• 제목/요약/키워드: Species distribution modeling

검색결과 75건 처리시간 0.031초

전국자연환경조사 자료를 이용한 종분포모형 연구 (A Study on the Species Distribution Modeling using National Ecosystem Survey Data)

  • 김지연;서창완;권혁수;류지은;김명진
    • 환경영향평가
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    • 제21권4호
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    • pp.593-607
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    • 2012
  • The Ministry of Environment have started the 'National Ecosystem Survey' since 1986. It has been carried out nationwide every ten years as the largest survey project in Korea. The second one and the third one produced the GIS-based inventory of species. Three survey methods were different from each other. There were few studies for species distribution using national survey data in Korea. The purposes of this study are to test species distribution models for finding the most suitable modeling methods for the National Ecosystem Survey data and to investigate the modeling results according to survey methods and taxonominal group. Occurrence data of nine species were extracted from the National Ecosystem Survey by taxonomical group (plant, mammal, and bird). Plants are Korean winter hazel (Corylopsis coreana), Iris odaesanensis (Iris odaesanensis), and Berchemia (Berchemia berchemiaefolia). Mammals are Korean Goral (Nemorhaedus goral), Marten (Martes flavigula koreana), and Leopard cat (Felis bengalensis). Birds are Black Woodpecker (Dryocopus martius), Eagle Owl (Bubo Bubo), and Common Buzzard (Buteo buteo). Environmental variables consisted of climate, topography, soil and vegetation structure. Two modeling methods (GAM, Maxent) were tested across nine species, and predictive species maps of target species were produced. The results of this study were as follows. Firstly, Maxent showed similar 5 cross-validated AUC with GAM. Maxent is more useful model to develop than GAM because National Ecosystem Survey data has presence-only data. Therefore, Maxent is more useful species distribution model for National Ecosystem Survey data. Secondly, the modeling results between the second and third survey methods showed sometimes different because of each different surveying methods. Therefore, we need to combine two data for producing a reasonable result. Lastly, modeling result showed different predicted distribution pattern by taxonominal group. These results should be considered if we want to develop a species distribution model using the National Ecosystem Survey and apply it to a nationwide biodiversity research.

Modeling the Spatial Distribution of Black-Necked Cranes in Ladakh Using Maximum Entropy

  • Meenakshi Chauhan;Randeep Singh;Puneet Pandey
    • Proceedings of the National Institute of Ecology of the Republic of Korea
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    • 제4권2호
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    • pp.79-85
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    • 2023
  • The Tibetan Plateau is home to the only alpine crane species, the black-necked crane (Grus nigricollis). Conservation efforts are severely hampered by a lack of knowledge on the spatial distribution and breeding habitats of this species. The ecological niche modeling framework used to predict the spatial distribution of this species, based on the maximum entropy and occurrence record data, allowed us to generate a species-specific spatial distribution map in Ladakh, Trans-Himalaya, India. The model was created by assimilating species occurrence data from 486 geographical sites with 24 topographic and bioclimatic variables. Fourteen variables helped forecast the distribution of black-necked cranes by 96.2%. The area under the curve score for the model training data was high (0.98), indicating the accuracy and predictive performance of the model. Of the total study area, the areas with high and moderate habitat suitability for black-necked cranes were anticipated to be 8,156 km2 and 6,759 km2, respectively. The area with high habitat suitability within the protected areas was 5,335 km2. The spatial distribution predicted using our model showed that the majority of speculated conservation areas bordered the existing protected areas of the Changthang Wildlife Sanctuary. Hence, we believe, that by increasing the current study area, we can account for these gaps in conservation areas, more effectively.

Modeling the Natural Occurrence of Selected Dipterocarp Genera in Sarawak, Borneo

  • Teo, Stephen;Phua, Mui-How
    • Journal of Forest and Environmental Science
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    • 제28권3호
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    • pp.170-178
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    • 2012
  • Dipterocarps or Dipterocarpaceae is a commercially important timber producing and dominant keystone tree family in the rain forests of Borneo. Borneo's landscape is changing at an unprecedented rate in recent years which affects this important biodiversity. This paper attempts to model the natural occurrence (distribution including those areas with natural forests before being converted to other land uses as opposed to current distribution) of dipterocarp species in Sarawak which is important for forest biodiversity conservation and management. Local modeling method of Inverse Distance Weighting was compared with commonly used statistical method (Binary Logistic Regression) to build the best natural distribution models for three genera (12 species) of dipterocarps. Database of species occurrence data and pseudoabsence data were constructed and divided into two halves for model building and validation. For logistic regression modeling, climatic, topographical and edaphic parameters were used. Proxy variables were used to represent the parameters which were highly (p>0.75) correlated to avoid over-fitting. The results show that Inverse Distance Weighting produced the best and consistent prediction with an average accuracy of over 80%. This study demonstrates that local interpolation method can be used for the modeling of natural distribution of dipterocarp species. The Inverse Distance Weighted was proven a better method and the possible reasons are discussed.

