• Proceedings of the Botanical Society of Korea Conference
• /
• 1985.08b
• /
• pp.51-57
• /
• 1985

In order to evlauate feasibility of the gene tagging by the maize transposable element Ac in heterologous plant systems, we have investigated physical distances and directions of transposition of the element in Arabidopsis thaliana and tobacco cultured cell line BY-2. We prepared a T-DNA construct that carried a non-autonomous derivative of Ac with a site for cleavage by endonuclease I-Scel (designated dAc-I-RS element). Another cleavage site was also introduced into the T-DNA region outside dAc-I-RS. A number of transgenic Arabidopsis plants were generated, each of which had a single copy of the T-DNA at a different chromosomal location. To examine the pattern of transposition, three out of these transgenic plants were crossed with the Arabidopsis plant that carried the gene for Ac transposase and progeny in which dAc-I-RS had been transposed were isolated. After digestion of the genomic DNA of these progeny with I-SceI, sizes of segment of DNA were determined byd pulse-field gel electrophoresis. We also performed linkage analysis for the transposed elements and sites of mutations near the elements. Our results with three transgenic lines showed that 50% of all transposition events had occurred within 1, 700 kilo-base pairs (kb) on the same chromosome, with 35% within 200 kb, and that the elements transposed in both directions on the chromosome with roughly equal probability. The data thus indicate that the Ac-Ds system is most useful for tagging of genes that are present within 200 kb of the chromosomal site of Ac in Arabidopsis. In addition, determination of the precise localization of the transposed dAc-I-RS element should definitely assist in map-based cloning of genes around insertion sites. In the present paper, we report typical examples of such gene isolation studies.

• Radiation Oncology Journal
• /
• v.36 no.2
• /
• pp.153-162
• /
• 2018

Purpose: We aimed to evaluate clinical outcomes including progression-free survival (PFS), overall survival (OS), partial response, and complete response in patients who underwent radiation therapy (RT) for mycosis fungoides (MF). Also, we sought to find prognostic factors for clinical outcomes. Materials and Methods: Total 19 patients confirmed with MF between 1999-2015 were retrospectively reviewed. Clinical and treatment characteristics, clinical outcomes, and and toxicities were analyzed. Results: Eleven patients were treated with total skin electron beam radiotherapy (TSEBT) and 8 patients with involved field radiation therapy (IFRT) with median dose of 30 Gy, respectively. The median time interval from diagnosis to RT was 2.6 months (range, 0.4 to 87.3 months). The overall response rate was 100%; 11 patients (57.9%) had a complete response and 8 patients (42.1%) a partial response. The presence of positive lymph node at the time of consultation of RT was associated with lower OS (p = 0.043). In multivariate analysis, PFS was significantly lower for patients with increased previous therapies experienced following RT (p = 0.019) and for patients showing PR during RT (p = 0.044). There were no reported grade 3 or more skin toxicities related with RT. Conclusion: Both IFRT and TSEBT are effective treatment for MF patients. Patients with short disease course before RT or complete response during RT are expected to have longer PFS. Positive lymph node status at the initiation of RT was associated woth poor OS, suggesting other treatment modalities such as low-dose RT for patients with low life-expectancy.

• Korean Journal of Veterinary Research
• /
• v.41 no.2
• /
• pp.189-195
• /
• 2001

Single base substitution and deletion mutation have been introducted into the verotoxin 2 (VT2)A subunit gene from O157:H7 isolates to reduce cytotoxicity of VT2 and the cytotoxicity between wild type toxin and mutant toxoid were compared. A M13-derived recombinant plasmid pEP19RF containing a 940bp EcoRI-PstI fragment of VT2A gene was constructed for oligonucleotide-directed mutagenesis. The duoble mutant pDOEX was constructed by point and deletion mutation of two different highly conserved regions of VT2A encoding active site cleft of enzymatic domain. The key residue, Glu 167(GAA) and the pentamer(WGRIS) consisting of the enzymatic domain were replaced by ASP(GAC) and completely deleted in nucleotide sequence analysis of mutant, respectively. In the comparision of vero cell cytotoxicity between wide type toxin and toxoid from mutant, the wild type toxin expressed cytotoxicity in dilution of $10^{-6}$, but the toxid from mutant did not show cytotoxicity to vero cells.

