• Title/Summary/Keyword: Soil microorganism

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Effects of Short-Term Soil Tillage Management on Activity and Community Structure of Denitrifiers under Double-Cropping Rice Field

  • Tang, Haiming;Li, Chao;Cheng, Kaikai;Shi, Lihong;Wen, Li;Xiao, Xiaoping;Xu, Yilan;Li, Weiyan;Wang, Ke
    • Journal of Microbiology and Biotechnology
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    • v.30 no.11
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    • pp.1688-1696
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    • 2020
  • Soil physical and chemical characteristics, soil potential denitrification rates (PDR), community composition and nirK-, nirS- and nosZ-encoding denitrifiers were studied by using MiSeq sequencing, quantitative polymerase chain reaction (qPCR), and terminal restriction fragment polymorphism (T-RFLP) technologies base on short-term (5-year) tillage field experiment. The experiment included four tillage treatments: conventional tillage with crop residue incorporation (CT), rotary tillage with crop residue incorporation (RT), no-tillage with crop residue retention (NT), and rotary tillage with crop residue removed as control (RTO). The results indicated that soil organic carbon, total nitrogen and NH4+-N contents were increased with CT, RT and NT treatments. Compared with RTO treatment, the copies number of nirK, nirS and nosZ in paddy soil with CT, RT and NT treatments were significantly increased. The principal coordinate analysis indicated that tillage management and crop residue returning management were the most and the second important factors for the change of denitrifying bacteria community, respectively. Meanwhile, this study indicated that activity and community composition of denitrifiers with CT, RT and NT treatments were increased, compared with RTO treatment. This result showed that nirK, nirS and nosZ-type denitrifiers communities in crop residue applied soil had higher species diversity compared with crop residue removed soil, and denitrifying bacteria community composition were dominated by Gammaproteobacteria, Deltaproteobacteria, and Betaproteobacteria. Therefore, it is a beneficial practice to increase soil PDR level, abundance and community composition of nitrogen-functional soil microorganism by combined application of tillage with crop residue management.

Microbial Reduction of Iron(III) Oxides: Implication for Permeable Reactive Barriers. (철환원 미생물을 이용한 3가 철의 환원에 관한 연구)

  • 임현정;박재우
    • Proceedings of the Korean Society of Soil and Groundwater Environment Conference
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    • 2002.04a
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    • pp.250-253
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    • 2002
  • Remediation of groundwater using zero valent iron filings has received considerable attention in recent years. However, zero valent iron is gradually transformed to iron(III) oxides at permeable reactive barriers, so the reduction of iron(III) oxides can enhance the longevity of the reactive barriers. In this study, microbial reduction of Fe(III) was performed in anaerobic condition. A medium contained nutrients similar to soil solution. The medium was autoclaved and deoxygenated by purging with 99.99% $N_2$ and pH was buffered to 6, while the temperature was regulated as 2$0^{\circ}C$. Activity of iron reducing bacteria were not affected by chlorinated organics but affected by iron(III) oxide. Although perchloroethylene(PCE) was not degraded with only ferric oxide, PCE was reduced to around 50% with ferric oxide and microorganism. It shows that reduced iron can dechlorinate PCE.

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고정화된 Pantoea aggromerans에 의한 토양에서의 가용성 인산의 생성

  • Im, Won-Bong;Jeong, Gwi-Taek;Park, No-Dong;Yun, Jeong-Han;Kim, Si-Uk;Park, Don-Hui
    • 한국생물공학회:학술대회논문집
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    • 2002.04a
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    • pp.403-406
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    • 2002
  • This experimental shows the possibility of using as biofertilizer, which convert insoluble inorganic phosphate salts to plant-usable phosphate type by immobilized microorganism with calcium alginate. In the case of culture of P. agglomerans on constant medium pH, phosphate was produced 357 mg/L after 18hrs. And in the case of culture of immobilzed P. agglomerans bead, phosphate was produced maximum 295.6 mg/L after 120 hrs. Also as using rock phosphate as insoluble phosphate salts, phosphate was respectably produced 190.3 and 195.2 mg/L after 36 hrs at free cells and immobilized cells. In our experiments, the using soils contained 23.16 g-P/kg-soil total phosphate and 3.76 g-P/kg-soil soluble phosphate. The result of 1g immobilized bead seeding, soluble phosphate was produced maximum 6.14 g-P/kg-soil phosphate and this value was increased continuously.

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First Report of Mortierella alpina (Mortierellaceae, Zygomycota) Isolated from Crop Field Soil in Korea

  • Yadav, Dil Raj;Kim, Sang Woo;Babu, Anam Giridhar;Adhikari, Mahesh;Kim, Changmu;Lee, Hyang Burm;Lee, Youn Su
    • Mycobiology
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    • v.42 no.4
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    • pp.401-404
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    • 2014
  • A new recorded species of Mortierella was recovered during the investigation of fungal communities in soil samples collected from different locations of Gangwon-do, Korea. The species was identified and described as Mortierella alpina on the basis of phylogenetic analysis of internal transcribed spacer sequences and morphological characteristics. This species has not been officially reported from Korea thus far.

