• Title/Summary/Keyword: Unknown virus

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Prevalence and Genotypes of Transfusion-Transmitted Virus in Children with Hepatitis and Normal Control (정상 소아와 간염 환자에서 Transfusion-Transmitted Virus의 감염상태와 유전자형)

  • Chung, Ju Young;Han, Tae Hee;Hwang, Eung Soo;Ko, Jae Sung;Seo, Jeong Kee
    • Pediatric Gastroenterology, Hepatology & Nutrition
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    • v.8 no.2
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    • pp.202-212
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    • 2005
  • Purpose: Transfusion transmitted virus (TTV) is a newly discovered virus and to date the contribution of TTV to liver disease remains unclear. Little is known about the frequency of TTV infection in children in Korea. The purpose of this study was to investigate the prevalence and genotypic distribution of TTV carried by healthy children and patients with hepatitis in Korea. Methods: Eighty eight of healthy children and three groups of patients with hepatitis-14 patients with chronic hepatitis B, 12 patients with chronic hepatitis C and 25 patients with hepatitis of unknown etiology-were tested. TTV DNA was detected by semi-nested PCR using primer sets generated from N-22 region and from 5' noncoding region (NCR) of the viral genome. PCR products derived from 8 patients with hepatitis and from 11 healthy children were sequenced and a phylogenetic tree was constructed. Results: TTV was found by PCR with N22 primer in 11.3% of healthy children, 28.5% of children with hepatitis B, 25% of children with hepatitis C, 24% of children with hepatitis of unknown etiology. TTV DNA was found by PCR with 5'NCR primer in 32.9% of healthy children, 71.4% of patients with chronic hepatitis B, in 50% of patients with hepatitis C and in 48% of patients with hepatitis of unknown etiology. TLMV DNA was found in 48.9% of healthy children, 21.4% of patients with hepatitis B, 16.6% of patients with hepatitis C, 40% of patients with hepatitis of unknown etiology. Among the sequenced isolates, 10(52%) belonged to genotype 1 (G1) and others belonged to genotype 2 (G2) or genotype 3 (G3). Among the G1 sequences, 7 were grouped as G1a. Conclusion: TTV infection was common in healthy children and in patients with hepatitis. But, the prevalence of TTV DNA by 5'NCR primer was relatively high in patients with hepatitis B and there may be some association between TTV and hepatitis B virus infection. G1 was the major genotype of the studied population.

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A Study on the Validation system of Detection for Biological Agents Using Real-Time PCR (실시간 중합효소 연쇄반응을 활용한 생물작용제 검증시스템 연구)

  • Cha, Younggil;Koo, Bonwoo;Kim, Seongjoo;Kim, Namil;Park, Hanoh
    • Journal of the Korea Institute of Military Science and Technology
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    • v.20 no.5
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    • pp.726-732
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    • 2017
  • Bacillus anthracis, Vibrio cholerae, Variola virus and Shigella dysenteriae are classified as category A and B biological weapons. In this study suggest that 4 genes of Bacillus anthracis, 2 genes of Vibrio cholerae, 1 gene of Variola virus and 1 gene of Shigella dysenteriae were detective 50~500 fg of target DNA per reaction using real-time PCR based assay. Also analytical specificity did not show any cross-reactivity with other related bacteria. Reliable and one reaction could be effective early diagnostic and treatment for detection of unknown samples.

