• Title/Summary/Keyword: TRAP1

Search Result 1,170, Processing Time 0.026 seconds

Characterization of an alkaline esterase from an enriched metagenomic library derived from an oil-spill area

  • Baek, Seung Cheol;Jo, Jeong Min;Jeong, Soo-Mi;Lee, Jae Pil;Lee, Hyun Woo;Kim, Jungho;Kim, Hoon
    • Journal of Applied Biological Chemistry
    • /
    • v.62 no.1
    • /
    • pp.73-79
    • /
    • 2019
  • A novel esterase gene (est7S) was cloned from an enriched metagenomic library derived from an oil-spill area. The gene encoded a protein of 505 amino acids, and the molecular mass of the Est7S was estimated to be 54,512 Da with no signal peptide. Est7S showed the highest identity of 40% to an esterase from a sludge metagenome compared to the characterized enzymes with their properties, although it showed 99% identity to a carboxylesterase in the genome sequence of Alcanivorax borkumensis SK2. Est7S had catalytic triad residues, Ser183, Glu312, and His420, and the GESAG motif in most family VII lipolytic enzymes. Est7S was purified from the crude extract of clone SM7 using Sephacryl S-200 HR and HiTrap Q column chromatographies. The purified Est7S was optimally active at $50^{\circ}C$ and pH 10.0. Est7S showed a high specific activity of 366.7 U/mg protein. It preferred short length esters, particularly p-nitrophenyl acetate, efficiently hydrolyzed R- and S-enantiomers of methyl-3-hydroxy-2-methylpropionate, and glyceryl tributyrate. These properties of Est7S may provide potential merits in biotechnological applications such as detergent and paper processing under alkaline conditions.

Hard Ticks as Vectors Tested Negative for Severe Fever with Thrombocytopenia Syndrome in Ganghwa-do, Korea during 2019-2020

  • Jin, Kyoung;Koh, Yeon-Ja;Ahn, Seong Kyu;Cho, Joonghee;Lim, Junghwan;Song, Jaeyong;Lee, Jinyoung;Gong, Young Woo;Kwon, Mun Ju;Kwon, Hyung Wook;Bahk, Young Yil;Kim, Tong-Soo
    • Parasites, Hosts and Diseases
    • /
    • v.59 no.3
    • /
    • pp.281-289
    • /
    • 2021
  • This study aimed to characterize the seasonal abundance of hard ticks that transmit severe fever with thrombocytopenia syndrome virus from April to November 2019 and 2020 on Ganghwa-do, Incheon Metropolitan City, Korea. The ticks were collected at grassland, grave site, copse and mountain road using a collection trap method. The ixodid hard ticks comprising three species (Haemaphysalis longicornis, H. flava, and Ixodes nipponensis) collected were 6,622 in 2019 and 3,811 in 2020. H. longicornis was the most frequent (97.9% in 2019 and 96.0% in 2020), followed by H. flava (2.0% and 3.0% in 2019 and 2020, respectively) and I. nipponensis (less than 0.1%). Our study demonstrated that seasonal patterns of the tick populations examined for two years were totally unsimilar. The hard ticks tested using RT-qPCR were all negative for severe fever with thrombocytopenia syndrome virus.

Study for Tracing Zombie PCS and Botnet Using an Email Spam Trap (이메일 스팸트랩을 이용한 좀비 PC 및 봇넷 추적 방안연구)

  • Jeong, Hyun-Cheol;Kim, Huy-Kang;Lee, Sang-Jin;Oh, Joo-Hyung
    • Journal of the Korea Institute of Information Security & Cryptology
    • /
    • v.21 no.3
    • /
    • pp.101-115
    • /
    • 2011
  • A botnet is a huge network of hacked zombie PCs. Recognizing the fact that the majority of email spam is sent out by botnets, a system that is capable of detecting botnets and zombie PCS will be designed in this study by analyzing email spam. In this study, spam data collected in "an email spam trail system", Korea's national spam collection system, were used for analysis. In this study, we classified the spam groups by the URLs or attached files, and we measured how much the group has the characteristics of botnet and how much the IPs have the characteristics of zombie PC. Through the simulation result in this study, we could extract 16,030 zombie suspected PCs for one hours and it was verified that email spam can provide considerably useful information in tracing zombie PCs.

Development of a Magnetic Bead-Based Method for Specific Detection of Enterococcus faecalis Using C-Terminal Domain of ECP3 Phage Endolysin

