• Horticultural Science & Technology
• /
• v.35 no.3
• /
• pp.333-343
• /
• 2017

Bloomless cucumber fruits are commercially produced by grafting onto the pumpkin stocks (Cucurbita moschata) to restricted silicon ($SiO_2$) absorption. Inhibition of silicon absorption in bloomless stocks is conferred by a mutant allele of the CmLsi1 homologous to Lsi1 in rice. In this study, we characterized the Lsi1 homologs in pumpkin (C. moschata) and its cold-tolerant wild relative C. ficifolia ('Heukjong') in order to develop a DNA marker for selecting a bloomless trait and to establish the molecular basis for breeding bloomless stock cultivars of C. ficifolia. A Cleaved amplified polymorphic sequence (CAPS) marker (CM1-CAPS) was designed based on a non-sysnonymous single nucleotide polymorphism (SNP, C>T) of the CmLsi1 mutant-type allele, and its applicability for Marker-assisted selection (MAS) was confirmed by evaluating three bloom and five bloomless pumpkin stock cultivars. Quantitative RT-PCR of the CmLsi1 for these stock cultivers implied that expression level of the CmLsi1 gene does not appear to be associated with the bloom/bloomless trait and may differ depending on plant species and tissues. A full length cDNA of the Lsi1 homolog [named CfLsi1($B^+$)] of 'Heukjong' (C. ficifolia), was cloned and sequence comparison between CmLsi1($B^+$) and CfLsi1($B^+$) revealed that there exists total 24 SNPs, of which three were non-synonymous. Phylogenetic analysis of CfLsi1($B^+$) and Lsi1 homologs further revealed that CfLsi1($B^+$) is closesly related to Nodulin 26-like intrinsic proteins (NIPs) and most similar to CpNIP1 of C. pepo than C. moschata.

• Journal of Life Science
• /
• v.12 no.2
• /
• pp.188-199
• /
• 2002

A gene coding for xylanase from thermo-tolerant Bacillus pumilus TX703 was cloned into Escherichia coli DH5 $\alpha$ using pUC19. Among 7,400 transformants, four transformants showed clear zones on the detection agar plates containing oat-spells xylan. One of them which showed highest xylanase activity was selected and its recombinant plasmid, named pXES106, was found to carry 2.24 kb insert DNA fragment. When the nucleotide sequence of the cloned xylanase gene (xynK) was determined, xynK gene was found to consist of 1,227 base-pair open reading frame coding for a polypeptide of 409 amino acids with a deduced molecular weight of 48 kDa. The coding sequence was preceded by a putative ribosome binding site, the transcription initiation signals, and cia-acting catabolite responsive element. The deduced amino acids sequence of xylanase is similar to those of the xylanases from Hordeum vulgare (barley) and Clostridium thermocellum, with 39 and 31% identical residues, respectively. The amino acids sequence of this xylanase was quite different from those of the xylanases from other Bacillus species.

• Microbiology and Biotechnology Letters
• /
• v.35 no.2
• /
• pp.150-157
• /
• 2007

The advanced bioremediation of diesel-contaminated soil through the exploration of bacterial interaction with plants was studied. A diesel-degrading rhizobacterium, Rhodococcus sp.412, and a plant species, Zea mays, having tolerant against diesel was selected. Zea mays was seeded in uncontaminated soil or diesel-contaminated soil with or without Rhodococcus sp. 412. After cultivating for 30 days, the growth of Zea mays in the contaminated soil inoculated with Rhodococcus sp. 412 was better than that in the contaminated soil without the bacterium. The residual diesel concentrations were lowered by seeding Zea mays or inoculating Rhodococctis sp. 412. These results Indicate that the simultaneous use of Zea mays and Rhodococcus sp. 412 can give beneficial effect to the remediation of oil-contaminated soil. Bacterial community was characterized using a 16S rDNA PCR and denaturing gradient gel electrophoresis (DGGE) fingerprinting method. The similarities of DGGE fingerprints were $20.8{\sim}39.9%$ between the uncontaminated soil and diesel contaminated soil. The similarities of DGGE fingerprints were $21.9%{\sim}53.6%$ between the uncontaminated soil samples, and $31.6%{\sim}50.0%$ between the diesel-contaminated soil samples. This results indicated that the structure of bacterial community was significantly influence by diesel contamination.