Effect of Microbial Product on Microorganisms in Soil and Growth of Chinese Cabbage (미생물제제 처리가 토양 미생물상의 변화 및 배추의 생육에 미치는 영향)

  • Seok, Woon-Young;Oh, Ju-Sung;Kim, Doh-Hoon;Chung, Won-Bok;Jeong, Soon-Jae
    • Korean Journal of Organic Agriculture
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    • v.12 no.4
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    • pp.399-409
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    • 2004
  • This study was conducted to investigate the effect of different concentrations of microbial products on growth of chinese cabbage and microorganisms in soil. Two different levels of microbial products, such as 50 times and 100 times diluted solutions of chitosan, wood vinegar and EM activity liquid, were treated for foliar application. the results were summarized as follows : Among foliar applications of microbial products, 100 times diluted solution of chitosan was effective on growth of chinese cabbage comparing to other levels of dilutions and untreated control plot. The number of microorganism in the soil tended to increase under the treatment of microbial products compared to control plot. Especially, the numbers of the bacteria and actinomycetes were estimated $73.67{\times}10^3$ CFU/g and $34.00{\times}10^3$ CFU/g, respectively, under the treatment of 100 times diluted solution of chitosan.

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Estimation of Nitrogen Mineralization of Organic Amendments Affected by Nitrogen Content in Upland Soil Conditions (밭토양 조건에서 질소함량별 유기자원의 질소 무기화율 추정)

  • Lim, Jin-Soo;Lee, Bang-Hyun;Kang, Seung-Hee
    • Korean Journal of Environmental Agriculture
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    • v.38 no.4
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    • pp.262-268
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    • 2019
  • BACKGROUND: To investigate mineralization characteristics of organic resources in the soil, five materials (rice straw, cow manure sawdust compost, microorganism compost, mixed oil-cake, and amino acid fertilizer) were treated according to the nitrogen content, and an indoor incubation experiment was conducted for 128 days. The results of this analysis were applied to determine the nitrogen mineralization pattern of these organic resources. METHODS AND RESULTS: During the constant temperature incubation period, the nitrogen net mineralization rate of the organic resources was the highest in the amino acid fertilizer with the highest nitrogen content, and the lowest in the rice straw with the lowest nitrogen content. A positive correlation (0.96) was observed between the potential nitrogen mineralization rate and total nitrogen content. The mineralization rate constant, k, was negatively correlated with the organic matter (-0.96) and carbon content (-0.97). The nitrogen mineralization rate during the first cropping season, as estimated by the model, was 6.6%, 11.6%, 30.9%, 70.7%, and 81.0% for the rice straw, the cow manure sawdust compost, the microorganism compost, the mixed oil-cake, and the amino acid fertilizer, respectively. CONCLUSION: The nitrogen mineralization rate varies depending on the type of organic resources or the nitrogen content; thus, it can be used as an index for determining the nitrogen supply characteristics of the organic resource. Organic resources such as compost with low nitrogen content or those undergoing fermentation contain organic nitrogen. Organic nitrogen is stabilized during the composting process. Therefore, as the nitrogen mineralization rate of these resources is lower than that of non-fermented organic resources, it is desirable to use the fermented organic materials only to improve soil physical properties rather than to supply nutrients for the required amount of fertilizer.

A Review on Identification Methods for TCE Contamination Sources using Stable Isotope Compositions (안정동위원소 조성을 이용한 TCE 오염원 규명방법 소개)

  • Park, Youngyun;Lee, Jin-Yong;Na, Won Jong;Kim, Rak-Hyeon;Choi, Pil Sung;Jun, Seong-Chun
    • Journal of Soil and Groundwater Environment
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    • v.18 no.3
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    • pp.1-10
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    • 2013
  • This study was performed to summarize application of ${\delta}^{13}C$, ${\delta}^{37}Cl$ and ${\delta}D$ of trichloroethylene (TCE) to studies on environmental forensic field regarding identification of TCE sources and evaluation of contribution of TCE to groundwater using data collected from literatures. ${\delta}^{13}C$, ${\delta}^{37}Cl$ and ${\delta}D$ of TCE give some information regarding sources of TCE because they show specific value according to manufacturing method. Also, TCE do not show a significant isotopic fractionation owing to adsorption and dilution. The isotopic fractionation mainly occurs by biodegradation. In addition, isotopic fractionation factor for TCE is different according to a kind of microorganism participated in biodegradation. However, the isotopic data of TCE have to be applied with chemical compositions of TCE and other hydrogeologic factors because isotopic fractionation of TCE is influenced by various factors.