• Journal of KIISE:Software and Applications
• /
• v.33 no.8
• /
• pp.681-691
• /
• 2006

Clustering is one of widely used methods for grouping thousands of genes by their similarities of expression levels, so that it helps to analyze gene expression profiles. This method has been used for identifying the functions of genes. Fuzzy clustering method, which is one category of clustering, assigns one sample to multiple groups according to their degrees of membership. This method is more appropriate for analyzing gene expression profiles because single gene might involve multiple genetic functions. Clustering methods, however, have the problems that they are sensitive to initialization and can be trapped into local optima. To solve these problems, this paper proposes an evolutionary fuzzy clustering method, where adaptive a-cut based evaluation is used for the fitness evaluation to apply different criteria considering the characteristics of datasets to overcome the limitation of Bayesian validation method that applies the same criterion to all datasets. We have conducted experiments with SRBCT and yeast cell-cycle datasets and analyzed the results to confirm the usefulness of the proposed method.

• Archives of Pharmacal Research
• /
• v.16 no.3
• /
• pp.219-226
• /
• 1993

For the analysis of structure relationship of ar-turmerone analogues, the compounds containing the various substituents on the phenyl ring and 1(or 2)-naphthyl group in the place of phenyl of ar-turmerone were prepared and tested their cytotoxicity against HL-60, K-562, and L1210 leukemia cells in vitro. The substituents at para position are methoxy, phenoxy, methyl, trifluoromethyl, fluoro, and chloro. At meta position methoxy, methyl, trifluoromethyl, or chloro groups at ortho position mathoxy or chloro group were introduced. Against HL-60 and K-562 cells, $ED_{50}$ values of the analogues are ranged from 0.8 to $30.0\;\mu{g/ml}$. Againste L1210 cell, these are located more than $20.0\;\mu{g/ml}$. However, 5-carbone-thoxy-2-methyl-6(1-naphthyl)-2-octen-4-one (5n)possesses $ED_{50}$ valuses 0.8, 2.1, $6.5\;\mu{g/ml}$ against HL-60, L1210 cells, respectively. The electronic nature of the substituents on phenyl ring of ar-tumerone dose not affect the biological activity. Therefore the flat structure of aromatic potion of ar-tumerone analogues is the more important factor for their activity rather than its electronic nature. The potentiation of the cytotoxicity with the enlargement of aromatic ring region also supports the importance of the plane structure of this area. The restriction of the single bond rotation between C-6 and aromatic ring through the introduction of substituents at the ortho position of phenyl ring and the increment of size of alkyl group at C-6 position enhances the activity. Therefore the effective conformation should by the one having the orthogonal arrangement between the aromatic ring and the side chain.

• The Journal of Korean Institute of Electromagnetic Engineering and Science
• /
• v.12 no.3
• /
• pp.360-369
• /
• 2001

This paper proposes the groupwise serial cross interference cancellation(GSCIC) algorithm for coherent detection and analyzes the groupwise serial block interference cancellation(GSBIC) and GSCIC algorithm for an asynchronous wideband DS-CDMA system in a single cell over multipath fading channels. In general, the GSIC algorithm can be grouped into two classes: i.e., GSBIC and GSCIC algorithm. In this paper, the proposed GSCIC algorithm is to improve the performance of the GSBIC algorithm. We compare the performance of the GSCIC and existing GSBIC algorithm in a multipath fading channel to that of the existing SIC algorithm. As a result, the performance of GSCIC algorithm is somewhat better compared with the GSBIC algorithm according to reduction factor $R_{f}$ and is similar to that of the SIC algorithm. And also, the GSBIC and GSCIC algorithms have the advantage that it can be analyzed system performance easily, changing the number of users within a user group according to system capacity.