  • Yoon-Jung Choi;Shukho Kim;Jungmin Kim
    • Journal of Microbiology and Biotechnology
    • /
    • v.33 no.7
    • /
    • pp.964-972
    • /
    • 2023
  • Bacteriophage endolysins are peptidoglycan hydrolases composed of cell binding domain (CBD) and an enzymatically active domain. A phage endolysin CBD can be used for detecting bacteria owing to its high specificity and sensitivity toward the bacterial cell wall. We aimed to develop a method for detection of Enterococcus faecalis using an endolysin CBD. The gene encoding the CBD of ECP3 phage endolysin was cloned into the Escherichia coli expression vector pET21a. A recombinant protein with a C-terminal 6-His-tag (CBD) was expressed and purified using a His-trap column. CBD was adsorbed onto epoxy magnetic beads (eMBs). The bacterial species specificity and sensitivity of bacterial binding to CBD-eMB complexes were determined using the bacterial colony counting from the magnetic separations after the binding reaction between bacteria and CBD-eMB complexes. E. faecalis could bind to CBD-eMB complexes, but other bacteria (such as Enterococcus faecium, Staphylococcus aureus, Escherichia coli, Acinetobacter baumannii, Streptococcus mutans, and Porphyromonas gingivalis) could not. E. faecalis cells were fixed onto CBD-eMB complexes within 1 h, and >78% of viable E. faecalis cells were recovered. The E. faecalis recovery ratio was not affected by the other bacterial species. The detection limit of the CBD-eMB complex for E. faecalis was >17 CFU/ml. We developed a simple method for the specific detection of E. faecalis using bacteriophage endolysin CBD and MBs. This is the first study to determine that the C-terminal region of ECP3 phage endolysin is a highly specific binding site for E. faecalis among other bacterial species.

A Study on Development of Acoustic Tweezer System Using Standing Waves and Very High Frequency Focused Beams (정상파와 초고주파 집속 빔을 이용한 음향집게시스템의 개발에 관한 연구)

  • Yang, Jeong-Won;Ha, Kang-Lyeol;Kim, Moo-Joon;Lee, Jung-Woo;Shung, K.K.
    • The Journal of the Acoustical Society of Korea
    • /
    • v.27 no.7
    • /
    • pp.357-364
    • /
    • 2008
  • For the purpose of possibility study on development of an acoustic tweezer using standing waves and very high frequency ultrasound focused beams, a system which can manipulate the position of particles in water has been constructed. It can move the particles to near focal point of a focused beam by the radiation force of standing waves, and then the particles would be trapped by the radiating force of the focused beam. The results show that micro sphere particles were trapped well at nodes of the standing waves and their position can be easily manipulated by frequency control. And, even though the radiation force by single focused beam pushes a particle away from the transducer, two focused confronted beams can trap it at near center.

Control Effect of Frankliniella occidentalis Using Eco-friendly Agricultural Materials Package in a Pepper Greenhouse (유기농업자재 패키지를 통한 시설 고추 꽃노랑총채벌레 방제 효과)

  • Hee-A Lee;Young Su Lee
    • Korean journal of applied entomology
    • /
    • v.63 no.1
    • /
    • pp.73-74
    • /
    • 2024
  • To control western flower thrips (Frankliniella occidentalis), a significant pest of peppers, the control effects of eco-friendly agricultural materials were tested when treated alone and in combination. The control effects of yellow sticky roll traps installed on the stem, predatory natural enemy (Hypoaspis miles) inoculated on the stem, and plant extracts (50% custard apple seed oil + 10% cinnamon extract) sprayed on the foliage were 45.3%, 36.6%, and 50.2%, respectively, when treated individually. Meanwhile, when three eco-friendly agricultural materials were comprehensively applied, the control effect was maintained between 62.4% and 80.9% compared to untreated conditions during the pepper harvesting season. These methods can be utilized for the eco-friendly control of western flower thrips in pepper greenhouses.

Effects of Temperature on the Development and Seasonal Occurrence of Chrysopa pallens (Neuroptera: Chrysopidae) (칠성풀잠자리붙이의 발육에 미치는 온도 영향 및 계절적 발생소장)

  • 이건휘;최만영;이승찬;박형만
    • Korean journal of applied entomology
    • /
    • v.39 no.4
    • /
    • pp.245-250
    • /
    • 2000
  • These studies were conducted to investigate the effect of temperature on the development and seasonal occurrence of Chrysopa pallens Ramber, a predator of aphids. Mean developmental periods of C. pallens from egg to adult emergence at four different temperatures of 17, 22, 27, and $30^{\circ}C$ were 39.5, 32.0,25.0, and 19.8 days, respectively. The longevities of adult females of C. pallens at the four temperatures were 84.7, 79.6, 77.7, and 69.8 days, respectively, whereas the total numbers of eggs laid by a female were 973, 1085, 1637, and 1735, respectively. Egg hatchability, rate of adult emergence, and sex ratio of C. pallets were slighty higher with increased temperature with 84.1~95.9%, 67.6~86.3%, and 1:1. Under three humidity conditions of 35, 55 and 75% RH, the mean developmental periods of C. pallets from egg to adult emergence at the $27^{\circ}C$ were 26, 24, and 22.9 days, respectively, while the number of eggs laid by a female were 1042.8, 1526.5, and 1640.0, respectively. Oviposition of C. pallets usually began 5~6 days after the emergence at $27^{\circ}C$. Then females laid ca. 30~40 eggs a day, reaching a peak of 80~90 eggs a day about 22~28 days after the emergence. Population fluctuation of M. persicae and A. gossypii showed the highest peak in late May through the mid-June, and the second peak appeared in early~mid-September. The adult occurrence of C. pallens by the light trap record started from mid-May, and show two peaks, in mid-late July and mid-late September in Chonbuk area.

