• Title/Summary/Keyword: Species diversity indices

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Application of Beta Diversity to Analysis the Fish Community Structure in Stream (베타다양성 개념의 적용을 통한 청계천 어류 군집 특성 분석)

  • Kim, Dong-Hwan;Lee, Wan-Ok;Hong, Yang-Ki;Jeon, Hyoung-Joo;Kim, Kyung-Hwan;Kang, Hyejin;Song, Mi-Young
    • Korean Journal of Ecology and Environment
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    • v.52 no.3
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    • pp.274-283
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    • 2019
  • Beta diversity is an efficient means of assessing the spatial variation in community composition among sites. To present fish community variation and LCBD (Local Contribution to Beta Diversity) among sites in stream, 6 sampling sites were selected in Cheonggye stream. Fish communities, environmental and habitat variables were collected at sites from April 2014 to October 2015. We used the total variance of the fish community data table (site-by-species community table) based on different forms, presence-absence, abundance, and Hellinger transformation, to estimate and compare beta diversity and LCBD. Fish community data table transformed by Hellinger distance showed the higher values of beta diversity than presence-absence and abundance data table. A similar patterns of LCBD were observed with presence-absence and Hellinger transformed data table. Low value of beta diversity calculated by community data table with abundance was due to the non-normality of fish assemblage data. Additionally, correlation coefficients were calculated to evaluate the relationships among LCBD, community indices and physicochemical variables. LCBD showed negative correlation coefficients with Shannon diversity. Overall, application of beta diversity analysis is an efficient method of addressing spatial variation of fish communities and ecological uniqueness of the sites in stream.

A Study on the Community Structure of Vegetation Landscape in Naejangsan National(I) (내장산국립공원 식물경관의 군집구조에 관한 연구(I))

  • 이규완;심경구
    • Journal of the Korean Institute of Landscape Architecture
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    • v.21 no.2
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    • pp.50-67
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    • 1993
  • This study analyzed the distribution and structure of the vegetation landscape in Naejangsan National Park. The plant distribution was investigated using a field survey. There were 72 sites sampled using the clumpled sampling method. The data derived from the investigation was analyzed using the quantitative analysis of Bray-Curtis method. The analysis was performed by the classification of TWINSPAN. The ordination of DCA and RA was used for the species composition and successional trends. The results are as follows; 1. Quercus. serrata-Q. variabilis community as 21.76(16.49$\textrm{km}^2$), was the largest community in the actual vegetation of the Naejangsan National Park. The degree of green naturality index 8 area covered 64.8% of the study area and the index 6 area did 16%. 2. Classified by the ordination of DCA and environmental variables, such as the plant community was divided into seven groups according to the altitude and forming groups; Chamaecy Paris. pisifera-P.densiflora community, P.densiflora community, Q.variailis community, T.nuciofera-A.palmatum community. 3. Ther species diversity and evenness indices of C.pisifera-P.densiflora community, P.densiflora community appeared low but C.laxiflora communitywhich was the most stable community in the study area. 4. The similarity indices between Q.variabilis community and Q.serrata-Q.variabilis community were calculated 58.84%, but those between other communities were comparatively low level. 5. The successional trends of DBH class seem to be from C. pisifera-P.densiflora community, P.densiflora community to Quercus species community and from Q.variabilis community, Q.serrata-Q.variabilis community to Carpinus species community. 6. Results suggested that the successional trends in Naejangsan National Park; P.densiflora community\longrightarrowQ.variablilis community, Q.serrata-Q.variabilis community\longrightarrowC.laxiflora community in sequence.

