• The Plant Pathology Journal
• /
• 제24권2호
• /
• pp.101-111
• /
• 2008

The fungal genus Alternaria is comprised of many saprophytic and endophytic species, but is most well known as containing many notoriously destructive plant pathogens. There are over 4,000 Alternaria/host associations recorded in the USDA Fungal Host Index ranking the genus 10th among nearly 2,000 fungal genera based on the total number of host records. While few Alternaria species appear to have a sexual stage to their life cycles, the majority lack sexuality altogether. Many pathogenic species of Alternaria are prolific toxin producers, which facilitates their necrotrophic lifestyle. Necrotrophs must kill host cells prior to colonization, and thus these toxins are secreted to facilitate host cell death often by triggering genetically programmed apoptotic pathways or by directly causing cell damage resulting in necrosis. While many species of Alternaria produce toxins with rather broad host ranges, a closely-related group of agronomically important Alternaria species produce selective toxins with a very narrow range often to the cultivar level. Genes that code for and direct the biosynthesis of these host-specific toxins for the Alternaria alternata sensu lato lineages are often contained on small, mostly conditionally dispensable, chromosomes. Besides the role of toxins in Alternaria pathogenesis, relatively few genes and/or gene products have been identified that contribute to or are required for pathogenicity. Recently, the completion of the A. brassicicola genome sequencing project has facilitated the examination of a substantial subset of genes for their role in pathogenicity. In this review, we will highlight the role of toxins in Alternaria pathogenesis and the use of A. brassicicola as a model representative for basic virulence studies for the genus as a whole. The current status of these research efforts will be discussed.

• 한국자원식물학회지
• /
• 제24권2호
• /
• pp.214-235
• /
• 2011

본 연구는 소광리 일대의 관속식물상을 밝히고 주요 식물들의 분포를 조사하였다. 2009년 4월부터 2010년 9월까지 총 10회에 결쳐 조사를 수행하였다. 그 결과 관속식물은 89과 253속 367종 3아종 53변종 7품종의 430분류군이 확인되었다. 그 중 산림청 지정 희귀식물은 11분류군, 특산식물은 13분류군이 조사되었다. 또한 식물구계학적 특정식물종은 54분류군, 국외반출 승인대상 식물에는 19분류군이 조사되었다. 한편 귀화식물은 15분류군으로 확인되었으며, 귀화율은 3.4%로 나타났다. 조사된 430분류군의 유용도는 식용이 176분류군(40.9%), 약용 145분류군(33.7%), 목초용 114분류군(26.5%), 관상용 63분류군(14.6%), 목재용 15분류군(3.4%), 섬유용 11분류군(2.5%) 그리고 공업용이 4분류군(0.9%)으로 나타났다.

• 한국환경생태학회지
• /
• 제26권5호
• /
• pp.635-653
• /
• 2012

제주시 지역 18개 오름의 관속식물은 116과 301속 359종 3아종 78변종 및 14품종으로 총 454분류군으로 조사되었다. 조사된 오름은 해발 800m 이내로 상록수림은 분포하지 않고 곰솔림이나 삼나무와 편백 조림지가 많았다. 제주시지역 18개 오름의 고유종은 개족도리풀, 새끼노루귀, 벌깨냉이 등 14종이 확인되었다. 식물구계학적 특정식물은 총 116분류군으로, V등급종은 목련, 한라돌쩌귀, 갯취 등 6종, IV등급종은 섬딸기, 버들쥐똥나무, 청피사초 등 16종, III등급종은 붓순나무, 등수국, 가시복분자딸기 등 37종, II등급종은 참개별꽃, 돌양지꽃, 회목나무 등 6종 그리고 I등급종은 바위고사리, 봉의꼬리, 후박나무 등 51종이 확인되었다. 산림청 희귀종은 개족도리풀, 한라돌쩌귀 및 목련 등 11종이었다. 귀화식물은 애기수영, 서양금혼초, 등심붓꽃 등 31분류군이 확인되었다.

