• Title/Summary/Keyword: Species Comparison

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Mass Transport of Soluble Species Through Backfill into Surrounding Rock (용해도가 큰 핵종의 충전물질에서 주변 암반으로의 이동 현상)

  • Kang, Chul-Hyung;Park, Hun-Hwee
    • Nuclear Engineering and Technology
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    • v.24 no.3
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    • pp.228-235
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    • 1992
  • Some soluble species may not be solubility-limited or congruent-released with the matrix species. For example, during the operation of the nuclear reactor, the fission products can be accumulated in the fuel-cladding gap, voids, and grain boundaries of the fuel rods. In the waste package for spent-fuel placed in a geologic repository, the high solubility species of these fission products accumulated in the“gap”, e.g. cesium or iodine are expected to dissolve rapidly when ground water penetrates fuel rods. The time and space dependent mass transport for high solubility nuclides in the gap is analyzed, and its numerical illustrations are demonstrated. The approximate solution that is valid for all times is developed, and validated by comparison with an asymptotic solution and the solution obtained by the numerical inversion of Laplace transform covering the entire time span.

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Effects of periodic air-exposure and nutrients on the competition of Ascophyllum nodosum and Fucus vesiculosus germlings

  • Park, Seo Kyoung;Choi, Han Gil;Nam, Ki Wan
    • Korean Journal of Environment and Ecology
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    • v.29 no.1
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    • pp.7-13
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    • 2015
  • To examine the relationship between competition and environmental factors, the germlings of Ascophyllum nodosum (L) Le Jolis and Fucus vesiculosus L. were cultured in monocultures and mixtures of the two species under two different exposure and nutrient levels. Both intra- and inter-specific competition were examined in comparison of the mortality and growth of germlings in monocultures and mixtures of the two species. The mortality of germlings increased with increasing density and emergence periods both in the monoculture and mixtures of the two species, and the mortality of Ascophyllum was significantly higher than that of Fucus both in submerged and emerged treatments. The growth of germlings of both species reduced with increasing density but F. vesiculosus always grew faster than Ascophyllum. The values of log output ratio were more than 0.1, indicating that Fucus 'won' in the competitive battles with Ascophyllum under two nutrient- and air-exposure levels. Log output ratio was greater in high than in low nutrients, indicating that the growth of Fucus is more enhanced than that of Ascophyllum in high nutrients. In the present study, the outcome of inter specific competition between germlings of Fucus vesiculosus and Ascophyllum nodosum was slightly altered by duration of emergence and nutrient concentration, but not to such an extent as to change the outcome.

Synonymous Codon Usage Analysis of the Mycobacteriophage Bxz1 and Its Plating Bacteria M. smegmatis: Identification of Highly and Lowly Expressed Genes of Bxz1 and the Possible Function of Its tRNA Species

  • Sahu, Keya;Gupta, Sanjib Kumar;Ghosh, Tapash Chandra;Sau, Subrata
    • BMB Reports
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    • v.37 no.4
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    • pp.487-492
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    • 2004
  • The extent of codon usage in the protein coding genes of the mycobacteriophage, Bxz1, and its plating bacteria, M. smegmatis, were determined, and it was observed that the codons ending with either G and / or C were predominant in both the organisms. Multivariate statistical analysis showed that in both organisms, the genes were separated along the first major explanatory axis according to their expression levels and their genomic GC content at the synonymous third positions of the codons. The second major explanatory axis differentiates the genes according to their genome type. A comparison of the relative synonymous codon usage between 20 highly- and 20 lowly expressed genes from Bxz1 identified 21 codons, which are statistically over represented in the former group of genes. Further analysis found that the Bxz1- specific tRNA species could recognize 13 out of the 21 over represented synonymous codons, which incorporated 13 amino acid residues preferentially into the highly expressed proteins of Bxz1. In contrast, seven amino acid residues were preferentially incorporated into the lowly expressed proteins by 10 other tRNA species of Bxz1. This analysis predicts for the first time that the Bxz1-specific tRNA species modulates the optimal expression of its proteins during development.

Constituents Comparison of Components in Native and Cultivated Species of Angelica tenuissima Nakai (자생종과 재배종 고본의 성분함량 비교)

  • Lee, Hye-Won;Choi, Ji-Hyun;Park, So-Young;Choo, Byung-Kil;Chun, Jin-Mi;Lee, A-Yeong;Kim, Ho-Kyoung
    • Korean Journal of Medicinal Crop Science
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    • v.16 no.3
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    • pp.168-172
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    • 2008
  • The root of Angelica tenuissima Nakai (Umbelliferae) has been used in traditional medicines of Korea as a headache, common cold and a fever remedy. A. tenuissima contains ferulic acid and various compounds of essential oil group such as limonene, 3-butylidenephthalide, ${\gamma}$-terpinene, neocnidilide, ligustilide, senkyunolide and neocnidilide. This study carried out to compare the contents of ferulic acid, z-ligustilide and n-butylidenephthalide between native and cultivated species of A. tenuissima by HPLC. The average contents of ferulic acid, z-ligustilide and n-butylidenephthalide indicated that native species (9 samples) were 0.060%, 0.616%, 0.025% and cultivated species (15 samples) were 0.037%, 0.141%, 0.029%, respectively. All samples were collected from different places in Korea.

