• Title/Summary/Keyword: Taxonomic position

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The Status of Distribution for Native Freshwater Turtles in Korea, with Remarks on Taxonomic Position

  • Chang, Min-Ho;Song, Jae-Young;Koo, Kyo-Soung
    • Korean Journal of Environmental Biology
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    • v.30 no.2
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    • pp.151-155
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    • 2012
  • Korean freshwater turtles are divided into native turtles, Chinemys reevesii in Geoemydidae, Pelodiscus sinensis in Trionychidae, and imported turtles, Trachemys scripta elegans, T. s. scripta, Pseudemys rubriventris and Ocadia sinensis. In this study, we determined the distribution of Korean freshwater turtles based on a field study and literature study, and considered the taxonomic position of unidentified native turtles. The study was carried out between May 2010 and November 2011 during the day time, and the capturing tool used to collect turtles consisted of net and metal frame. C. reevesii and P. sinensis were found in 16 and 11 places, respectively. C. reevesii, which inhabits the Korean peninsula, is a taxonomically controversial species, but it is presumed that the turtle belongs to Mauremys. Moreover recent taxonomic studies of the soft-shell turtle have shown that the Korean native species is P. maackii, and P. sinensis was imported from abroad and has been in the natural habitats of Korea since 1970s. The exterior shape and skeletal form of P. maackii and P. sinensis are nearly similar. However, the skin color and yellow spots on the shell could be used to distinguish the two species.

Taxonomic Position of Korean Isolates of Rhizoctonia solani Based on RAPD and ITS Sequencing of Ribosomal DNA

  • Jeon, Young-Ah;Kim, Wan-Gyu;Kim, Dae-Ho;Kwon, Soon-Wo;Hong, Seung-Beom
    • The Plant Pathology Journal
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    • v.26 no.1
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    • pp.83-89
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    • 2010
  • Taxonomic position of 46 Korean isolates of Rhizoctonia solani which were classified into nine intraspecific groups by anastomosis and cultural characteristics was analyzed by randomly amplified polymorphic DNA (RAPD) and sequence analyses of the internal transcribed spacer (ITS) regions of ribosomal DNA. All the isolates within each group showed highly similar band patterns in RAPD. The ITS regions of the isolates within the same groups showed a high level of sequence similarity above 96.0% whereas similarities among different groups were below 94.4%. When compared with several reference strains of R. solani from foreign countries, all the Korean isolates were clustered with the foreign isolates belonging to the same groups in the phylogenetic tree. All six Korean strains of AG-4 were identified as HG-1 out of 3 subgroup of AG-4. We discussed taxonomic position of Korean isolates of R. solani and showed that sequence analysis with ITS regions could be a rapid and useful method for identification of intraspecific group of R. solani.

Taxonomic position of Pedicularis hallaisanensis Hurusawa, an endemic plant of Mt. Halla (한라산 고유 한라송이풀의 분류학적 위치)

  • Cho, Won-Bum;Choi, Byoung-Hee
    • Korean Journal of Plant Taxonomy
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    • v.41 no.2
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    • pp.130-137
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    • 2011
  • Pedicularis growing at Mt. Halla of Jeju Island is known as an endemic species of P. hallaisanensis Hurusawa. On the other hand, the plant is morphologically similar to P. amoena, P. spicata, and P. verticillata in gross morphology, so the taxonomic treatment of the taxon remains controversial. To clarify the taxonomic position of the plants, we examined external morphological characters and nuclear ribosomal DNA ITS sequences for P. hallaisanensis and its related species. The plants of Mt. Halla are clearly different from P. amoena and P. verticillata in the morphology of calyx lobes, the length of galea and lower lip, density of glandular hairs on plants, presences of the radical leaves after anthesis and molecular data. However, P. hallaisanensis is not clearly separated from P. spicata distributed in N. E. Asia on external morphological characters and DNA sequences of internal transcribed spacers. In this study, the morphological and molecular data suggested that P. hallaisanensis should be merged into the former species.

Monographic Study of the Endemic Plants in Korea IX. Taxonomy and interspecific relationships of the genus Melandrium (한국 고유식물의 종속지 IX. 장구채속식물의 분류와 종간유연관계)

  • 정영호
    • Journal of Plant Biology
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    • v.31 no.1
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    • pp.51-68
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    • 1988
  • To clarity the species of genus Melandrium (Caryophyllaceae) in Korea, the taxonomic characters were described and interspecific relationships were discussed to the extemal morphology with light and scanning electron microscopy. The position and size of appendages on petal, the shape and venation pattern of leaf, and the external morphology of seed and pollen were approved as the good characters to classify genus Melandrium in Korea. As the result, genus Melandrium in Korea could be arranged as 6 species, 1 variety, 1 forma. M. umbellatum was exclusively distributed in north Korea, and its taxonomic treatment was reserved.

