• Title/Summary/Keyword: Taxon

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A Study on the Status of Waterbirds by Taxon and Seasonal Arrival in the South-West Coast Islands

  • Hyun-Young Park;Sun-Jib Kim
    • International Journal of Advanced Culture Technology
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    • v.11 no.1
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    • pp.349-355
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    • 2023
  • This study surveyed the island located in Sinan-gun and Wando-gun four times, once per season from September 2020 to November 2021 in order to understand the distribution of waterbirds on the island of the southwest coast. As a result of the investigation, a total of waterbirds of 7 orders, 12 families of 50 species, and 3,680 individuals were identified. By taxon, the largest number of species were identified as 11 species of waders, and the number of ducks was the largest with 2,035 individuals. In Bigeum-do Island, where forests are distributed less, the proportion of farmland is large, and tidal flats are widely distributed, the largest number of species and individuals of herons and waders were identified. Ducks and gulls have also been identified in large numbers of individuals in Bigeum-do Island. Most of them are forests and farmland, and the largest number of species and individuals of ducks have been identified in Pyeongil-do Island, where the coast is deep. In addition, Nodae-do Island, Sobyeongpung-do, and Daebyeongpung-do Island with monotonous habitats have been identified with fewer species and individuals. As a result, We learned that various types of waterbirds lived in islands with various habitats, and that the preferred habitat was different depending on the characteristics of the taxon group. By season, the largest number of species was identified as 35 in autumn, and the largest number of individuals was identified as 1,681 in winter. Although most of the seasonally identified waterbirds were winter birds, the largest number of species were identified in autumn, and most of the confirmed waterbird migration were identified in the autumn, indicating that waterbirds used the west-south coast islands as an intermediate stopover while traveling.

Phylogenetic Relationships of Coprinoid Taxa and an Agaric-like Gastroid Taxon Based on the Sequences of Internal Transcribed Spacer (ITS) Regions (ITS 영역의 염기서열을 이용한 먹물버섯류 및 주름버섯 유사 복균류와의 계통학적 유연관계)

  • Park, Dong-Suk;Go, Seung-Joo;Ryu, Jin-Chang
    • The Korean Journal of Mycology
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    • v.27 no.6 s.93
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    • pp.406-411
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    • 1999
  • The phylogenetic relationships of black-spored basidioid taxa (mainly coprinoid taxa) and an agaric-like gastroid taxon were studied. The sequences of internal transcribed spacer regions (ITS) partially including 17S, 25S and 5.8S from 14 species (Coprinus comatus, C. atramentarius, C. micaceus, C. cinereus, C. disseminatus, C. rhizophorus, C. radians, C. echinosporus, Psathyrella candolleana, Podaxis pistillaris, Conocybe lactea, Bolbitius demangei, Agaricus balzei, and Stropharia rugosoannulata) were compared. The reciprocal homologies of ITS sequences among these species were in the range of $38.7{\sim}77.2%$. Black-spored taxa were classified into four clusters. Cluster I comprised C. micaceus, C. radians, and C. disseminata. Cluster II is consisted of C. cinereus, C. echinosporus, C. rhizophorus, and C. atramentarius. On the other hand, C. comatus is in cluster III with Agaricus balzei and Podaxis pistillaris even though this species is belonging to the section Coprinus in morphological aspect. Psathyrelloid taxon is included in cluster II. The question of the origin of secotioid (agaric-like) fungi has been taken, though largely on theoritical suggestions as to whether gastroid taxa give rise to agarics with secotioid taxa as intermediates or whether secotioid taxa are evolutionary novelities arising from many distinct groups of agarics. In this relationship, it was shown that secotioid taxon evolved from within agaric species.

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The List of Korean Organisms Registered in the NCBI Nucleotide Database for Environmental DNA Research (환경유전자 연구를 위한 NCBI Nucleotide 데이터베이스에 등록된 국내 생물 목록 현황)

  • Ihn-Sil Kwak;Chang Woo Ji;Won-Seok Kim;Dongsoo Kong
    • Korean Journal of Ecology and Environment
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    • v.55 no.4
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    • pp.352-359
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    • 2022
  • Recently, with the development of genetic technology, interest in environmental DNA (eDNA) to study biodiversity according to molecular biological approaches is increasing. Environmental DNA has many advantages over traditional research methods for biological communities distributed in the environment but highly depends on the established base sequence database. This study conducted a comprehensive analysis of the habitat status and classification at the genus level, which is mainly used in eDNA (12S rRNA, 16S rRNA, 18S rRNA, COI, and CYTB), focusing on Korean registration taxon groups (phytoplankton, zooplankton, macroinvertebrates, and fish). As a result, phytoplankton and zooplankton showed the highest taxa proportion in 18S rRNA, and macroinvertebrates observed the highest ratio in the nucleotide sequence database in COI. In fish, all genes except 18S rRNA showed a high taxon ratio. Based on the Korean registration taxon group, the gene construction of the top 20 genera according to bio density observed that most of the phytoplankton were registered in 18S rRNA, and the most significant number of COI nucleotide sequences were established in macroinvertebrates. In addition, it was confirmed that there is a nucleotide sequence for the top 20 genera in 12S rRNA, 16S rRNA, and CYTB in fish. These results provided comprehensive information on the genes suitable for eDNA research for each taxon group.