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Benthic Macroinvertebrates and Environmental Characteristics of Madongho Wetland (마동호습지의 저서성 대형무척추동물과 환경특성)

  • Hyeon-Woo Han;Seung-Hyeon Lee;Chun-Sik Yoon;Sung-Jin Hong;Seon-Woo Cheong
    • Journal of Environmental Science International
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    • v.33 no.2
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    • pp.139-160
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    • 2024
  • The community structure of benthic macroinvertebrates in the Madongho Wetland protected area and inflow river located in Goseong-gun, Gyeongsangnam-do, was investigated in 2022 and 2023. We collected and identified 3,582 individuals belonging to 7 classes, 23 orders, 51 families, and 78 species over the 2 years from six sites. Gnorimosphaeroma naktongense was the dominant species with a ratio of 20%, and Caridina denticulata denticulata was the subdominant species with a ratio of 13.32%. Predators and gathering collectors were the most abundant in the functional feeding group, while sprawlers were the most diverse and numerous in the habitual dwelling group. Diversity, richness, dominance, and evenness were calculated as the biological indices. In addition, various biological water quality indices were calculated. Most insects in the inflow rivers belonged to group I in evaluating relative resistance and resilience, showing high colony stability. The results of analyzing the correlation between salinity and substrate particle size with brackish water species showed that Gnorimosphaeroma naktongense and Hediste japonica had a significant positive correlation with salinity, while Assiminea lutea and Neomysis awatschensis had a significant positive correlation with substrate particle size. Additionally, Sinelobus kisui was found to be a new record of Korean Tanaididae in this study.

Community Patterning of Benthic Macroinvertebrates in Slightly and Moderately Polluted Streams in Spring and Summer

  • Kim, Dong-Hwan;Cho, Hyun-Duk;Cho, Woon-Seok;Song, Mi-Yong;Chon, Tae-Soo
    • Korean Journal of Ecology and Environment
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    • v.43 no.4
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    • pp.477-491
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    • 2010
  • Benthic macroinvertebrates were collected two times from 116 sites at the $1^{st}{\sim}4^{th}$ order streams in forest areas in Gyungsang province in late spring and late summer. The sample sites belonged to slightly and moderately polluted states. When communities were classified by the Self-Organizing Map (SOM), the gradient was observed according to degree of pollution. Within clusters of slightly polluted sites, however, seasonality was further observed. Scrapers, gatherer-collectors, and filterer-collectors were abundantly observed in late spring while shredders appeared more in late summer. The number of predator species increased in late summer. Behavior types were mostly clingers in two seasons. Community compositions at the moderately polluted sites were not much differentiated in different seasons. Gatherer-collectors and burrowers were dominantly collected in both seasons.

Fungal Biodiversity in Cardamom Protected Forests and Seima Biodiversity Conservation Area of Cambodia

  • Kim, Nam Kyu;Lee, Jin Heung;Jo, Jong Won;Bunthoeun, Roth;Ngeth, Chea;Lee, Jong Kyu
    • Journal of Forest and Environmental Science
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    • v.32 no.2
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    • pp.158-163
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    • 2016
  • Mushroom surveys and collections were conducted in the western and eastern forest areas in Cambodia, and then fungal biodiversity was analyzed by identifying mushrooms. One thousand and three hundreds eighty three specimens were identified by morphological and genetical characteristics, and were classified into 238 species, 160 genera, 52 families, 15 orders, and 3 phylums. The collected mushrooms were immersed in 70% ethyl alcohol for DNA extraction, and the rest of them were dried in the portable mushroom dryer for 12 hrs. Among these mushrooms, the genera Mycena (8.7%), Ganoderma (5.6%), Microporus (5.3%), Marasmius (4.2%), Marasmiellus (3.0%), Phellinus (2.5%), Trametes (2.5%), Hygrocybe (1.9%) and Pycnoporus (1.5%) were dominant. In the western Cambodia, 1,061 specimens were collected from Koh Kong forests, while 263 specimens were collected from the eastern Cambodia, Seima and Mondulkiri forests. Elevations of surveyed sites were ranged from 0 to 750 m above sea level. The number of species observed in the elevation of 251-500 m was the highest as compared to the other ranges of elevation. Daldinia concentrica, Microporus vernicipes, Microporus xanthopus, Pycnoporus coccineus, Stereum hirsutum, and Stereum ostrea were commonly distributed in all ranges of elevation, while the distribution of Ceratomyxa fruticulosa, Panus fulvus, Schizophyllum, Trametes versicolor, and Tyromyces chioneus were limited under 500 m. One hundred and forty one species including Amauroderma sp., Bjerkandera adusta, Trichaptum abietinum, and Tyromyces chioneus were collected only in Cardamom, while 20 species including Auricularia auricula-judae, Coriolopsis sanguinaria, Rigidoporus microporus, and Xylaria polymorpha were collected only in Seima. Ganoderma sp., Mycena sp., Marasmius sp., Microporus xanthopus, Phellinus sp., and Russula sp. were dominant species in both the western and eastern Cambodia. Species diversity indices in the eastern and western survey sites were 1.83 and 1.77, respectively, while evenness indices were 0.92 and 0.90. The species similarity index between two survey sites was 0.42.