• Korean Journal of Environment and Ecology
• /
• v.23 no.4
• /
• pp.285-293
• /
• 2009

This research had been executed to find out the structure of Magnolia obovata community, a dispersal range and characteristics of scatter investigation, and to prepare management measure of it. In the result of this study, Magnolia obovata was distributed in a native plant community from planting trees of UNESCO Peace Center. The maximum numbers of Magnolia obovata were found in $20{\sim}100m$ from trees of mother. Seed of Magnolia obovata has a characteristics of gravity dispersal. But some individuals was found in 420m from its tree of mother. Seeds of Magnolia obovata has a characteristics of animal dispersal, too. Major species of animal dispersal are Garrulus glandarius, Ciurus vulgaris coreae, and Tamias sibiricus asiaticus in the study site. The importance value between native plants and Magnolia obovata had a negative relation. Because Magnolia obovata is more shade tolerant than other trees. Also, the growth of Magnolia obovata is faster than other trees. And so if the influence of Magnolia obovata reduce, it is necessary to expand native plant community, and to cut Magnolia obovata over 10m of the height and over 10cm of the DBH, for preventing influence of Magnolia obovata.

• Korean Journal of Weed Science
• /
• v.7 no.2
• /
• pp.200-207
• /
• 1987

This study was conducted to select and develop herbicide resistant plant through tissue culture. Growth response of seedlings and callis of various rice varieties with Echinochloa species was assessed under the treatment of various rates of butachlor [N-(butoxy methyl)-2-chloro-2', 6'-diethyl acetamide] and simetryne [2,4-bis(ethyl amino)-6-methyl thio-1,3,5-triazine]. Further, succinate dehydrogenase activity was determined in herbicide treated callus to characterize different response of plants to herbicide. Rice variety like Sangpung showed relative resistance in both callus and seedling states against butachlor, indicating maintenance of resistance. However, in the simetryne treatment, the similar response was not observed in callus and seedling state, although there was a great different response among plant materials against simetryne. Rice variety which exhibited resistance in callus and seedling states showed low succinate dehydrogenase inhibition index. Succinate dehydrogenase inhibition index can be used as an important marker characters to differentiate varietal response of plant to herbicide. Rice plant was differentiated from butachlor and simetryne tolerant callus treated at $2.5{\times}10^{-5}$ M is growing under the growth chamber and can be used for resistant source.

• Korean Journal of Weed Science
• /
• v.13 no.1
• /
• pp.1-6
• /
• 1993

The experiments were conducted in order to find out the response of algae as affected by fertilizer and salinity, and to determine the chemical control method of algae in 1991. The higher the nitrogen fertilizer level, the more the occurrence of a blue-green alga Oscillatoria concerning with soil flakes. An increase in phosphorus fertilizer level stimulated the growth of green alga Hydrodictyon, whereas an increase in nitrogen level caused its abrupt reduction due to the harmful effect at high concentration of nitrogen, The high level of nitrogen fertilizer also reduced the growth of Euglena, although the detrimental effect was less compared with that of Hydrodictyon. A blue-green alga Oscillatoria, a green alga Cladophora and a diatom Navicula were tolerant to salinity. Piperophos/dimethametryn was highly effective in controlling various algae such as a green alga Hydrodictyon, suspended unicellular green algae and Euglena species. A fungicide propineb and copper sulfate also effectively controlled Hydrodictyon.