Interference of Fisetin with Targets of the Nuclear Factor-κB Signal Transduction Pathway Activated by Epstein-Barr Virus Encoded Latent Membrane Protein 1

  • Li, Rong;Liang, Hong-Ying;Li, Ming-Yong;Lin, Chun-Yan;Shi, Meng-Jie;Zhang, Xiu-Juan
    • Asian Pacific Journal of Cancer Prevention
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    • v.15 no.22
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    • pp.9835-9839
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    • 2014
  • Fisetin is an effective compound extracted from lacquer which has been used in the treatment of various diseases. Preliminary data indicate that it also exerts specific anti-cancer effects. However, the manner in which fisetin regulates cancer growth remains unknown. In this study, we elucidated interference of fisetin with targets of the nuclear factor ${\kappa}B$ signal transduction pathway activated by Epstein-Barr virus encoding latent membrane protein 1 (LMP1)in nasopharyngeal carcinoma (NPC) cells, Results showed that fisetin inhibited the survival rate of CNE-LMP1 cells and NF-${\kappa}B$ activation caused by LMP1. Fisetin also suppressed nuclear translocation of NF-${\kappa}B$ (p65) and $I{\kappa}B{\alpha}$ phosphorylation, while inhibiting CyclinD1, all key targets of the NF-${\kappa}B$ signal transduction pathway. It was suggested that interference effects of fisetin with signal transduction activated by LMP1 encoded by the Epstein-Barr virus may play an important role in its anticancer potential.

Differentially expressed genes in Penaeus monodon hemocytes following infection with yellow head virus

  • Pongsomboon, Siriporn;Tang, Sureerat;Boonda, Suleeporn;Aoki, Takashi;Hirono, Ikuo;Yasuike, Motoshige;Tassanakajon, Anchalee
    • BMB Reports
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    • v.41 no.9
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    • pp.670-677
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    • 2008
  • A cDNA microarray composed of 2,028 different ESTs from two shrimp species, Penaeus monodon and Masupenaeus japonicus, was employed to identify yellow head virus (YHV)-responsive genes in hemocytes of P. monodon. A total of 105 differentially expressed genes were identified and grouped into five different clusters according to their expression patterns. One of these clusters, which comprised five genes including cathepsin L-like cysteine peptidase, hypothetical proteins and unknown genes, was of particular interest because the transcripts increased rapidly ($\leq$ 0.25 hours) and reached high expression levels in response to YHV injection. Microarray data were validated by realtime RT-PCR analyses of selected differentially expressed transcripts. In addition, comparative analysis of the hemocyte transcription levels of three of these genes between surviving and non-surviving shrimp revealed significantly higher expression levels in surviving shrimp.

A Rapid and Efficient Method for Construction of an Infectious Clone of Tomato yellow leaf curl virus

  • Bang, Bongjun;Lee, Jongyun;Kim, Sunyoung;Park, Jungwook;Nguyen, Thao Thi;Seo, Young-Su
    • The Plant Pathology Journal
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    • v.30 no.3
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    • pp.310-315
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    • 2014
  • Tomato yellow leaf curl virus (TYLCV), a member of the genus Begomovirus, is responsible for one of the most devastating viral diseases in tomato-growing countries and is becoming a serious problem in many subtropical and tropical countries. The climate in Korea is getting warmer and developing subtropical features in response to global warming. These changes are being accompanied by TYLCV, which is now becoming a large problem in the Korean tomato industry. The most effective way to reduce damage caused by TYLCV is to breed resistant varieties of tomatoes. To accomplish this, it is necessary to establish a simple inoculation technique for the efficient evaluation of resistance to TYLCV. Here, we present the rolling circle amplification (RCA) method, which employs a bacteriophage using phi-29 DNA polymerase for construction of infectious TYLCV clones. The RCA method is simple, does not require sequence information for cloning, and is less expensive and time consuming than conventional PCR based-methods. Furthermore, RCA-based construction of an infectious clone can be very useful to other emerging and unknown geminiviruses in Korea.