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Taxonomic Position and Affinities of Isopyrum mandshuricum within Korean Isopyroideae (Ranunculaceae) Based on Molecular Data

  • Lee, Nam-Sook;Yeau, Sung-Hee;Kim, Ji-Hyun;Kim, Min-Ju
    • Animal cells and systems
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    • v.3 no.2
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    • pp.133-141
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    • 1999
  • To examine the taxonomic position and affinities of Isopyrum mandshuricum (Ranunculaceae) and related taxa, genetic analysis were carried out on the basis of isozyme patterns and ITS sequences. Molecular data, both isozyme patterns and ITS sequences suggest that I. mandshuricum is closely related to Enemion raddeanum than to Semiaquilegia adoxoides. The estimation of genetic identities by isozyme analysis reveals that I. manshuricum is genetically distant from E. raddeanum. The phylogenetic tree based on molecular data is rather congruent with the phenogram based on quantitative morphological characteristics, but not consistent with one based on qualitative morphological characteristics. Incongruencies between molecular and qualitative morphological data provide clues to re-evaluate several morphological features.

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Phylogenetic Relationship of Ganoderma Species with the Polyporaceae Based on RFLP Analysis of the Nuclear ITS Region

  • Park, Hong Je;Shin, Kee Sun;Lee, Dong Hun;Bae, Kyung Sook
    • Journal of Microbiology
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    • v.34 no.2
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    • pp.117-123
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    • 1996
  • Restriction-polymorphic patterns of nuclear-ITS were examined for the genetic relationships among 12 bisidiomycetous mushrooms to Aphyllophorales and Agaricales. The taxonomic affinity of Ganoderma species with the family Polyporaceae also was examined. With 13 restriction endonucleases, 159 restriction characters were generated form the 12 species examined. UPGMA and neighbor-joining analyses separated the 12 species into two genetically distinct groups that correspond to orders (Agaricales and Aphyllophorales) where each species is included. This result indicates that there is clear genetic demarcation between Agaricales and Aphyllophorales. Dendrograms constructed by several data analyses showed that even though Ganoderma species are somewhat in intermediate taxonomic position between the Polyporaceae and families of the Agaricales, they are genetically more related to the Polyporaceae. These results are consistent with morphological characters observed in those mushrooms. However, it is premature to conclude taxonomic status Ganoderma species in the present study employing small sample size.

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Taxonomic position and genetic differentiation of Korean Astragalus mongholicus Bunge (한국산 황기의 분류학적 위치 및 유전적 분화)

  • Choi, In-Su;Kim, So-Young;Choi, Byoung-Hee
    • Korean Journal of Plant Taxonomy
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    • v.43 no.1
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    • pp.12-21
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    • 2013
  • To clarify the taxonomic position for Astragalus nakaianus and provide correct scientific name for A. mongholicus cultivar in South Korea, we examined external morphological characters and sequence variations from ITS and five cp non-coding DNA regions. Genetic structure was also analyzed for 61 individuals from three populations using nine microsatellite loci. We found no significant difference between the South Korean cultivar and A. mongholicus var. dahuricus when morphology and ITS sequences were considered. Morphologically, A. nakaianus specimens varied somewhat from A. mongholicus var. mongholicus and var. dahuricus in habit, plant height, and lengths of leaf axis and leaflet. Although sequence data from ITS and cp noncoding DNA regions could not distinguished A. nakaianus from A. mongholicus, microsatellite analysis revealed strong structuring between the cultivar and A. nakaianus. Therefore, we conclude that the South Korean A. mongholicus cultivar should be treated as A. mongholicus var. dahuricus and that A. nakaianus should be merged into A. mongholicus as a variety, i.e., A. mongholicus var. nakaianus.

A taxonomic study of the Ophezia(Gentianaceae) in Korea 1. External morphology and distribution (한국산 용담과 쓴풀속(Ophelia) 식물의 분류 1. 외부형태 및 분포)

    • Korean Journal of Plant Resources
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    • v.12 no.4
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    • pp.324-339
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    • 1999
  • Morphological reinvestigation, external characters and discriminant functional analysis(44 qualitative characters) were examined on 6 taxa of Korean Ophelia, including 5 taxa distributed in south Korea, and one taxon considered to be the variation type of Ophelia wilfordi in order to clarify the limit of intersection and interspecies. And to establish the taxonomic position. One taxon distributed in north Korea was included in the description of species by observation of herbarium specimen of the University of Tokyo in Japan. The two sections were successfully distinguished by internal structure of ovary, morphology of nectary, number of corolla lobe and calyx lobe, and species were also distinguished by morphology of cauline leaf, and color and spot of corolla, respectively. The variation type of Ophelia wilfordi was not distinguished with other species except for absent or present of purple spot in corolla lobe. The results of the discriminal functional analysis indicated that characters of corolla were the most important qualitative characters to distinguish the Ophelia taxa, and morphology of seed and seed coat was useful characters to distinguish taxa higher than species. Therefore the difficult problems of identification of species were successfully solved, and the taxonomic position in intrageneric level was clarified on Korean Ophelia.

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