• Title/Summary/Keyword: Strain gradient

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Mutagenesis of Sisomicin-producing Strains and Selection Method of High Producers (Sisomicin 생산균의 돌연변이와 고생산 균주의 선별방법)

  • 이상한;안병우;신철수
    • Microbiology and Biotechnology Letters
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    • v.14 no.4
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    • pp.271-277
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    • 1986
  • A sisomicin-producing strain, Micromonospora inyoensis, was treated with various mutagens. The optimal death rates to obtain the high-producers of sisomicin were 90% for ultraviolet light, 99% for nitrosoguanidine, and 99.3% for nitrous acid, respectively. In place of the method of liquid culture, an agar plug method, which is easy and convenient, was used to measure the antibiotic-producing abilities of the strains isolated from mutagen-treated cells. On the other hand, as the selection method of overproducing mutants after mutagenesis, gradient agar plates which included various antibiotics and salts were used. Among the antibiotics and salts tested, gentamicin and kanamycin as antibiotics, and CuCl$_2$ and HgCl$_2$ as salts, were effective to select the high-producers of sisomicin.

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Investigation of the Properties of Sand Tubules, a Biomineralization Product, and their Microbial Community

  • Hu, Weilian;Dai, Dehui
    • Journal of Microbiology and Biotechnology
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    • v.26 no.2
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    • pp.364-372
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    • 2016
  • Sand tubules, made up of sand grains cemented by microbe-induced calcium carbonate precipitation, have been found in China's Ningxia Province. Sand tubules grow like a tree's roots about 40-60 cm below the surface. The properties of sand tubules and their bacterial community were examined. X-Ray diffraction analysis revealed that the sand tubules were associated with crystalline calcite. Scanning electron microscopy showed that the crystalline solid had a lamellar structure and lacked the presence of cells, suggesting that no bacteria acted as nucleation sites, nor that the crystalline solid was formed by the aggregation of bacteria. Denaturing gradient gel electrophoresis analysis showed 11 of the 12 detectable bands were uncultured bacteria by BLAST analysis in the GenBank database, and the rest were closely related to Paenibacillus sp. (100% identity). By cultivation techniques, the only strain isolated from the sand tubule was suggested to be related to Paenibacillus sp.; no archaea were found. Furthermore, Paenibacillus sp. was demonstrated to induce calcium carbonate precipitation in vitro.

Norfloxacin Resistance Mechanism of E. coli 11 and E. coli 101-Clinical Isolates of Escherichia coli in Korea

  • Kim, Kyung-Soon;Lee, Soon-Deuk;Lee, Yeon-Hee
    • Archives of Pharmacal Research
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    • v.19 no.5
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    • pp.353-358
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    • 1996
  • E. coli 11 and E. coli 101, clinical isolates of Escherichia coli were resistant to various quinolones, especially MICs to norfloxacin of both strains were higher than 100 mg/ml. In the presence of carbonyl cyanide m-chlorophenylhydrazone, a proton gradient uncoupler, norfloxacin uptake in both strains was increased, suggesting that an efflux system play an important role in the norfloxacin resistance. Outer membrane proteins of the susceptible and resistant strains which could affect the route of norfloxacin entry into cells were different. When quinolone resistance determining region(QRDR) of gyrA was amplified using PCR and cut with Hinf I, QRDR in the susceptible strain yielded two fragments while QRDRs in E. coli 11 and E. coli 101 yielded only one uncut fragment. When DNA sequence of QRDR was analyzed, there were two mutations as Ser-83 and Asp-87 in both resistant strains. these residues were changed to Leu-83 and Asn-87, respectively. These results showed that the norfloxacin resistance of E. coli 11 and E. coli 101 was resulted from multiple changes-an altered DNA gyrase A subunit, a change in route of drug entry, and reduction in quinolone concentration inside cells due to an efflux system.

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A novel higher order shear deformation theory based on the neutral surface concept of FGM plate under transverse load

  • Daouadji, Tahar Hassaine;Benferhat, Rabia;Adim, Belkacem
    • Advances in materials Research
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    • v.5 no.2
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    • pp.107-120
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    • 2016
  • The static analysis of the simply supported functionally graded plate under transverse load by using a new sinusoidal shear deformation theory based on the neutral surface concept is investigated analytically in the present paper. No transversal shear correction factors are needed because a correct representation of the transversal shearing strain is given. The mechanical properties of the FGM plate are assumed to vary continuously through the thickness according to a power law formulation except Poisson's ratio, which is kept constant. The equilibrium and stability equations are derived by employing the principle of virtual work. Results are provided for thick to thin plates and for different values of the gradient index k, which subjected to sinusoidal or uniformly distributed lateral loads. The accuracy of the present results is verified by comparing it with finite element solution. From the obtained results, it can be concluded that the proposed theory is accurate and efficient in predicting the displacements and stresses of functionally graded plates.