• Journal of Hydrogen and New Energy
• /
• v.25 no.1
• /
• pp.28-38
• /
• 2014

The organic-inorganic composite membrane in polymer exchange membrane fuel cells (PEMFCs) have several fascinating technological advantages such as a proton conductivity, thermal stability and mechanical properties. As the inorganic filler, silicon carbide (SiC) fiber have been used in various fields due to its unique properties such as thermal stability, conductivity, and tensile strength. In this study, composite membrane was successfully fabricated by modified-silicon carbide fiber. Modified process, as a novel process in SiC, takes reaction by phosphoric acid after oxidation process (generated homogeniusly $SiO_2$ layer on SiC fiber). The mechanical property which was conducted by tensile test of the 5wt% modified-$SiO_2@SiCf$ composite membrane was better than that of Aquivion casting membrane as well as ion cxchange capacity(IEC) and proton conductivity. In addition, the single cell performance was observed that the 5wt% modified-$SiO_2@SiCf$ composite membrane was approximately $0.2A/cm^2$ higher than that of a Aquivion casting electrolyte membrane and electrochemical impedance was improved with the charge transfer resistance and membrane resistance.

• The Journal of Korean Institute of Communications and Information Sciences
• /
• v.27 no.3B
• /
• pp.179-187
• /
• 2002

This paper proposes and analyzes the iterative groupwise equal-delay interference cancellation(IGEIC) algorithm for coherent detection of an asynchronous wideband DS-CDMA system in a single cell over multipath fading channels. The IGEIC algorithm divide users in a system into several groups, and subtract out interference signal from the received signal as many as the number of users within a user group, iteratively. The IGEIC algorithm is also classified into the iterative groupwise equal-delay serial interference cancellation(IGESIC) algorithm and the iterative groupwise equal-delay parallel interference cancellation(IGEPIC) algorithm. In the case of perfect correlation for spreading codes, it shows that the performance of IGESIC and IGEPIC algorithm is the same after interference cancellation of as many as the number of users within a user group, but the performance of IGEPIC algorithm is superior to the IGESIC algorithm just before fecal cancellation within a user group. The results show that (he performance of the two proposed algorithms are also superior to the SIC algorithm by 3dB.

• International Journal of Oral Biology
• /
• v.31 no.2
• /
• pp.45-51
• /
• 2006

R-type($Ca_v2.3$) calcium channel contributes to pain sensation in peripheral sensory neurons. Six isoforms of $Ca_v2.3$ that result from combinations of presence or deletion of three inserts(insert I and insert in the II-III loop, and insert III in N-terminal regions) have been demonstrated to be present in different mammalian tissues. However, the molecular basis of $Ca_v2.3$ in trigeminal ganglion(TG) neurons is not known. In the present study, we determined which isoforms of $Ca_v2.3$ are expressed in rat TG neurons using the RT-PCR analysis. Whole tissue RT-PCR analyses revealed that only two isoforms, $Ca_v2.3a$ and $Ca_v2.3e$, were present in TG neurons. From single-cell RT-PCR, we found that $Ca_v2.3e$ rather than $Ca_v2.3a$ was the major isoform expressed in TG neurons, and $Ca_v2.3e$ was preferentially detected in small-sized neurons that express nociceptive marker, transient receptor potential vanilloid 1(TRPV1). Our results suggest that $Ca_v2.3e$ in trigeminal neurons may be a potential target for the pain treatment.

• Journal of the Korean Chemical Society
• /
• v.19 no.2
• /
• pp.85-91
• /
• 1975

The crystal structure of piperidinothiosemicarbazide, $C_6H_{13}N_3S$, has been determined by single crystal X-ray analysis. The space group is P21/c with four molecules in the unit cell of dimensions $a=14.68{\pm}0.04,\;b=4.59{\pm}0.02,\;c=12.92{\pm}0.04{\AA}\;and\;{\beta}=109.4{\pm}0.2^{\circ}$. Three-dimensional photographic intensities were estimated visually. The structure has been solved by an interpretation of a Patterson synthesis and refined by block-diagonal least-squares methods to give a final R value of 0.14 for 378 observed independent reflections. There are two independent hydrogen bonds in the structure. One of them is of the type N-H${\ldots}$S with the length 3.28 and $3.39{\AA}$, and another is of the type N-H${\ldots}$N with the length $3.03{\AA}$. Apart from the hydrogen bonding system the molecules are held together in the crystal by van der Waals forces.