form episomal viral particles. The viral particles are delivered into hemocoel of the parasitized insect along with eggs during wasp oviposition. Several polydnaviral genomes, which are isolated from the episomal virus particles, have been sequenced and exhibit some gene families with speculative physiological functions. This review presents the viral characteristics in terms of Its parasitic physiology. For developing new insect pest control tactics, it also discusses several application strategies exploiting the viral genome to manipulate insect physiology.

Insect Resistance of Tobacco Plant Expressing CpBV-ELP1 Derived from a Polydnavirus (폴리드나바이러스 유래 CpBV-ELP1 발현 담배의 내충성)

  • Kim, Eunseong;Kim, Yonggyun
    • Korean journal of applied entomology
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    • v.56 no.1
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    • pp.19-28
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    • 2017
  • Polydnaviruses (PDVs) are a group of double-stranded DNA viruses symbiotic to some endoparasitoid wasps. Cotesia plutellae bracovirus (CpBV) is a PDV symbiotic to an endoparasitoid wasp, C. plutellae, parasitizing young larvae of Plutella xylostella. An early expressed gene, CpBV-ELP1, plays an important role in the parasitism by suppressing host cellular immunity by its cytotoxic activity against hemocytes. This study aimed to test its oral toxicity against insect pest by expressing it in a recombinant tobacco plant. A recombinant CpBV-ELP1 protein was produced using a baculovirus expression system and secreted to cell culture medium. The cell cultured media were used to purify CpBV-ELP1 by a sequential array of purification steps: ammonium sulfate fractionation, size exclusion chromatography, and ion exchange chromatography. Purified rCpBV-ELP1 exhibited a significant cytotoxicity against Spodoptera exigua hemocytes. CpBV-ELP1 was highly toxic to the fifth instar larvae of S. exigua by injection to hemocoel. It also showed a significant oral toxicity to fifth instar larvae of S. exigua by a leaf-dipping assay. CpBV-ELP1 was cloned into pBI121 vector under CaMV 35S promoter with opaline synthase terminator. Resulting recombinant vector (pBI121-ELP1) was used to transform Agrobacterium tumefaciens LBA4404. The recombinant bacteria were then used to induce callus of a tobacco (Nicotiana tabacum Xanthi) leaves and subsequent generation (T1) plants were selected. T1 generation tobacco plants expressing CpBV-ELP1 gave significant insecticidal activities against S. exigua larvae. These results suggest that CpBV-ELP1 gene can be used to control insect pests by constructing transgenic crops.

WISKOTT-ALDRICH SYNDROME WITH DENTAL PROBLEMS : CASE REPORT (Wiskott-Aldrich 증후군 환아의 증례보고)

  • Lee, Yeon-Joo;Hyun, Hong-Keun;Jang, Chul-Ho;Kim, Yeong-Jae;Kim, Jung-Wook;Jang, Ki-Taek;Kim, Chong-Chul;Hahn, Se-Hyun;Lee, Sang-Hoon
    • Journal of the korean academy of Pediatric Dentistry
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    • v.34 no.3
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    • pp.468-472
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    • 2007
  • The Wiskott-Aldrich Syndrome (WAS) is an inherited immunodeficiency caused by a variety of mutations in the gene encoding the WAS protein (WASp). First described in 1937 by Wiskott, the incidence of WAS has so far been estimated at 4 in 106 live births. The Wiskott-Aldrich Syndrome is an X-linked condition characterized by 1) an increased tendency to bleed caused by a reduced number of platelets, 2) recurrent bacterial, viral and fungal infections, and 3) eczema of the skin. The purpose of this report is to present cases highlighting the clinical features of the syndrome and the required considerations in the treatment of patients. The report consists of two particular cases: a 2-year-11-month-old boy seen for a routine oral examination prior to his bone marrow transplantation and a 2-year-6-month-old boy with herpes gingivostomatitis and teeth discoloration.

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Improvement of Productivity by Forest Tree Breeding Work in Korea (우리나라에서의 임목육종(林木育種)에 의(依)한 생산성(生産性) 증가(增加))

  • Ryu, Jang Bal;Shim, Sang Yung
    • Journal of Korean Society of Forest Science
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    • v.77 no.4
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    • pp.382-388
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    • 1988
  • Improvement of productivity by forest tree breeding work in Korea was estimated for a few important tree species. Progenies of 17 plus trees of red pine (Pines densiflora) outgrew by 57 percentage compared with progenies of unselected trees at age 15. If best three families are selected among the 17, more than double in volume grow-th is expected. The hybrid Pinus rigida ${\times}$ P. taeda showed more than double volume growth compare to P. rigida at a southern plantation at age 15. However, the superiority of the hybrid decreased at northern plantations, mainly because of low coldhardiness of the hybrid. At a northern plantation, the hybrid grew less than the P. rigida on upper hill, while the hybrid grew much better than the P. rigida on flat area. Another hybrid Populus alba ${\times}$ P. glandulosa grew faster than both parents by two to two and half times according to planting sites at age 10. Introduction of Pinus rigida also showed increased volume growth. Volume increase by selection of best five provenances among 45 at age 12 was estimated as 53 percent compare to progenies of plus trees in Korea, Additional 19 percent of volume increase was expected by selection of the best families within the best provenances. Annual production of chestnuts reached about 70,000 M/T by planting resistant clones to chestnut gall wasp (Dryocosmus kuriphilus), which killed almost all susceptible trees. Although polyploid trees and mutants have been produced by colchicine treatments in over 10 tree species, none of them is economically important Remarkable improvement of productivity is expected by biotechnology in future through selection, hybridization, introduction of foreign genes at cell, cell organelle and gene level, and gene transformation. At present, mass propagation of superior planting materials by tissue culture will increase the productivity.

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