Residual spatial autocorrelation in macroecological and biogeographical modeling: a review

  • Gaspard, Guetchine;Kim, Daehyun;Chun, Yongwan
    • Journal of Ecology and Environment
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    • 제43권2호
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    • pp.191-201
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    • 2019
  • Macroecologists and biogeographers continue to predict the distribution of species across space based on the relationship between biotic processes and environmental variables. This approach uses data related to, for example, species abundance or presence/absence, climate, geomorphology, and soils. Researchers have acknowledged in their statistical analyses the importance of accounting for the effects of spatial autocorrelation (SAC), which indicates a degree of dependence between pairs of nearby observations. It has been agreed that residual spatial autocorrelation (rSAC) can have a substantial impact on modeling processes and inferences. However, more attention should be paid to the sources of rSAC and the degree to which rSAC becomes problematic. Here, we review previous studies to identify diverse factors that potentially induce the presence of rSAC in macroecological and biogeographical models. Furthermore, an emphasis is put on the quantification of rSAC by seeking to unveil the magnitude to which the presence of SAC in model residuals becomes detrimental to the modeling process. It turned out that five categories of factors can drive the presence of SAC in model residuals: ecological data and processes, scale and distance, missing variables, sampling design, and assumptions and methodological approaches. Additionally, we noted that more explicit and elaborated discussion of rSAC should be presented in species distribution modeling. Future investigations involving the quantification of rSAC are recommended in order to understand when rSAC can have an adverse effect on the modeling process.

Effectiveness of Sensitivity Analysis for Parameter Selection in CLIMEX Modeling of Metcalfa pruinosa Distribution

  • Byeon, Dae-hyeon;Jung, Sunghoon;Mo, Changyeun;Lee, Wang-Hee
    • Journal of Biosystems Engineering
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    • 제43권4호
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    • pp.410-419
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    • 2018
  • Purpose: CLIMEX, a species distribution modeling tool, includes various types of parameters representing climatic conditions; the estimation of these parameters directly determines the model accuracy. In this study, we investigated the sensitivity of parameters for the climatic suitability calculated by CLIMEX for Metcalfa pruinosa in South Korea. Methods: We first changed 12 parameters and identified the three significant parameters that considerably affected the CLIMEX simulation response. Results: The result indicated that the simulation was highly sensitive to changes in lower optimal temperatures, lower soil moisture thresholds, and cold stress accumulation rate based on the sensitivity index, suggesting that these were the fundamental parameters to be used for fitting the simulation into the actual distribution. Conclusion: Sensitivity analysis is effective for estimating parameter values, and selecting the most important parameters for improving model accuracy.

Modeling Species Distributions to Predict Seasonal Habitat Range of Invasive Fish in the Urban Stream via Environmental DNA

  • Kang, Yujin;Shin, Wonhyeop;Yun, Jiweon;Kim, Yonghwan;Song, Youngkeun
    • Proceedings of the National Institute of Ecology of the Republic of Korea
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    • 제3권1호
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    • pp.54-65
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    • 2022
  • Species distribution models are a useful tool for predicting future distribution and establishing a preemptive response of invasive species. However, few studies considered the possibility of habitat for the aquatic organism and the number of target sites was relatively small compared to the area. Environmental DNA (eDNA) is the emerging tool as the methodology obtaining the bulk of species presence data with high detectability. Thus, this study applied eDNA survey results of Micropterus salmoides and Lepomis macrochirus to species distribution modeling by seasons in the Anyang stream network. Maximum Entropy (MaxEnt) model evaluated that both species extended potential distribution area in October compared to July from 89.1% (12,110,675 m2) to 99.3% (13,625,525 m2) for M. salmoides and 76.6% (10,407,350 m2) to 100% (13,724,225 m2) for L. macrochirus. The prediction value by streams was varied according to species and seasons. Also, models elucidate the significant environmental variables which affect the distribution by seasons and species. Our results identified the potential of eDNA methodology as a way to retrieve species data effectively and use data for building a model.