Community Analysis of Superfamily Coreoidea (Hemiptera) in Mt. Kyeryongsan (계룡산 지역 허리노린재상과(노린재목)의 군집분석에 관한 연구)

  • Choi, Kwang-Ryul;Jang, Cheol
    • Korean journal of applied entomology
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    • v.31 no.2
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    • pp.113-121
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    • 1992
  • The study was conducted to investigate the community structure of superfamily Coreoidea (Geocorisae: Hemiptera) in Mt. Kyeryongsan from August, 1989 to August, 1990. The collected coreoid insects were composed of 17 species, 13 genera, and 2 families. Percentages of coreoid insects found in each observed zone were 47.4% (13 species) in the paddy bank, 37.4 % (13 species) in the weedy field and 15.2% (11 species) in the shrubs. Dominant species and Simpson's dominance indices were Riptortus clavatusa and Stictopleurus crassicornis ($\lambda$=0.128) in the paddy field, Cletus schmidti and Homoeocerus dilatatus ($\lambda$=0.141) in the weedy field, Riptortus clavatus and Homoeocerus dilatatus ($\lambda$=0.199) in the shrubs. Seasonal dominant species were Cletus trigon us and Rhopalus maculatus ($\lambda$=0.149) in Spring, Cletus schmidti and Homoeocerus dilatatus ($\lambda$=0.132) in Summer, and Riptortus clavatus and Cletus schmidti ($\lambda$=0. 386) in Autumn. Species diversity indices(H') in the paddy bank, weedy field, and shrubs were 0.931, 0.916, and 0.810, respectively. Eveness indices(J') were 0.836, 0.800, and 0.778, respectively. Community structures were almost similar between the paddy bank and the weedy field.

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Community Analysis of Superfamily Pentatomoidea (Hemiptera) in Mt. Kyeryongsan (계룡산 지역 노린재상과(노린재목)의 군집분석에 관한 연구)

  • 최경렬;최광렬
    • Korean journal of applied entomology
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    • v.31 no.2
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    • pp.89-100
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    • 1992
  • The study was conducted to investigate the community structure of superfamily Pentatomoidea(Geocorisae: Hemiptera) in Mt. Kyeryongsan from August, 1989 to August, 1990. The collected pentatomoid insects were composed of 34 species, 22 genera, and 5 families. Percentages of pentatomoid insects found in each observed zone were 45.4 % (22 species) in the paddy bank, 37.5% (26 species) in the weedy field and 17.0% (20 species) in the shrubs. Dominant species and Simpson's dominance indices were Eurydema rugosa and Carbula putoni ($\lambda$=0.125) in the paddy bank, Carbula putoni and Eurydema rugosa ($\lambda$=0.183) in the weedy field, Gonopsis affinis and Coptosoma biguttulum ($\lambda$=0.099) in the shrubs. Seasonal dom¬inant species were Eurydema rugosa and Dolycoris baccarum ($\lambda$0.207) in Spring, Carbula putoni and Eurydema rugosa ($\lambda$=0.1l5) in Summer, and Carbula putoni and Nezara antennata ($\lambda$=0.141) in Autumn. Species diversity indices(H') in paddy bank, weedy field, and shrubs were 1.034, 1.039, and 1.105, respectively. Evenness indices(J') were 0.770, 0.734, and 0.849, respectively. Community structures were almost similar between the weedy field and the shrubs.