Isolation and Numerical Identification of Streptomyces humidus strain S5-55 Antagonistic to Plant Pathogenic Fungi

  • Lim, Song-Won;Kim, Jeong-Dong;Kim, Biom-Seok;Hwang, Byung-Kook
    • The Plant Pathology Journal
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    • v.16 no.4
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    • pp.189-199
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    • 2000
  • To search for the antifungal substances, various actino-mycete isolates were obtained from various soils of Korea using plate dilution method on the humic acid vitamin agar plates. In the screening procedures using a dual culture method, 32 actionomycete isolates were selected, which showed the inhibitory activity against mycelial growth of plant pathogenic fungi Altirnaria mali, Colletotrichum gloeosporides, Fusarium oxysporum f.sp. cucumerinum, Magnaporthe grisea, Phytophthora capsici, and Rhizoctonia solani. Bioassay of the crude extracts from culture filtrates and mycelial mets revealed that 12 antagonistic actionomycetes produced highly active antifungal substances. Actinomycete strain S5-55 which showed the substantial antifungal activity against the tested fungi was selected for production of the antifungal substances. Based on the cytochemical and morphological characteristics, strain S5-55 was identified as a Streptomyces species. The results of the numerical identification using the TAXON program confirmed that Streptomyces strain S5-55 was identical with Streptomyces humidus including in TAXON major cluster 19. The production of antifungal substance was most favorable when S. humidus strain S5-55 was cultivated for 10 dats on soluble starch broth supplemented with $K_2$HPO$_4$. The antifungal substances active against the plant pathogenic fungi P. capsici and M. grisea were partially purified using $\textrm{C}_{18}$ reversed-phase column chromatography.

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Vegetation and Habitat Environment of Sageretia thea in Jeju Island (제주지역 상동나무의 자생지 생육환경 및 식생조사)

  • Song, Sang Churl;Song, Chang Khil;Kim, Ju Sung
    • Korean Journal of Medicinal Crop Science
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    • v.22 no.4
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    • pp.301-305
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    • 2014
  • This study was carried out to investigate the vegetation and habitat environment of Sageretia thea which is distributed in Jeju island, Korea. Sageretia thea were mainly distributed to the west area in Jeju island. Soil pH and EC of Sageretia thea habitat were 5.8 and $0.34dS{\cdot}m^{-1}$. The contents of organic matter, available phosphate, exchangeable potassium, exchangeable sodium, exchangeable magnesium and exchangeable calcium were 15.27%, $13.6mgkg^{-1}$, $0.27cmol_+kg^{-1}$, $1.3cmol_+kg^{-1}$, $1.7cmol_+kg^{-1}$, $4.9cmol_+kg^{-1}$, respectively. Thirty one taxa including 25 families, 31 genus, 27 species and 4 varieties were identified surrounding Sageretia thea habitat. Specific plant species were 1 taxon in III grade, 1 taxon in I grade and 3 taxa in I grade.

Isolation and Numerical Identification of Antibiotic-Producing streptomyces sp. for Methicillin Resistant Strphylococcus aureus (메치실린 내성 포도상구균에 유효한 항생물질을 생산하는 Streptomyces sp. YSK-681의 분리 및 수리 동정)

  • 김중배;이동희;신운섭;고춘명
    • The Korean Journal of Food And Nutrition
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    • v.11 no.3
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    • pp.340-346
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    • 1998
  • The strain YSK-681 has been selected for antibiotic-producing strain against methicillin resistant Staphylococcus aureus(MRSA) form 1,000 strains of actinomycetes which had been isolated from soil. The strain YSK-681 has been identified on the point of morphological, cultural, physiological and chemical characteristics. Forty-one taxonomic unit characters were tested and the data were analysed numerically using the TAXON program. The isolate was classified into the major cluster 29 of Streptomyces and best-matched to Streptomyces lydicus. Therefore, it was concluded that the isolate was identified to be Streptomyces lydicus.

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The taxonomic entity and distribution of Rubus palmatus var. palmatus and R. palmatus var. coptophyllus (Rosaceae) in Korea (단풍딸기및 긴잎단풍딸기의 분류학적 정체성과 한반도 내 분포)

  • Yang, JiYoung;Lee, Woong;Kim, Seung-Chul;Pak, Jae-Hong
    • Korean Journal of Plant Taxonomy
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    • v.45 no.3
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    • pp.221-226
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    • 2015
  • Rubus palmatus Thunb. var. palmatus (Rosaceae) was first discovered in Anmyeon-do and Geoje-do, Korea, and the new Korean name 'Gin-yip-dan-pung-ttal-gi' was given. This taxon can be distinguished from var. coptophyllus by having 3-lobed or rarely undivided leaves. We, for the first time, report the distribution of R. palmatus var. coptophyllus (A. Gray) Kuntze from the island of Geoje-do in Korea and clarified the Korean vernacular name of 'Dan-pung-ttal-gi.' Finally, we designated the lectotype of R. palmatus using C. P. Thunberg's specimen (UPS-THUNB. 12282).