• 한국환경복원기술학회지
• /
• 제11권2호
• /
• pp.66-74
• /
• 2008

In recent years, the view centered conservation for eco-system is getting important rather than development from human oriented perspective. As a result, the concept "Sustainable development", that is seeking harmony between conservation and development, appeared so that we researched distribution and status of vascular plants a site of project in the Bukkyungnam substation. The main findings from the study is as follows. The vascular plants a site of project in the Bukkyungnam substation area was listed 435 taxa; 93 families, 269 genera, 377 species, 1 subspecies, 51 varieties and 6 forms. Specific plant species by floral region were total 25 taxa; Acer palmatum (Planted species), Asperula lasiantha in Class III, Caryopteris incana, Cirsium schantarense in Class II, 21 taxa (Dryopteris erythrosora, Chloranthus japonicus, Salix glandulosa, Alnus hirsuta, Quercus variabilis, Ulmus parvifolia, Clematis patens, Rubus hirsutus, Euphorbia pekinensis, Cayratia japonica, Grewia biloba var. parviflora, Vaccinium oldhami, Microstegium japonicum, Hosta capitata, Polygonatum falcatum, etc.) in Class I. Based on the list of Korean endemic plants, 10 taxa were recorded; Cephalotaxus koreana, Populus tomentiglandulosa (Planted species), Indigofera koreana, Forsythia koreana (Planted species), Paulownia coreana (Planted species), Asperula lasiantha, Weigela subsessilis, Adenophora triphylla var. hirsuta, Carex okamotoi, Lilium amabile and based on the list of the rare plants by the Forest ResearchInstitute, 2 taxa were recorded in the studied areas; Lilium callosum (Preservation priority order; No. 191), Aristolochia contorta (No. 151). The naturalized plants in this site were 13 families, 22 genera, 28 taxa and naturalization rate was 6.4% of all 435 taxa vascular plants.

• 대한수의학회지
• /
• 제55권2호
• /
• pp.105-110
• /
• 2015

A real-time PCR assay using hybridization probe (HybProbe) has been developed to detect Brucella (B.) melitensis strains. The primer and HybProbe sets were designed based on the gap gene of chromosome I with a specific single nucleotide polymorphism of B. melitensis. Specificity of the assay was confirmed by comparison to reference Brucella species and other related strains. In the melting curve analysis, B. melitensis generated a peak at $67^{\circ}C$ unlike those for other Brucella species observed at $61^{\circ}C$. Sensitivity of the assay for B. melitensis ranged from 20 ng to 200 fg of genomic DNA. The ability to identify 94 Mongolian B. melitensis isolates using the real-time PCR assay was identical to that of classical biotyping methods and differential multiplex PCR. These data showed that this new molecular technique is a simple and quick method for detecting B. melitensis, which will be important for the control and prevention of brucellosis.

• The Plant Pathology Journal
• /
• 제24권1호
• /
• pp.17-23
• /
• 2008

A total of 33 isolates of Colletotrichum species obtained from pepper, apple, and strawberry in 2001 and 2002 were identified based on mycological characteristics, responses to fungicides carbendazim and the mixture of carbendazim and diethofencarb, and nucleotide sequence analysis of internal transcribed spacer (ITS) regionMost of the Colletotrichum isolates from pepper could be identified as C. acutatum. The pepper isolates produced grey white mycelia that gradually changed to dark gray. The conidia were variable in size, and almost cylindrical in shape with at least one rounded end. They could grow on PDA amended with carbendazim or with the mixture of carbendazim and diethofencarb at $10{\mu}g/ml$, to which the isolates from apple and strawberry were very sensitive. A part of the ITS regions from the Colletotrichum isolates was amplified with the specific primers designed for C. acutatum (Ca1-1) or C. gloeosporioides (Cg1-3). A primer pair of Ca1-1 and a universal primer (ITS4) amplified a 496-bp DNA fragment from all of the pepper isolates examined and one apple isolate. Taken together, it is conclusive that the Colletotrichum isolates causing the typical lesion of anthracnose on pepper fruits are C. acutatum.

• Journal of Plant Biology
• /
• 제28권3호
• /
• pp.217-224
• /
• 1985

Because Ceramium fastigiatum Harvey (1834) is a later homonym of C. fastigiatum Roth (1806), a quite different plant from the former, it becomes illegitimate and must be rejected under the Article 64 of International Code of Botanical Nomenclature. For this reason, we suggest to give a new name, Ceramium fastigiramosum Boo et Lee, to the former species, keeping the original specific epithet‘fastigiatum’. The morphology of vegetative and reproductive structures is re-examined. The life history is confirmed as a Polysiphonia-type in laboratory culture.