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Investigation of Bacterial Diversity in Membrane Bioreactor and Conventional Activated Sludge Processes from Petroleum Refineries Using Phylogenetic and Statistical Approaches

  • Silva, Cynthia;Jesus, Ederson C.;Torres, Ana P. R.;Sousa, Maira P.;Santiago, Vania M. J.;Oliveira, Valeria M.
    • Journal of Microbiology and Biotechnology
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    • v.20 no.3
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    • pp.447-459
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    • 2010
  • Bacterial diversity of two distinct wastewater treatment systems, conventional activated sludge (CAS) and membrane bioreactor (MBR), of petroleum refineries were investigated through 16S rRNA gene libraries. Sequencing and phylogenetic analysis showed that the bacterial community composition of sludge samples was distinct between the two wastewater treatment systems. MBR clones belonged predominantly to Class Betaproteobacteria, represented mainly by genera Thiobacillus and Thauera, whereas CAS clones were mostly related to Class Alphaproteobacteria, represented by uncultured bacteria related to Order Parvularculales. Richness estimators ACE and Chao revealed that the diversity observed in both libraries at the species level is an underestimate of the total bacterial diversity present in the environment and further sampling would yield an increased observed diversity. Shannon and Simpson diversity indices were different between the libraries and revealed greater bacterial diversity for the MBR library, considering an evolutionary distance of 0.03. LIBSHUFF analyses revealed that MBR and CAS communities were significantly different at the 95% confidence level ($P{\leq}0.05$) for distances $0{\leq}D{\leq}0.20$. This work described, qualitatively and quantitatively, the structure of bacterial communities in industrial-scale MBR and CAS processes of the wastewater treatment system from petroleum refineries and demonstrated clearly differentiated communities responsible for the stable performance of wastewater treatment plants.

Diversity of Planktonic Micro Algae in Saemangeum Water Regions (새만금 수역 부유성 미소조류의 다양성)

  • Yeo, Hwan-Goo
    • Journal of the Korea Academia-Industrial cooperation Society
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    • v.11 no.9
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    • pp.3610-3614
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    • 2010
  • Taxonomic compositions and species diversities of the planktonic micro algae communities were investigated 8 times during the period from May, 2006 to November, 2007 in Saemangeum water regions. Total of 191 taxa were observed; 94 diatoms, 31 chlorophytes, 24 dinoflagellates, 24 cyanophytes, 11 euglenophytes, 3 silicoflagellates, 1 cryptophyte and 3 unidentified microflagellates. During the period of this study, diversity indices of the community were changed spatio-temporally and fluctuated irregularly. It was surmised that artificial factors to the water condition such as open and lock of the dike stressed to the planktonic micro algal groups.

Culturable Fungal Endophytes Isolated from the Roots of Coastal Plants Inhabiting Korean East Coast

  • Kim, Hyun;You, Young-Hyun;Yoon, Hyeokjun;Seo, Yeonggyo;Kim, Ye-Eun;Choo, Yeon-Sik;Lee, In-Jung;Shin, Jae-Ho;Kim, Jong-Guk
    • Mycobiology
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    • v.42 no.2
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    • pp.100-108
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    • 2014
  • Twelve plant species were collected from the east coast of Korea to identify culturable endophytes present in their roots. The fungal internal transcribe spacer (ITS) region (ITS1-5.8SrRNA-ITS2) was used as a DNA barcode for identification of fungi. A total of 194 fungal strains were identified and categorized into 31 genera. The genus Penicillium accounted for the largest number of strains, followed by the genus Aspergillus. Furthermore, using 5 statistical methods, the diversity indices of the fungi were calculated at the genus level. After comprehensive evaluation, the endophytic fungal group from Phragmites australis ranked highest in diversity analyses. Several strains responsible for plant growth and survival (Penicillium citrinum, P. funiculosum, P. janthinellum, P. restrictum, and P. simplicissimum), were also identified. This study provides basic data on the sheds light on the symbiotic relationship between coastal plants and fungi.