Nonlinear analysis of viscoelastic micro-composite beam with geometrical imperfection using FEM: MSGT electro-magneto-elastic bending, buckling and vibration solutions

  • Alimirzaei, S.;Mohammadimehr, M.;Tounsi, Abdelouahed
    • Structural Engineering and Mechanics
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    • v.71 no.5
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    • pp.485-502
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    • 2019
  • In this research, the nonlinear static, buckling and vibration analysis of viscoelastic micro-composite beam reinforced by various distributions of boron nitrid nanotube (BNNT) with initial geometrical imperfection by modified strain gradient theory (MSGT) using finite element method (FEM) are presented. The various distributions of BNNT are considered as UD, FG-V and FG-X and also, the extended rule of mixture is used to estimate the properties of micro-composite beam. The components of stress are dependent to mechanical, electrical and thermal terms and calculated using piezoelasticity theory. Then, the kinematic equations of micro-composite beam using the displacement fields are obtained. The governing equations of motion are derived using energy method and Hamilton's principle based on MSGT. Then, using FEM, these equations are solved. Finally the effects of different parameters such as initial geometrical imperfection, various distributions of nanotube, damping coefficient, piezoelectric constant, slenderness ratio, Winkler spring constant, Pasternak shear constant, various boundary conditions and three material length scale parameters on the behavior of nonlinear static, buckling and vibration of micro-composite beam are investigated. The results indicate that with an increase in the geometrical imperfection parameter, the stiffness of micro-composite beam increases and thus the non-dimensional nonlinear frequency of the micro structure reduces gradually.

Bending analysis of a micro sandwich skew plate using extended Kantorovich method based on Eshelby-Mori-Tanaka approach

  • Rajabi, Javad;Mohammadimehr, Mehdi
    • Computers and Concrete
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    • v.23 no.5
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    • pp.361-376
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    • 2019
  • In this research, bending analysis of a micro sandwich skew plate with isotropic core and piezoelectric composite face sheets reinforced by carbon nanotube on the elastic foundations are studied. The classical plate theory (CPT) are used to model micro sandwich skew plate and to apply size dependent effects based on modified strain gradient theory. Eshelby-Mori-Tanaka approach is considered for the effective mechanical properties of the nanocomposite face sheets. The governing equations of equilibrium are derived using minimum principle of total potential energy and then solved by extended Kantorovich method (EKM). The effects of width to thickness ratio and length to width of the sandwich plate, core-to-face sheet thickness ratio, the material length scale parameters, volume fraction of CNT, the angle of skew plate, different boundary conditions and types of cores on the deflection of micro sandwich skew plate are investigated. One of the most important results is the reduction of the deflection by increasing the angle of the micro sandwich skew plate and decreasing the deflection by decreasing the thickness of the structural core. The results of this research can be used in modern construction in the form of reinforced slabs or stiffened plates and also used in construction of bridges, the wing of airplane.

Relationship between AdeABC Efflux Pump Genes and Carbapenem in Multidrug-resistant Acinetobacter baumannii

  • Ju, Yeongdon;Kim, Yoo-Jeong;Chang, Chulhun L.;Choi, Go-Eun;Hyun, Kyung-Yae
    • Biomedical Science Letters
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    • v.27 no.2
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    • pp.59-68
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    • 2021
  • Multidrug-resistant strain of Acinetobacter baumannii (MDRAB) is an emerging pathogen in health care facilities, preventing MDRAB is a public health concern. We conducted this experiment on a clinical isolate of A. baumannii with two main goals: the role of the efflux pump system in the stress provision of carbapenem and the response to the transcription level of the efflux pump gene. A total of 34 strains of A. baumannii was isolated from the Yangsan Hospital of Pusan National University. First, when we compared and observed the expression of the efflux pump gene and antibacterial resistance to carbapenem, a strong correlation was observed between carbapenem resistance and overexpression of adeB (P=0.0056). Second, a correlation between the efflux pump and concentration gradient and tolerance to carbapenem stress at the AdeABC efflux pump genes transcription level was confirmed. Our results revealed that the expression of the AdeABC efflux pump is an important resistance determinant in obtaining antibiotic resistance of the carbapenem group in A. baumannii.