  • PDF

Pollination Effect and Nesting Behavior of Osmia cornifrons on 'Hongro', Early and 'Fuji', Late-season Apple Cultivars (중생종 '홍로'와 만생종 '후지'사과에서 머리뿔가위벌(Osmia cornifrons)의 영소활동 특성과 화분매개효과)

  • Lee, Kyeong Yong;Lee, Jung Ae;Yoon, Hyung Ju
    • Korean journal of applied entomology
    • /
    • v.60 no.1
    • /
    • pp.123-133
    • /
    • 2021
  • In order to use Osmia cornifrons more effectively in apples, we investigated the pollination effect and nesting activity of O. cornifrons on 'Hongro', the middle-season cultivar, and 'Fuji', the late-season cultivar. There was a significant difference in the nesting activity and pollination effect of O. cornifrons depending on the apple cultivar. The nesting activity, rate of trap nesting, and reproduction in 'Fuji' were 2.5, 1.5, and 3.8 times greater than in 'Hongro', respectively. The pollination effect according to cultivar 'Fuji' was 1.6 times greater than that of 'Hongro' in the central fruit set. In terms of the quality of fruit, the asymmetry index of 'Fuji' was 2.5 times lower than that of 'Hongro', and the number of apple seeds of 'Fuji' was 1.9 times greater than that of 'Hongro'. The main reason for this result was the air temperature. The activity of O. cornifrons was most affected by air temperature (R2 = 0.578). It is expected that the nesting activity and pollination effect are great in 'Fuji' (17.4-24.1℃) when the temperature during the blooming period is higher than that of 'Hongro' (12.5-20.2℃). Our study provides important information on stable apple production for apple cultivators, and can be used as an evidence for changes in flora and insect fauna caused by climate change.

Growth and characterization of GaAs and AlGaAs with MBE growth temperature (MBE 성장온도에 따른 GaAs 및 AlGaAs의 전기광학적 특성)

  • Seung Woong Lee;Hoon Young Cho;Eun Kyu Kim;Suk-Ki Min;Jung Ho Park
    • Journal of the Korean Crystal Growth and Crystal Technology
    • /
    • v.4 no.1
    • /
    • pp.11-20
    • /
    • 1994
  • GaAs and AlGaAs epi-layers were grown on semi-insulating (100) GaAs substrate by molecular beam epitaxy (MBE) and their electrical and optical properties have been investigated by several measurements. In undoped GaAs, the p-type GaAs layers with the good surface morphology were obtained under the growth conditions of the substrate temperatures ranging from 570 to $585^{\circ}C$ and the $As_4$/Ga ratios from 17 to 22. In the samples with the growth rates of the ranges of $0.9~1.1 {\mu}m/h$, the impurity concentrations were in the ranges of $1.5{\times}10^{14}~5.6{\times}10^{14}cm^{-3}$ with the Hall mobilities of $590~410cm^2/V-s$. In the Si-doped GaAs, the n-type GaAs layers with low electro trap, only two hole deep levels were observed with uniform doping profiles (<1%). AlGaAs layers with good surface morphology and crystallinity were grown under an optimum condition of the substrate temperature, $600^{\circ}C $. 8 deep level defects were observed between 0.17~0.85eV in undoped AlGaAs layers.

  • PDF

Studies on the Eco-friendly Management of Whiteflies on Organic Tomatoes with Oleic Acid (토마토 유기농 시설재배에서 올레산을 이용한 친환경적인 가루이류 방제 효과)

  • Lee, Mun-Haeng;Kim, Sung-Eun;Kim, Young-Shik;Lee, Hee-Keyng;Lee, Hwan-Gu;Jee, Hyung-Jin;Kim, Yong-Ki;Shim, Chang-Ki;Kim, Min-Jeong;Hong, Sung-Jun;Lee, Youn-Su
    • Korean Journal of Organic Agriculture
    • /
    • v.21 no.1
    • /
    • pp.95-104
    • /
    • 2013
  • This research was performed to test the effects of oleic acid for the management of greenhouse whiteflies and tobacco whiteflies. Tobacco whiteflies, especially, are the vectors of tomato yellow leaf curl virus on tomato plants. Whiteflies are not only the vectors of various viruses but also the major insect pests that cause direct damages through sucking and induce sooty mold with their sweet dew on tomato plants. There are many eco-friendly management measures including the use of yellow sticky trap and natural enemies such as Eretmocerus eremicus and Amblyseius swirskii. However, these management measures have difficulties to implement in the greenhouse. Therefore, in this research, oleic acid was tested for its effect on the management of whiteflies at various concentrations of 1,000ppm, 2,000ppm, or 4,000ppm. As a result, treatments of 1,000ppm, 2,000ppm and 4,000ppm oleic acid showed the control value of 70%, 76% and 84%, respectively. In another test, treatments of 2,000ppm oleic acid, and control treatment of 1,5000ppm neem oil and 50ppm dinotefuran showed the control value of 82%, 75%, and 75%, respectively. Cost for one application of oleic acid and neem oil for 10a area would be 3,180 Won and 20,150 Won, respectively. As a result, it was assumed that the use of oleic acid would be a appropriate management measure.