Phenobarbital and zonisamide treatment of a cat with epilepsy of unknown cause

  • Lee, Ki-Ho;Park, Jun-Seok;Kim, Jung-Kook;Seo, Kyoung-Won;Song, Kun-Ho
    • Korean Journal of Veterinary Service
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    • v.40 no.2
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    • pp.143-147
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    • 2017
  • A Korean domestic short hair (1-year-old, male) presented with 2 to 3 weeks of seizures, aggressive behavior, vomiting, anorexia, and lethargy. The frequency of seizure had gradually increased from once a week to once every 3 hours. Physical and neurologic examination, diagnostic screening tests, including complete blood count (CBC), serum chemistry, electrolyte, coagulation test, X-ray, ultrasonography, and urinalysis were performed. Feline Leukemia Virus (FeLV), Feline Immunodeficiency Virus (FIV) and Toxoplasma spp. All tested negative, but the Feline Corona Virus (FCoV) kit revealed a positive result. To determine the exact diagnosis, magnetic resonance imaging (MRI) was performed but yielded no specific findings. The patient was then diagnosed with idiopathic epilepsy and treatment of phenobarbital was initiated. A month's treatment with phenobarbital proved ineffective as symptoms worsened. Zonisamide was then selected as an additional anticonvulsant. After adding zonisamide, symptoms improved, and seizures abated for 15 months. This is the first case report in South Korea describing the use of phenobarbital and zonisamide in the treatment of a cat with idiopathic epilepsy.

Detection of Toxoplasma gondii Infections using Virus-Like Particles Displaying T. gondii ROP4 Antigen

  • Kim, Min-Ju;Mao, Jie;Kang, Hae-Ji;Chu, Ki-Back;Quan, Fu-Shi
    • Parasites, Hosts and Diseases
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    • v.59 no.6
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    • pp.565-572
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    • 2021
  • Toxoplasma gondii ME49 infections are typically diagnosed by serological tests. However, serological diagnosis of RH strain-induced toxoplasmosis remains unknown. In order to develop seradiagnosis of above 2 kinds of infections, we generated recombinant virus-like particles (VLPs) displaying the T. gondii rhoptry protein 4 (ROP4) and evaluated their potential in T. gondii ME49 or RH strain infection diagnostics. Mice were orally infected with either the tachyzoites of T. gondii (RH) or cysts of T. gondii (ME49) at various dosages, and sera were collected at regular intervals. ELISA-based serological tests were performed to assess IgG, IgM, and IgA antibody responses against ROP4 VLP antigen and tissue lysate antigen (TLA). Compared to TLA, IgG, IgM, and IgA levels to ROP4 VLP antigen were significantly higher in the sera of T. gondii RH-infected mice 1 and 2 week post-infection (PI). T. gondii-specific IgG antibody was detected at 1, 2, 4, and 8 week PI in the T. gondii ME49-infected mice with infection dose-dependent manner. These results indicated that the ROP4 VLP antigen was highly sensitive antigens detecting T. gondii RH and ME49 antibodies at an early stage.

The Design of Immune System for Blocking unknown Worm Virus Spreading (Unknown 웜바이러스 확산 방지를 위한 면역시스템 설계)

  • Kim, D.H.;Lim, M.H.;Oh, G.T.;Kim, P.K.
    • Proceedings of the Korea Information Processing Society Conference
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    • 2001.10b
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    • pp.1025-1028
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    • 2001
  • 인터넷의 확산과 이용자의 급증으로 웜바이러스에 대한 문제가 최근에 크게 대두되고 있다. 스크립트 형 웜바이러스의 경우 제작이 쉬워 누구나 몇 시간의 학습을 통하여 바이러스를 제작찬 수 있다. 이러한 문제의 심각성은 최근 7개월 동안의 바이러스 통계에서도 나타나는데 전체 바이러스 중 평균 22.5%를 차지하고 있다. 이러한 웜바이러스를 차단하기 위해서 여러 가지 방법들이 사용되고 있으나 E-mail로 급속하게 퍼지는 웜바이러스의 확산을 차단하기 위해서 네트워크 기반의 시스템 보호방법이 요구되어지고 있다. 이에 본 논문에서는 알려지지 않은 웜바이러스로부터 내부 네트워크를 방어하기 위한 면역시스템을 제안한다. 자동화된 면역 시스템은 분산된 각각의 웜바이러스 탐지 시스템들이 새로운 바이러스 정보를 동적으로 공유할 수 있도록 하여 새로운 바이러스로부터 해당 시스템과 그 시스템이 속해 있는 내부 네트워크를 바이러스로부터 보호할 수 있도록 한다.