Implementation of Polyacrylamide in the Agricultural Environment and its Recent Review

  • Choi, Yonghun;Kim, Minyoung;Kim, Youngjin;Jeon, Jonggil;Seo, Myungchul
    • Korean Journal of Soil Science and Fertilizer
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    • v.49 no.5
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    • pp.440-448
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    • 2016
  • Nonpoint sources of pollution (NPS) is defined as diffuse discharges of pollutants (e.g., nutrient, pesticide, sediment, and enteric microorganism) throughout the natural environment and they are associated with a variety of farming practices. Previous studies found that water soluble anionic polyacrylamide (PAM) is one of the highly effective measures for enhancing infiltration, reducing runoff, preventing erosion, controlling nonpoint source of pollutants, and eventually protecting soil and water environment. Potential benefits of PAM treatment in agricultural soil and water environments have been revealed by many research and they include low cost, easy and quick application, and suitability for use with other Best Management Practices (BMPs) for NPS control. This study reviews the various applications of PAM and discusses its further potentials in agricultural environment.

Processing and Fermentation of Food Wastes with MS Microorganism Complex for Swine Feeds (MS 미생물복합군에 의한 음식폐기물의 양돈사료화를 위한 적정처리공정)

  • Lee, Jeong-Chae;Jung, Woo-Jin;Lim, Kye-Taek;Kim, Tae-Hwan
    • Korean Journal of Environmental Agriculture
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    • v.19 no.4
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    • pp.270-275
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    • 2000
  • In order to investigate the proper processing of food wastes with miraculous soil-microorganisms (MS) for final use of swine feeds, calory, amino acid and fatty acid in food wastes were determined in relation with fermentation process with MS microorganism complex. Aflatoxin test was also performed to check safety of the fermented food wastes. Calory of food wastes was determined in average $7.60\;Kcal{\cdot}g^{-1}\;D.W.$ In finally processed food wastes, total content of amino acid was $93.0\;mg{\cdot}g^{-1}]\;D.W$, showing 18.5% of increase by the anaerobic fermentation. Essential and non-essential amino acids were measured at respectively 34.43 and $58.56\;mg{\cdot}g^{-1}\;D.W.$ Leucine, phenylalanine, isoleucine and threonine of essential amino acids and proline and glutamic acid of non-essential amino acids were highly composed as compared to others. The composition of fatty acid in food wastes was also increased by anaerobic fermentation for 3 weeks. Palmitic acid, oleic acid and palmitoleic acid were more important in quantity. Present results indicate that food wastes properly processed with MS have enough calory and are safe from aflatoxin, and that anaerobic fermentation with MS microorganism in an efficient process for hydrolyzing protein and lipids in food wastes.

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Biodiversity of Invertebrate on Organic and Conventional Pear Orchards (유기와 관행재배 배 과수원의 무척추동물의 종 다양성 연구)

  • Kim, Do-Ik;Kim, Seon-Gon;Ko, Sug-Ju;Kang, Beom-Ryong;Choi, Duck-Soo;Lim, Gyeong-Ho;Kim, Sang-Soo
    • Korean Journal of Organic Agriculture
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    • v.19 no.1
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    • pp.93-107
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    • 2011
  • This research was carried out to investigate invertebrate fauna with organic and conventional pear orchards, which used four collected methods; soil sampling for soil microorganism, pitfall, malaise, and black light trap for over ground species. Collected species were 37 species, 1,184 individuals in organic and 28 species, 501 individuals by soil sampling in conventional pear fields. Those were 38 species, 646 individuals and 29 species, 440 individuals by pitfall trap, 55 species 650 individuals and 47 species, 508 individuals by malaise trap, and 23 species, 201 individuals and 9 species, 42 individuals by black light trap. Collembola was collected 389 individuals in organic which was 5 times than in conventional in soil sampling. In pitfall trap, that was 183 individuals which was 3 times. The diversity indices of organic pear orchards were 1.956 in May, 2.638 in August and those of conventional was 1.426 in May, 2.011 in August in soil sampling. In pitfall trap, the dominant species were spiders, collembollan, and coleopteran. Among Coleoptera, indicator insects for the evaluation of agricultural environment suggested were Eusilpha jakowelewi as organic pear orchard and Anisodactykus punctatipennis and Pheropsophus jessoensis as conventional. Malaise trap was collected dominant species as Diptera and Hymenoptera of Braconidae and Ichneumonidae. The diversity indices of organic pear orchards were 2.952, 3.120, and 2.010 in pitfall, malaise and black light trap in over ground invertebrate sampling. The highest diversity was in malaise trap. The higher diversity indices, the lower dominance indices.