• 제목/요약/키워드: Single cell analysis/methods

검색결과 202건 처리시간 0.037초

Matrix Metalloproteinase-2 (-1306 C>T) Promoter Polymorphism and Risk of Colorectal Cancer in the Saudi Population

  • Saeed, Hesham Mahmoud;Alanazi, Mohammad Saud;Parine, Narasimha Reddy;Shaik, Jilani;Semlali, Abdelhabib;Alharbi, Othman;Azzam, Nahla;Aljebreen, Abdulrahman;Almadi, Majid;Shalaby, Manal Aly
    • Asian Pacific Journal of Cancer Prevention
    • /
    • 제14권10호
    • /
    • pp.6025-6030
    • /
    • 2013
  • Background: Matrix metalloproteinase-2 (MMP-2) is an enzyme with proteolytic activity against matrix proteins, particularly basement membrane constituents. A single nucleotide polymorphism (SNP) at -1306, which disrupts a Sp1-type promoter site (CCACC box), results in strikingly lower promoter activity with the T allele. In the present study, we investigated whether this MMP-2 genetic polymorphism might be associated with susceptibility to colorectal cancer (CRC) in the Saudi population. We also analyzed MMP-2 gene expression level sin CRC patients and 4 different cancer cell lines. Materials and Methods: TaqMan allele discrimination assays and DNA sequencing techniques were used to investigate the $C^{-1306}T$ SNP in the MMP-2 gene of Saudi colorectal cancer patients and controls. The MMP-2 gene expression level was also determined in 12 colon cancer tissue samples collected from unrelated patients and histologically normal tissues distant from tumor margins. Results and Conclusions: The MMP-2 $C^{-1306}T$ SNP in the promoter region was associated with CRC in our Saudi population and the MMP-2 gene expression level was found to be 10 times higher in CRC patients. The MMP-2 $C^{-1306}T$ SNP is significantly associated with CRC in the Saudi population and this finding suggested that MMP-2 variants might help predict CRC progression risk among Saudis. We propose that analysis of this gene polymorphism could assist in identification of patient subgroups at risk of a poor disease outcome.

ISM 대역에서 무선 헤드셋과 WiFi 간의 양립성 분석 (Analysis on Compatibility between wireless headset and WiFi in ISM bands)

  • 조인경;김태윤;장재웅;장경덕;문귀원
    • 한국정보통신학회논문지
    • /
    • 제19권2호
    • /
    • pp.272-278
    • /
    • 2015
  • 본 논문은 ISM (Industry Science and Medical) 대역에서 동시 다발적으로 운용 가능성이 높은 무선 헤드셋 수신기 시스템과 WiFi (Wireless Fidelity) 시스템간의 간섭 영향을 분석하였다. WiFi는 IEEE (Institute of Electrical and Electronic Engineers ) 802.11b 규격을 바탕으로 하여 특성 및 파라미터를 적용하였으며, 분석방법으로는 최소결합 손실(MCL; Minimum Coupling Loss) 방법과 몬테카를로(MC; Monte Carlo) 방법을 사용하였다. MCL 방법을 통해서 무선 헤드셋의 수신기와 WiFi기기의 송신기 간의 보호이격거리를 도출하였으며, 통계적 분석을 바탕으로 한 MC 방법을 이용해서 5 %이하의 간섭 확률을 만족시켜 주기 위한 단일 간섭원에 따른 보호이격거리 도출 및 희생원의 셀 반경에 따른 허용 가능한 최대 간섭원 수를 도출하였다. 분석 결과는 ISM 대역에서 사용되고 있는 무선 헤드셋 시스템 및 기타 소출력 기기들의 공유방안으로 활용될 것으로 기대된다.

Ginsenoside Rb1 and Rb2 upregulate Akt/mTOR signaling-mediated muscular hypertrophy and myoblast differentiation

  • Go, Ga-Yeon;Jo, Ayoung;Seo, Dong-Wan;Kim, Woo-Young;Kim, Yong Kee;So, Eui-Young;Chen, Qian;Kang, Jong-Sun;Bae, Gyu-Un;Lee, Sang-Jin
    • Journal of Ginseng Research
    • /
    • 제44권3호
    • /
    • pp.435-441
    • /
    • 2020
  • Background: As a process of aging, skeletal muscle mass and function gradually decrease. It is reported that ginsenoside Rb1 and Rb2 play a role as AMP-activated protein kinase activator, resulting in regulating glucose homeostasis, and Rb1 reduces oxidative stress in aged skeletal muscles through activating the phosphatidylinositol 3-kinase/Akt/Nrf2 pathway. We examined the effects of Rb1 and Rb2 on differentiation of the muscle stem cells and myotube formation. Methods: C2C12 myoblasts treated with Rb1 and/or Rb2 were differentiated and induced to myotube formation, followed by immunoblotting for myogenic marker proteins, such as myosin heavy chain, MyoD, and myogenin, or immunostaining for myosin heavy chain or immunoprecipitation analysis for heterodimerization of MyoD/E-proteins. Results: Rb1 and Rb2 enhanced myoblast differentiation through accelerating MyoD/E-protein heterodimerization and increased myotube hypertrophy, accompanied by activation of Akt/mammalian target of rapamycin signaling. In addition, Rb1 and Rb2 induced the MyoD-mediated transdifferentiation of the rhabdomyosarcoma cells into myoblasts. Furthermore, co-treatment with Rb1 and Rb2 had synergistically enhanced myoblast differentiation through Akt activation. Conclusion: Rb1 and Rb2 upregulate myotube growth and myogenic differentiation through activating Akt/mammalian target of rapamycin signaling and inducing myogenic conversion of fibroblasts. Thus, our first finding indicates that Rb1 and Rb2 have strong potential as a helpful remedy to prevent and treat muscle atrophy, such as age-related muscular dystrophy.