The complete chloroplast genome of Diarthron linifolium (Thymelaeaceae), a species found on a limestone outcrop in eastern Asia

  • KIM, Sang-Tae;OH, Sang-Hun;PARK, Jongsun
    • Korean Journal of Plant Taxonomy
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    • v.51 no.4
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    • pp.345-352
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    • 2021
  • Diarthron linifolium Turcz. is an annual herb usually found in sandy soil or limestone areas. Plants in the genus Diarthron are known to have toxic chemicals that may, however, be potentially useful as an anticancer treatment. Diarthron linifolium is a unique species among the species of the genus distributed in Korea. Here, we determine the genetic variation of D. linifolium collected in Korea with a full chloroplast genome and investigate its evolutionary status by means of a phylogenetic analysis. The chloroplast genome of Korean D. linifolium has a total length of 172,644 bp with four subregions; 86,158 bp of large single copy and 2,858 bp of small single copy (SSC) regions are separated by 41,814 bp of inverted repeat (IR) regions. We found that the SSC region of D. linifolium is considerably short but that IRs are relatively long in comparison with other chloroplast genomes. Various simple sequence repeats were identified, and our nucleotide diversity analysis suggested potential marker regions near ndhF. The phylogenetic analysis indicated that D. linifolium from Korea is a sister to the group of Daphne species.

Comparison of Materials for Collection of Adhesive Microalgae in Marine Ecosystems (해양 생태계 부착 미세조류 채집을 위한 소재 비교 연구)

  • Jaeyeong Park;Jang-Seu Ki
    • Ocean and Polar Research
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    • v.45 no.1
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    • pp.1-9
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    • 2023
  • Marine microalgae have different collection methods depending on their habitat. In the case of adhesive microalgae, it is difficult to separate organisms from the substrate surface, and contamination is likely to occur during the sampling process. In this study, we analyzed the collection efficiency of adhesive microalgae using three artificial fiber materials (nylon, blend fabric, and viscose rayon). Each fiber showed different fiber diameter and pore characteristics (nylon 26.09 ㎛, blend fabric 56.6 ㎛, viscose rayon 101.3 ㎛). In addition, attached organisms were collected on the surface of artificial substrates at Bukseong Port in Incheon using each tested fiber material. After that, we investigated the population and species composition. The highest number of cells was found in nylon, which was 8 times higher than in the least collected viscose rayon material. In addition, we identified 24 microalgal species from the substrate, demonstrating that the species composition differed from that of surface water. The number of collected microalgae species varied depending on the fiber materials, with nylon containing all the adhesive microalgae. In contrast, only a few microalgae were observed in other fibers. These results suggest that, of the tested fibers, nylon material may be suitable for collecting adhesive microalgae. As a result, this study may be useful for future research on adhesive microalgae.

Comparison of Three Antibiotic Susceptibility Tests for Viridans Group Streptococci

  • Kim, Yeon-Hee;Lee, Si-Young
    • International Journal of Oral Biology
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    • v.36 no.4
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    • pp.163-166
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    • 2011
  • Oral viridans streptococci are recognized as one of the etiological agents of a variety of infectious diseases such as dental caries and infective endocarditis. Although antimicrobial susceptibility tests for these fastidious bacterial species are now established and standardized, a comparison between the broth microdilution and broth macrodilution tests has not previously been performed. This comparison was performed in the present study using the tests adopted by the Clinical and Laboratory Standards Institute (CLSI) and seven clinical isolates of oral viridans streptococcal strains. A modified broth macrodilution susceptibility test method was also included in this analysis, in which the media was not supplemented with horse blood. The susceptibility interpretation category agreements were measured at 83% (broth microdilution versus broth macrodilution) and 71% (broth microdilution versus modified broth macrodilution). The interpretation category agreement between the broth macrodilution and modified broth macrodilution tests was also 83%. These data indicate that the interpretation of antibiotic susceptibility test results for oral viridans streptococci are influenced by the methods used.