• Korean Journal of Soil Science and Fertilizer
• /
• v.44 no.6
• /
• pp.1144-1149
• /
• 2011

The occurrence of Korean pine (Pinus koraiensis) advance growth has been noticed in the deciduous oak forest being adjacent to the mature Korean pine plantation. the korean pine seedlings in the forest were regenerated naturally from harvested and transported Korean pine seeds and cones by rodents, mainly red squirrels. Mongolian oak (Quercus bariabilis), which formed dominant overstory, had close-to-normal distributions of height, diameter and age classes. Korean pine, which dominated the understory, had the reverse J-shaped height, diameter and age distributions that are expected of a shade tolerant species. Growing in the summer shade of the oak, Korean pine seedling had slow, but steady height growth during the past four decades. Total biomass of Korean pine seedling ranged from $2,835-8,541kg\;ha^{-1}$ and biomass allocation of Korean pine seedling was follows : stem (with bark) > foliage > branches > roots. Korean pine seedlings allocated more biomass to foliage and branches compare to planted Korean pine. The smaller root/shoot ratio of Korean pine seedling in the site is to believed to be result of competition for light. Contents of N and K for Korean pine seedling were greatest in foliage follow by branches, stem ad roots, while content of P was greater in the order of foliage > roots > stem > branches.

• Korean Journal of Ecology and Environment
• /
• v.36 no.1 s.102
• /
• pp.21-28
• /
• 2003

Community composition and functional feeding groups of aquatic insects according to stream order were investigated from the Gapyeong Creek, a typical mid-sized Korean stream in Gyeonggi -do, Korea, in April 2000. For field investigations, the main watercourse and three major tributaries of the stream that belong to stream order ll to Vll were divided into reaches (ca. $1{\sim}4$ km in distance). Aquatic insects were sampled from one or two sites each reach (total 30 sites) using a Surber sampler ($50{\times}50$cm, mesh 0.75 mm). As a result of the quantitative samplings(two Surber samplings at riffle and pool/run per site; total $2{\times}30$=60 Surber samplings) and additional qualitative samplings, a total of 164 species of aquatic insects in 103 genera, 54 families, and 8 orders were collected from the stream. Those aquatic insects were composed of Trichoptera (56spp.: 34.1%), Ephemeroptera (43 spp.: 26.2%), Diptera (25spp.: 15.2%), Plecoptera (23 spp.: 14.0%), Coleoptera (6 spp.: 3.7%), Odonata (6 spp.:3.7%), Hemiptera (3 spp.: 1.8%), and Megaloptera (2 spp.: 1.2%); EPT-group (122 spp.:74.4%) or EPT-group plus Diptera (147 spp.: 89.6%) occupied most of the aquatic insect community; relatively larger number of species occurred in the mid-stream reaches (order III-Vl). The quantitative samplings throughout the study sites yielded a total of 26,286 individuals of aquatic insects ($136{\sim}2522$ inds./0.5 $m^2$, mean 906.4inds./0.5 $m^2$) that belongs to Ephemeroptera (11,994 inds.: 45.6%), Diptera (8730 inds.:33.2%), Trichoptera (4123 inds.: 15.7%), Plecoptera (1213 inds.: 4.6%), Coleoptera (204 inds.: 0.8%), Odonata (13 inds.: 0.05%), Megaloptera (5 inds.: 0.02%), and Hemiptera (4inds.: inds.: 0.02%); average number of individuals of aquatic insects increased as the stream order increased: average numbers of individuals of Bllecoptera and Trichoptera decreased and increased, respectively, as the stream order increased. Tolerant species such as Chironomidae spp., Uracanthella rufa and Hydropsychidae spp. were particularly abundant in the down stream reaches (order Vll) . Species diversity indices (H`) and dominance indices (Dl) were relatively higher and lower, respectively, in the mid-stream reaches (order $IV{\sim}VI$). Shredders occupied the smallest partand collector-gatherers were most abundant among the functional feeding groups(FFGs); collector-filterers considerably increased in the down stream reaches (orders Vl and VII); scrappers were relatively evenly distributed throughout the stream reaches: predators were relatively more abundant in the uppermost stream reaches(order ll) . Overall, the characteristics of aquatic insect comminity and FFGs in the Gapyeong Creek are largely similar to those in the normal streams of temperate deciduous forest in the northern hemisphere that is explained by the river confineum concept.

