• Title/Summary/Keyword: Step-Pool

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Development of a highly effective T-DNA inserted mutant screening method in a Chinese cabbage (Brassica rapa L. spp. pekinensis) reverse genetics system

  • Lee, Gi-Ho;Kang, Yoon-Jee;Yi, Seul-Ki;Lim, Suk-Bin;Park, Young-Doo
    • Plant Biotechnology Reports
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    • v.4 no.3
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    • pp.201-211
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    • 2010
  • We present a highly effective T-DNA inserted gene screening method as part of a reverse genetics model system using the Chinese cabbage (Brassica rapa L. spp. pekinensis). Three-step two-dimensional (2D) matrix strategies are potentially accurate and useful for the identification of specific T-DNA inserted mutants from a large population. To construct our Chinese cabbage model, we utilized a forward genetics screening approach for the abnormal phenotypes that were obtained from transgenic plants of Brassica rapa generated with Agrobacteria tumefaciens containing the pRCV2 vector. From one transgenic plant with an abnormal phenotype, we observed that the st1 gene (which is related to senescence-associated process proteins) contained a T-DNA fragment, and that its expression level was decreased. This T-DNA insert was then used as a control to construct an effective screening pool. As a result, the optimum template concentration was found to be 0.1-1 ng in our PCR strategy. For other conditions, positive changes to the Gibbs free energy prevented the formation of oligo dimers and hairpin loop structures, and autosegment extension gave better results for long fragment amplification. Using this effective reverse genetics screening method, only 23 PCR reactions were necessary to select a target gene from a pool of 100 individual DNAs. Finally, we also confirmed that the sequence we obtained from the above method was identical to the flanking sequence isolated by rescue cloning.

Seismic Sliding Characteristics of Rectangular Structures Submerged in a Rectangular Pool (수조내 사각단면 구조물의 미끄럼 지진응답 특성)

  • 신태명;이희남
    • Journal of KSNVE
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    • v.8 no.2
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    • pp.260-266
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    • 1998
  • According to the conventional method of analysis for the seismic sliding of equipment submerged in a pool, in general, only the initial condition of fluid gap is used to estimate the hydrodynamic effect between the two structures throughout the seismic analysis. This is based on the assumption of small displacement relative to the fluid gap thickness during earthquakes. In a narrow fluid gap condition, however, this method may lead to a result of unconservative side. Through example seismic analyses for equipment submerged in a pool of a building, in this paper, it is studied when and how much the sliding response can be underestimated. And method of updating the hydrodynamic effect in each step of time integration is proposed to avoid excessive error in estimation of peak sliding response in such a case.

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Effect of Product Appearance and Performance on the Consumer's Affection in the Design of Mobile Phones

  • Kim, Sung-Yup;Park, Sung-Joon;Kim, Sung-Min;Jung, Eui-S.
    • Journal of the Ergonomics Society of Korea
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    • v.29 no.4
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    • pp.527-532
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    • 2010
  • Product developers nowadays must consider not only the technological satisfaction of consumers but their affective needs as well. These affective needs are greatly affected by the appearance and performance functions of the product, which are simply called in this study appearance-based affection and performance-based affection. This study examined these two affective factors that must be considered while designing mobile phones. Extracted relationship between the two factors was processed in five steps. The first step includes gathering potential affective expressions that are needed to evaluate the levels of consumer's affection for mobile phone design in the pool of adjectives. In the second step, a simple frequency analysis was done from a consumer survey to extract frequently used affective expression. The third step was to extract primary tasks for mobile phones and to perform an experiment or a survey for the evaluation of mobile phones using those tasks. Representative affective factors were then extracted in the fourth step based on factor analysis. Finally, using ANOVA, the extracted representative affective factors were prioritized to draw a relationship between appearance-based affection and performance-based affection. The result of this study suggests each of appearance-based affections and performance-based affections that should be considered in designing mobile phones.

DNA Light-strand Preferential Recognition of Human Mitochondria Transcription Termination Factor mTERF

  • Nam, Sang-Chul;Kang, Chang-Won
    • BMB Reports
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    • v.38 no.6
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    • pp.690-694
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    • 2005
  • Transcription termination of the human mitochondrial genome requires specific binding to termination factor mTERF. In this study, mTERF was produced in E. coli and purified by two-step chromatography. mTERF-binding DNA sequences were isolated from a pool of randomized sequences by the repeated selection of bound sequences by gel-mobility shift assay and polymerase chain reaction. Sequencing and comparison of the 23 isolated clones revealed a 16-bp consensus sequence of 5'-GTG$\b{TGGC}$AGANCCNGG-3' in the light-strand (underlined residues were absolutely conserved), which nicely matched the genomic 13-bp terminator sequence 5'-$\b{TGGC}$AGAGCCCGG-3'. Moreover, mTERF binding assays of heteroduplex and single-stranded DNAs showed mTERF recognized the light strand in preference to the heavy strand. The preferential binding of mTERF with the light-strand may explain its distinct orientation-dependent termination activity.