Feasibility of Environmental DNA Metabarcoding for Invasive Species Detection According to Taxa (분류군별 외래생물 탐지를 위한 환경 DNA 메타바코딩 활용 가능성)

  • Yujin Kang;Jeongeun Jeon;Seungwoo Han;Suyeon Won;Youngkeun Song
    • Journal of Environmental Impact Assessment
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    • v.32 no.2
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    • pp.94-111
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    • 2023
  • In order to establish an effective management strategy for invasive species early detection and regular monitoring are required to assess their introduction or dispersal. Environmental DNA (eDNA) is actively applied to evaluate the fauna including the presence of invasive species as it has high detection sensitivity and can detect multiple species simultaneously. In Korea, the applicability evaluation of metabarcoding is being conducted mainly on fish, and research on other taxa is insufficient. Therefore, this study identified the feasibility of detecting invasive species in Korea using eDNA metabarcoding. In addition, to confirm the possibility of detection by taxa, the detection of target species was evaluated using four universal primers (MiFish, MiMammal, Mibird, Amp16S) designed for fish, mammals, birds, and amphibians. As a result, target species (Trachemys scripta, 3 sites; Cervus nippon, 3 sites; Micropterus salmoides, 7 sites; Rana catesbeiana, 4 sites) were detected in 17 of the total 55 sites. Even in the selection of dense sampling sites within the study area, there was a difference in the detection result by reflecting the ecological characteristics of the target species. A comparison of community structures (species richness, abundance and diversity) based on the presence of invasive species focused on M.salmoides and T.scripta, showed higher diversity at the point where invasive species were detected. Also, 1 to 4 more species were detected and abundance was also up to 1.7 times higher. The results of invasive species detection through metabarcoding and the comparison of community structures indicate that the accumulation of large amounts of monitoring data through eDNA can be efficiently utilized for multidimensional ecosystem evaluation. In addition, it suggested that eDNA can be used as major data for evaluation and prediction, such as tracking biological changes caused by artificial and natural factors and environmental impact assessment.

Calculation and Applicability of Rotifers Biomass (Polyarthra spp.) based on Length-Weight Relationship and Spatial Distribution of Body Length (윤충류 생체량 계산과 적용에 관한 고찰 및 제언: Polyarthra의 체장 분포를 이용한 길이-무게 관계식 및 생체량 비교 분석)

  • Oh, Hye-Ji;Seo, Dong-Hwan;Choi, Moonjung;Jeong, Hyun-Gi;Kim, Hyun-Woo;Oh, Jong Min;Chang, Kwang-Hyeon
    • Korean Journal of Ecology and Environment
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    • v.51 no.3
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    • pp.205-211
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    • 2018
  • In this study, we estimated the applicability of length-weight relationship-based biomass calculations by comparison of body length of genus Polyarthra collected from different habitats. Through the comparison, we also tested availability of representative species-specific biomass value of Polyarthra which is often used without length measurement. Polyarthra samples were collected from rivers (Han River and Nakdong River) and reservoir (Paldang Reservoir), and the body length was measured for statistical comparison among habitats and biomass calculations using different equations suggested previously. According to the results, the body length of Polyarthra spp. was significantly different among sampling sites, and the necessity of body length measurement for rotifer species in each situation has been suggested rather than using the representative biomass values which is fixed without considering time and space. Comparison of suggested biomass calculations based on our measured Polyarthra body length, the equation suggested by McCauley showed more reasonable range of biomass values than that suggested by EPA. In addition, in order to calculate more accurate biomass, it is necessary to measure the body length of rotifers, at least more than 44 individuals to reduce error probability to less than 5% with 99% probability. However, since direct measurement of rotifers biomass is limited, it is considered that further analyses are required for more precise application of rotifer biomass of which has high variability due to complex morphologies and species-specific cyclomorphosis often induced by biotic and abiotic factors in the habitats.

Comparison of Weed Characteristics and Possibility of Gene Flow in GM Rice (GM 벼의 유전자이동 가능성 및 잡초 특성비교)

  • Lee, Hyun-Suk;Yi, Gi-Hwan;Kim, Kyung-Min
    • Korean Journal of Weed Science
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    • v.32 no.1
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    • pp.10-16
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    • 2012
  • This study was carried out to investigate the agronomic traits, comparison of weed characteristics and possibility of gene flow in 'vitamin A enforced GM rice' and the donor plant, 'Nagdong'. The GM rice was not significantly different agronomic traits compared to the donor plant, Nagdong. Weed population changes were investigated in the cultivation of the GM rice and the donor plant, Nagdong. Dominant weed species and their dry matter did not show the difference between GM rice and the donor plant, Nagdong in macro-GM crop field. Dominant weed species with the GM rice and the donor plant, Nagdong were Monochoria vaginalis, followed by Eleocharis kuroguwai, Echinochloa crus-galli and Lindernia procumbens. The detection of gene from the GM rice was done using PCR, gene flow can't be detected by weed species. Results of this study on the agronomic traits, weed characteristics and possibility of gene flow has elucidated that GM rice might not be different from the donor plant, Nagdong.