Frequency characteristics and sensitivity analysis of a size-dependent laminated nanoshell

  • Dai, Zuocai;Jiang, Zhiyong;Zhang, Liang;Habibi, Mostafa
    • Advances in nano research
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    • v.10 no.2
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    • pp.175-189
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    • 2021
  • In this article, frequency characteristics, and sensitivity analysis of a size-dependent laminated composite cylindrical nanoshell under bi-directional thermal loading using Nonlocal Strain-stress Gradient Theory (NSGT) are presented. The governing equations of the laminated composite cylindrical nanoshell in thermal environment are developed using Hamilton's principle. The thermodynamic equations of the laminated cylindrical nanoshell are obtained using First-order Shear Deformation Theory (FSDT) and Fourier-expansion based Generalized Differential Quadrature element Method (FGDQM) is implemented to solve these equations and obtain natural frequency and critical temperature of the presented model. The novelty of the current study is to consider the effects of bi-directional temperature loading and sensitivity parameter on the critical temperature and frequency characteristics of the laminated composite nanostructure. Apart from semi-numerical solution, a finite element model was presented using the finite element package to simulate the response of the laminated cylindrical shell. The results created from finite element simulation illustrates a close agreement with the semi-numerical method results. Finally, the influences of temperature difference, ply angle, length scale and nonlocal parameters on the critical temperature, sensitivity, and frequency of the laminated composite nanostructure are investigated, in details.

Application of machine learning and deep neural network for wave propagation in lung cancer cell

  • Xing, Lumin;Liu, Wenjian;Li, Xin;Wang, Han;Jiang, Zhiming;Wang, Lingling
    • Advances in nano research
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    • v.13 no.3
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    • pp.297-312
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    • 2022
  • Coughing and breath shortness are common symptoms of nano (small) cell lung cancer. Smoking is main factor in causing such cancers. The cancer cells form on the soft tissues of lung. Deformation behavior and wave vibration of lung affected when cancer cells exist. Therefore, in the current work, phase velocity behavior of the small cell lung cancer as a main part of the body via an exact size-dependent theory is presented. Regarding this problem, displacement fields of small cell lung cancer are obtained using first-order shear deformation theory with five parameters. Besides, the size-dependent small cell lung cancer is modeled via nonlocal stress/strain gradient theory (NSGT). An analytical method is applied for solving the governing equations of the small cell lung cancer structure. The novelty of the current study is the consideration of the five-parameter of displacement for curved panel, and porosity as well as NSGT are employed and solved using the analytical method. For more verification, the outcomes of this reports are compared with the predictions of deep neural network (DNN) with adaptive optimization method. A thorough parametric investigation is conducted on the effect of NSGT parameters, porosity and geometry on the phase velocity behavior of the small cell lung cancer structure.

A hybrid conventional computer simulation via GDQEM and Newmark-beta techniques for dynamic modeling of a rotating micro nth-order system

  • Fan, Linyuan;Zhang, Xu;Zhao, Xiaoyang
    • Advances in nano research
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    • v.12 no.2
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    • pp.167-183
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    • 2022
  • In this paper, the free and forced vibration analysis of rotating cantilever nanoscale cylindrical beams and tubes is investigated under the external dynamic load to examine the nonlocal effect. A couple of nonlocal strain gradient theories with different beams and tubes theories, involving the Euler-Bernoulli, Timoshenko, Reddy beam theory along with the higher-order tube theory, are assumed to the mathematic model of governing equations employing the Hamilton principle in order to derive the nonlocal governing equations related to the local and accurate nonlocal boundary conditions. The two-dimensional functional graded material (2D-FGM), made by the axially functionally graded (AFG) in conjunction with the porosity distribution in the radial direction, is considered material modeling. Finally, the derived Partial Differential Equations (PDE) are solved via a couple of the generalized differential quadrature element methods (GDQEM) with the Newmark-beta techniques for the time-dependent results. It is indicated that the boundary conditions equations play a crucial task in responding to nonlocal effects for the cantilever structures.