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Virus Disease Incidences of Sweet Potatoes in Korea

  • Kwak Hae-Ryun;Kim Mi-Kyeong;Chung Mi-Nam;Lee Su-Heon;Park Jin-Woo;Kim Kook-Hyung;Choi Hong-Soo
    • The Plant Pathology Journal
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    • v.22 no.3
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    • pp.239-247
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    • 2006
  • In 2003, a survey of sweet potato virus disease was carried out in seed boxes as well as in various sweet potato fields. Virus infection rate was $5\sim100%$ and 100% at seed boxes and fields, respectively. No relationship of the disease incidence and severity was observed between sweet potato cultivating areas and cultivars. A total of 179 samples were collected and analyzed based on serological, electron microscopic and molecular properties. Field-grown sweet potatoes were examined to inspect 8 different viruses using NCM-ELISA, resulting that 30% of sweet potato was infected by one virus, whereas 70% was by more than 2 viruses. However, RT-PCR using primers selected for seven viruses, such as Sweet potato feathery mottle virus (SPFMV) revealed that of one-hundred seventy-nine tested; 71 of SPFMV, 29 of SPGV, 19 of SPFMV+SPGV, 1 of SPFMV+SwPLV, 1 of SPFMV+SPLCV, 2 of SPFMV+SPGV+SwPLV, 6 of SPFMV+SPGV+SPLCV, 2 of SPFMV+SPGV+SwPLV+SPLCV and 48 of unknown viruses were identified from the field samples. In root, viral diseases were severer in Yeoju than in Mokpo Experiment Station and infection rate was much different depending on sweet potato cultivars.

Induction of Interleukin-8 Expression in Synovial Cell by Hepatitis C Virus Core Protein (활막 세포에서 HCV Core 단백에 의한 Interleukin-8 발현 유도)

  • Wang, Jin-Sang;Her, Won-Hee;Kim, So-Yeon;Yoon, Seung-Kew
    • IMMUNE NETWORK
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    • v.6 no.1
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    • pp.20-26
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    • 2006
  • Background: Rheumatoid arthritis (RA) is a chronic and systemic inflammatory disease that is characterized by invasive synovial hyperplasia, leading to progressive joint destruction. Recent studies have described that RA is caused by virus, bacteria or outside material. Approximately 2 to 20% of RA cases arc reported to be associated with infected hepatitis C virus (HCV). However, the mechanisms underlying virus-induced RA are still unknown. Moreover, few molecular studies have addressed the inflammatory aspects of HCV-associated autoimmune RA. In this study, we aimed to determine whe ther or not another HCV core protein transactivates the IL-8 gene expression, prototypic chemokine, in synovial cell. Methods: To establish the HCV core expressing stable synovial cell line, pCI-neo-core, a plasmid encoding HCV core protein, were transfected to HIG-82 cell line that is an established cell line from rabbit periaricular soft tissue. We examined the morphological changes and cell cycle distribution of HIG-82 cells with expression of HCV core protein by inverted microscopy and flow cytometry analysis, respectively. Also, we determined the mRNA levels of Interleukin (IL)-6 and IL-8 related to the inflammation by RT-PCR and then analyzed regulation of IL-8 expression by the NF-${\kappa}B$ pathway. Results: Our study showed no significant differences in morphology and cell cycle between HIG-82 control cell line and HIG-82 expressing HCV core protein. However, expression of HCV core protein induces the IL-8 mRNA expression in HIG-82 core cells via activated NF-${\kappa}B$ pathway. Conclusion: These results suggest that HCV core protein can lead to enhanced IL-8 expression. Such a proinflammatory role may contribute to the etiologic pathogenesis in RA patients with HCV infection.