Predicting the Potential Distribution of an Invasive Species, Solenopsis invicta Buren (Hymenoptera: Formicidae), under Climate Change using Species Distribution Models

  • SUNG, Sunyong;KWON, Yong-Su;LEE, Dong Kun;CHO, Youngho
    • Entomological Research
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    • 제48권6호
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    • pp.505-513
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    • 2018
  • The red imported fire ant is considered one of the most notorious invasive species because of its adverse impact on both humans and ecosystems. Public concern regarding red imported fire ants has been increasing, as they have been found seven times in South Korea. Even if red imported fire ants are not yet colonized in South Korea, a proper quarantine plan is necessary to prevent their widespread distribution. As a basis for quarantine planning, we modeled the potential distribution of the red imported fire ant under current climate conditions using six different species distribution models (SDMs) and then selected the random forest (RF) model for modeling the potential distribution under climate change. We acquired occurrence data from the Global Biodiversity Information Facility (GBIF) and bioclimatic data from WorldClim. We modeled at the global scale to project the potential distribution under the current climate and then applied models at the local scale to project the potential distribution of the red imported fire ant under climate change. Modeled results successfully represent the current distribution of red imported fire ants. The potential distribution area for red imported fire ants increased to include major harbors and airports in South Korea under the climate change scenario (RCP 8.5). Thus, we are able to provide a potential distribution of red imported fire ant that is necessary to establish a proper quarantine plan for their management to minimize adverse impacts of climate change.

Estimating potential range shift of some wild bees in response to climate change scenarios in northwestern regions of Iran

  • Rahimi, Ehsan;Barghjelveh, Shahindokht;Dong, Pinliang
    • Journal of Ecology and Environment
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    • 제45권3호
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    • pp.130-142
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    • 2021
  • Background: Climate change is occurring rapidly around the world, and is predicted to have a large impact on biodiversity. Various studies have shown that climate change can alter the geographical distribution of wild bees. As climate change affects the species distribution and causes range shift, the degree of range shift and the quality of the habitats are becoming more important for securing the species diversity. In addition, those pollinator insects are contributing not only to shaping the natural ecosystem but also to increased crop production. The distributional and habitat quality changes of wild bees are of utmost importance in the climate change era. This study aims to investigate the impact of climate change on distributional and habitat quality changes of five wild bees in northwestern regions of Iran under two representative concentration pathway scenarios (RCP 4.5 and RCP 8.5). We used species distribution models to predict the potential range shift of these species in the year 2070. Result: The effects of climate change on different species are different, and the increase in temperature mainly expands the distribution ranges of wild bees, except for one species that is estimated to have a reduced potential range. Therefore, the increase in temperature would force wild bees to shift to higher latitudes. There was also significant uncertainty in the use of different models and the number of environmental layers employed in the modeling of habitat suitability. Conclusion: The increase in temperature caused the expansion of species distribution and wider areas would be available to the studied species in the future. However, not all of this possible range may include high-quality habitats, and wild bees may limit their niche to suitable habitats. On the other hand, the movement of species to higher latitudes will cause a mismatch between farms and suitable areas for wild bees, and as a result, farmers will face a shortage of pollination from wild bees. We suggest that farmers in these areas be aware of the effects of climate change on agricultural production and consider the use of managed bees in the future.

Core Habitat Zonation for Selected Endangered Species using Remote Sensing and GIS

  • Khant, Aung Pyeh;Tripathi, Nitin K.
    • 대한원격탐사학회:학술대회논문집
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    • 대한원격탐사학회 2003년도 Proceedings of ACRS 2003 ISRS
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    • pp.15-17
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    • 2003
  • One of the most serious problems that the world is facing is the loss of biodiversity and habitats as a result of environmental degradation. There are several strategies to protect the habitats and biodiversity within a certain region such as establishing protected areas; monitoring the remaining forests and managing the landscape within limits have been employed. In this study, Predicted Habitat Distribution Model (simple spatial modeling) was developed using vegetation types, land use and land cover, DEM, slope, drainage, roads, human settlement areas and minimum habitat requirements of each species. Then, based on the checklist of presence and absence of each species, the final habitat maps for selected endangered species are generated. Integration of Remote Sensing (RS) and Geographical Information System (GIS) has proven a very effective tool to generate wildlife habitat maps at various levels. An effecting mapping could be performed based on satellite remote sensing and modeling biodiversity indicators in GIS.

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Numerical Modeling of Circulation and Salinity Distribution in Seomjin River Estuary

  • Made Narayana Adibhusana;Yonguk Ryu;Taehwa Jung
    • 한국수자원학회:학술대회논문집
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    • 한국수자원학회 2023년도 학술발표회
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    • pp.526-526
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    • 2023
  • Water circulation plays a crucial role in regulating the salinity of estuaries, which is essential for the survival of estuarine organisms. Changes in freshwater inflows or sea level can have significant impacts on the distribution and abundance of species within these ecosystems. To better understand these dynamics, this paper presents a study of water circulation and salinity distribution in Seomjin River estuary using the Finite Volume Coastal Ocean Model (FVCOM) numerical model. An extreme scenario was simulated to assess the potential impact of tidal currents and river flow discharge on circulation and salinity distribution. The results of this study have important implications for managing estuarine ecosystems and conserving their associated biodiversity.

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