Dynamic Neural Units and Genetic Algorithms With Applications to the Control of Unknown Nonlinear Systems (동적 신경망과 Geneo-tic Algorithms를 적용한 비선형 시스템의 제어)

  • Cho, Hyun-Seob;Min, Jin-Kyoung;Roh, Yong-Gi;Jung, Byung-Jo;Jang, Sung-Whan
    • Proceedings of the KIEE Conference
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    • 2006.07d
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    • pp.1943-1944
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    • 2006
  • "Dynamic Neural Unit"(DNU) based upon the topology of a reverberating circuit in a neuronal pool of the central nervous system. In this thesis, we present a genetic DNU-control scheme for unknown nonlinear systems. Our methodis different from those using supervised learning algorithms, such as the backpropagation (BP) algorithm, that needs training information in each step. The contributions of this thesis are the new approach to constructing neural network architecture and its trainin

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Robust control of Nonlinear System Using Multilayer Neural Network (다층 신경회로망을 이용한 비선형 시스템의 견실한 제어)

  • Cho, Hyun-Seob
    • The Journal of Korea Institute of Information, Electronics, and Communication Technology
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    • v.6 no.4
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    • pp.243-248
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    • 2013
  • In this thesis, we have designed the indirect adaptive controller using Dynamic Neural Units(DNU) for unknown nonlinear systems. Proposed indirect adaptive controller using Dynamic Neural Unit based upon the topology of a reverberating circuit in a neuronal pool of the central nervous system. In this thesis, we present a genetic DNU-control scheme for unknown nonlinear systems. Our method is different from those using supervised learning algorithms, such as the backpropagation (BP) algorithm, that needs training information in each step. The contributions of this thesis are the new approach to constructing neural network architecture and its training.

Determination of the process variables for quality monitoring in direct rolling processes (직접압연 공정에서 품질계측을 위한 공정변수의 선정)

  • 배세철;박영준;조형석
    • 제어로봇시스템학회:학술대회논문집
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    • 1996.10b
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    • pp.1364-1367
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    • 1996
  • Recently, direct rolling process, called as strip casting process, has been interested in to save production cost by reducing forming processes. In direct rolling process, since a steel strip of thickness 1-5(mm) can be produced directly from molten metal, it can eliminate secondary hot rolling process. On the other hand, since many process variables are existed in this process and relation of these variables is very complex, it is difficult to realize the process design and the quality control. In this paper, as first step to overcome above difficulties, the quantitative relationship of the process variables affected to quality of the strip has been carried out through the numerical analysis. Also, we determined the process variable to monitor the quality in the direct rolling process. As a result, we show that the solidification final point, called as Nip point, was related directly to quality of the strip.

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Dynamic Neural Units and Genetic Algorithms With Applications to the Control of Unknown Nonlinear Systems (Geneo-tic Algorithms을 이용한 비선형 동적 시스템 제어)

  • Kim, Hee-Sook;Park, Jong-Chun;Lee, Keun-Wang;Cho, Hyeon-Seob
    • Proceedings of the KIEE Conference
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    • 2004.07d
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    • pp.2484-2486
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    • 2004
  • "Dynamic Neural Unit"(DNU) based upon the topology of a reverberating circuit in a neuronal pool of the central nervous system. In this thesis, we present a genetic DNU-control scheme for unknown nonlinear systems. Our method is different from those using supervised learning algorithms. such as the back propagation (BP) algorithm, that needs training information in each step. The contributions of this thesis are the new approach to constructing neural network architecture and its trainin.

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Dynamic Neural Units and Genetic Algorithms With Applications to the Control of Unknown Nonlinear Systems (Dynamic Neural Unit와 GA를 이용한 비선형 동적 시스템 제어)

  • Cho, Hyeon-Seob;Roh, Yong-Gi;Jang, Sung-Whan
    • Proceedings of the KAIS Fall Conference
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    • 2006.05a
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    • pp.311-315
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    • 2006
  • "Dynamic Neural Unit"(DNU) based upon the topology of a reverberating circuit in a neuronal pool of the central nervous system. In this thesis, we present a genetic DNU-control scheme for unknown nonlinear systems. Our methodis different from those using supervised learning algorithms, such as the backpropagation (BP) algorithm, that needs training information in each step. The contributions of this thesis are the new approach to constructing neural network architecture and its trainin

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Dynamic Neural Units and Genetic Algorithms With Applications to the Control of Unknown Nonlinear Systems (미지의 비선형 시스템 제어를 위한 DNU와 GA알고리즘 적용에 관한 연구)

  • XiaoBing, Zhao;Min, Lin;Cho, Hyeon-Seob;Jeon, Jeong-Chay
    • Proceedings of the KIEE Conference
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    • 2002.07d
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    • pp.2486-2489
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    • 2002
  • Pool of the central nervous system. In this thesis, we present a genetic DNU-control scheme for unknown nonlinear systems. Our method is different from those using supervised learning algorithms, such as the backpropagation (BP) algorithm, that needs training information in each step. The contributions of this thesis are the new approach to constructing neural network architecture and its training.

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