• Journal of The Korean Society of Grassland and Forage Science
• /
• v.6 no.2
• /
• pp.71-77
• /
• 1986

The field experiment was conducted to evaluate the effect of herbicide treatment (Banvel: 100, 200, U-46: 150, 300, Hedonal: 150, 300, Simazin: 100, 200g/10 a) on change in the botanical composition and dry matter productivity of ladino clover (Trifolium repens L.) dominated pasture mixtures. The experiment was laid down as a randomized block design with 4 replications at experimental field of Livestock Experiment Station in Suweon from 1983 to 1985. The results obtained are summarized as follows: 1. Against ladino clover in mixie grass-clover swards Banvel, U-46 and Hedonal gave good control. The percentage of ladino clover under herbicide tratment decreased to about 1-2%(Banvel), 11-18%(U-46) and 22-31%(Hedonal), respectively, while it increased to 71% in untreated pastures. However, in the second year this trend stated to reverse and occurred clover dominance again in U-46 and Hedonal application, while those remained approximately constant until end of the years under Banvel treatment. Simazin is to be not recommended. 2. The best time for herbicide treatment was found to be late summer before autumn sown 20-25 days. When it applied in early summer weed infestigation by Digitaria spp., Echinochloa spp. and other species was a severe problem. 3. Emergence and early development of introduced pastures were less satisfactory, if it oversown immediatley after herbicide treatments due to its phytotoxical damage. Residual chemicals remained about 7-10 days in topsoils. Perennial ryegrass and orchardgrass were slightly less tolerant than the other species. 4. In dry matter, taken as average of three year results, Banvel applied pastures produced the remarkably high yield of 1023 kg/10 a, which is as much as 44% higher than that of untreated plot. Dry matter yields under U-46 and Hedonal treatment were 842 and 811 kg/10 a, respectively. 5. Weender components and net energy concentration were affected by change in the botanical composition. Crude protein and NEL value were slightly higher in clover dominance than those in herbicide treatments. Total yields of net energy lactation, however, were the highest in Banvel application with 5401 MJ and the lowest in untreatment with 3889 MJ-NEL/10 a DM.

• Korean Journal of Environmental Biology
• /
• v.19 no.4
• /
• pp.261-269
• /
• 2001

The purpose of present study was to introduce a multimetric approach, so called the Index of Biological Integrity (IBI) as a tool for evaluations of water environments. We used 11 metric systems for the IBI to evaluate stream conditions, based on the fish community, and modified 5 original metric attributes suggested by Karr (1981). Overall IBI values in Kap Stream averaged 36 (n = 5) and ranged 17${\sim}$49, indicating a 'fair condition' according to the modified criteria of Karr (1981) and U.S. EPA (1993). However, there were distinct differences in the IBI values among 5 study sites. The IBI values at sites 1, 2, and 3 were 49, 45, and 41, which indicated 'good${\sim}$excellent', 'good', and 'fair' condition, respectively, while values at sites 4 and 5 were 17 and 29, which indicated 'very poor' and 'poor', respectively. The minimum IBI at site 4 was probably due to continuous inputs of wastewater from wastewater disposal plants. The condition at site 4 resulted in predominance of tolerant species (50%), omnivore species (50%), and high abnormalies (43%). In the mean time, the IBI value at site 5, located near 5km downstream from the site 4, increased compared to that of site 4, and this seemed to be a result of recovery of water quality as the polluted water goes downward. We believe that present bioassessment methodology of IBI applied in this study may be used as a key tool to set up specific goals for stream restoration plans and dentify recovery levels of lotic ecosystems after restoration activities(i.e., prevention of point-source pollutant input, restoration of physical habitats, construction of riparian vegetation) as well as a biological measure diagnosing current stream conditions.