• The Plant Pathology Journal
• /
• 제20권4호
• /
• pp.302-307
• /
• 2004

Three pairs of specific primers were developed for rapid and precise RT-PCR detection of three seed-transmissible viruses, namely Peanut clump virus (PCV, Pecluvirus), White clover mosaic virus (WCIMV, Potexvirus) and Carrot red leaf virus (CaRLV, Luteovirus). Each primer set was found in conserved region through multiple sequence alignment in the DNAMAN. Total nucleic acids extracted from PCV-, WCMV-, and CaRLV-infected seeds and healthy plants were used for RT-PCR detection using each virus-specific primer, Sizes of PCV, WCIMV, and CaRLV PCR products were 617bp (PCV-uni5 and PCV-uni3 primers), 561bp (WCMV-CP5 and WCMV-CP3 primers), and 626bp (CL1-UP and CL2-DN primers); which corresponded to the target sizes. Nucleotides sequences of each amplified cDNA were confirmed which belonged to the original virus. This study suggests that these virus-specific primer sets can specifically amplify viral sequences in infected seeds. Thus, they can be used for specific detection of three viruses (PCV, WCMV and CaRLV) from imported seed samples for plant quarantine service.

• Journal of Plant Biotechnology
• /
• 제49권1호
• /
• pp.30-38
• /
• 2022

Solanum brevicaule는 괴경을 형성하는 감자 야생종 중의 하나로 감자재배에서 문제가 되는 중요한 몇 가지 병에 대해 저항성 보여 감자의 신품종 육성을 위한 재료로 이용될 수 있다. 하지만, 본 연구에서 이용된 S. brevicaule의 EBN이 2인 사실로 인하여 재배종 감자와의 생식에 의한 종자생산에 장벽이 되고 있다. 본 연구에서는 차세대 유전체 기술에 의해 완성된 S. brevicaule의 엽록체 전장 유전체와 다른 7개 Solanum 종의 엽록체 전장 유전체를 비교하여 S. brevicaule를 다른 Solanum 종과 구별할 수 있는 Solanum 종 특이적인 분자마커를 개발하였다. S. brevicaule의 엽록체 전장 유전체의 총길이는 155,531 bp였으며, Blastn을 통해 S. spegazzinii 및 S. kurtzianum과 각각 99.99% 및 99.89%의 유사도를 확인할 수 있었다. 또한, 그 구조와 유전자의 구성이 다른 Solanum 종과 매우 유사하였으며, 계통수 분석에서도 다른 Solanum 종들과 매우 가까운 유연관계를 가지는 것으로 확인되었다. 엽록체 전장 유전체 다중 정렬에서는 총 27개의 S. brevicaule 특이적인 SNP 영역이 확인되었으며, 이들 중 세 개의 SNP 영역을 대상으로 최종적으로 S. brevicaule 특이적인 PCR 기반의 CAPS 분자마커를 개발하였다. 본 연구를 통해 얻은 S. brevicaule의 엽록체 전장 유전체와 S. brevicaule 특이적인 분자마커의 결과는 향후 Solanum 종을 대상으로 한 진화와 S. brevicaule를 이용한 감자품종 육성 연구에 기여를 할 수 있을 것이다.

• 한국환경복원기술학회지
• /
• 제10권1호
• /
• pp.44-56
• /
• 2007

The flora was summarized as 195 taxa; 73 families, 138 genera, 168 species, 23 varieties and 4 forms in Jangsoo-ri windbreak forest and 151 taxa; 63 families, 118 genera, 131 species, 18 varieties and 2 forms in Pyeongsa-ri windbreak forest. Based on the list of the rare plants by the Forest Research Institute, 3 taxa and based on the list of Korean endemic plant 4 taxa were recorded in the studied areas; Puccinellia coreensis (Gramineae), Asarum maculatum (Aristolochiaceae), Prunus yedoensis (Rosaceae), Koelreuteria paniculata (Sapindaceae), Adenophora triphylla var. hirsuta (Campanulaceae). The Specific Plant Species which is categorized by the Ministry of Environment, Korea, was summarized as 23 taxa for the 1 degree of 17 taxa, 3 degree of 5 taxa, 5 degree of 1 taxa in Jangsoo-ri windbreak forest and 22 taxa for the 1 degree of 18 taxa, 3 degree of 3 taxa, 5 degree of 1 taxa in Pyeongsa-ri windbreak forest. From the enlisted the flora surveyed, the naturalized plants were 17 taxa in Jangsoo-ri windbreak forest and 19 taxa in Pyeongsa-ri windbreak forests with the Naturalization rate was 8.7 percent and 12.6 percent, respectively. In Jangsoo-ri windbreak forest, there has been occurred many man-made impair and development without legal institution and control. So, it needs in haste institutional conservation measures and systemic database construction about function and necessity of windbreak forest. In Pyeongsa-ri windbreak forest, recently many people visited here. So, if we make eco-tour place connecting nearby coast and windbreak forest, it will contribute resident's economic profit and opportunity, concerns about windbreak forest, and necessity of conservation measures. Recently, the windbreak forests in Jangsoo-ri and Pyeongsa-ri should be bereaved windbreak forest of function by the human activities.