Applicative Value of Serum CA19-9, CEA, CA125 and CA242 in Diagnosis and Prognosis for Patients with Pancreatic Cancer Treated by Concurrent Chemoradiotherapy

  • Gu, Yu-Lei;Lan, Chao;Pei, Hui;Yang, Shuang-Ning;Liu, Yan-Fen;Xiao, Li-Li
    • Asian Pacific Journal of Cancer Prevention
    • /
    • 제16권15호
    • /
    • pp.6569-6573
    • /
    • 2015
  • Objective: To evaluate the application value of serum CA19-9, CEA, CA125 and CA242 in diagnosis and prognosis of pancreatic cancer cases treated with concurrent chemotherapy. Materials and Methods: 52 patients with pancreatic cancer, 40 with benign pancreatic diseases and 40 healthy people were selected. The electrochemiluminescence immunoassay method was used for detecting levels of CA19-9, CEA and CA125, and a CanAg CA242 enzyme linked immunoassay kit for assessing the level of CA242. The Kaplan-Meier method was used for analyzing the prognostic factors of patients with pancreatic cancer. The Cox proportional hazard model was applied for analyzing the hazard ratio (HR) and 95% confidential interval (CI) for survival time of patients with pancreatic cancer. Results: The levels of serum CA19-9, CEA, CA125 and CA242 in patients with pancreatic cancer were significantly higher than those in patients with benign pancreatic diseases and healthy people (P<0.001). The sensitivity of CA19-9 was the highest among these, followed by CA242, CA125 and CEA. The specificity of CA242 is the highest, followed by CA125, CEA and CA19-9. The sensitivity and specificity of joint detection of serum CA19-9, CEA, CA125and CA242 were 90.4% and 93.8%, obviously higher than single detection of those markers in diagnosis of pancreatic cancer. The median survival time of 52 patients with pancreatic cancer was 10 months (95% CI7.389~12.611).. Patients with the increasing level of serum CA19-9, CEA, CA125, CA242 had shorter survival times (P=0.047. 0.043, 0.0041, 0.029). COX regression analysis showed that CA19-9 was an independent prognostic factor for patients with pancreatic cancer (P=0.001, 95%CI 2.591~38.243). Conclusions: The detection of serum tumor markers (CA19.9, CEA, CA125 and CA242) is conducive to the early diagnosis of pancreatic cancer and joint detection of tumor markers helps improve the diagnostic efficiency. Moreover, CA19-9 is an independent prognostic factor for patients with pancreatic cancer.

Chemoradiotherapy versus radiotherapy alone following induction chemotherapy for elderly patients with stage III lung cancer

  • Kim, Dong-Yun;Song, Changhoon;Kim, Se Hyun;Kim, Yu Jung;Lee, Jong Seok;Kim, Jae-Sung
    • Radiation Oncology Journal
    • /
    • 제37권3호
    • /
    • pp.176-184
    • /
    • 2019
  • Purpose: It is unclear whether adding concurrent chemotherapy (CT) to definitive radiotherapy (RT) following induction CT is a tolerable and cost effective treatment for non-small-cell lung cancer (NSCLC) patients aged 70 years or older with comorbidities. This study evaluated the actual clinical outcomes between concurrent chemoradiotherapy (CCRT) and RT alone following induction CT or not in patients (≥70 years) in a single institution's clinical practice. Materials and Methods: A total of 82 patients with unresectable stage III NSCLC between 2004 and 2016 were retrospectively analyzed. Their treatment tolerance and clinical outcomes such as overall survival (OS), locoregional recurrence (LRR), treatment toxicities and distant metastasis (DM) were evaluated. Early mortality rates were also evaluated as 4-month mortality after RT. Results: Fifty-four patients received CCRT and 28 patients received RT alone. Induction CT before RT was performed for 68.5% and 50.0% in CCRT and RT alone groups. Treatment tolerance was significantly worse in CCRT (p = 0.046). The median survival was 21.1 and 18.1 months for CCRT and RT alone, which was not statistically significant. LRR and DM were also not different. Most early deaths after CCRT were attributed to non-cancer-related mortality. Acute esophagitis of grade ≥2 occurred more following CCRT (p = 0.017). In multivariate analysis, a Charlson Comorbidity Index (CCI) of ≥5 and a weight loss of ≥5% after RT were associated with poor OS. The factors adversely affecting 4-month survival were a CCI of ≥5 and CCRT. Conclusion: There were no significant differences in OS, LRR, and DM between CCRT and RT alone treatment in elderly patients. However, there was a poorer tolerance and higher incidence of acute esophagitis in the CCRT group. Specifically, when the patients had a CCI of ≥5, RT alone seems to be reasonable with a low probability of early death.

3형 아데노바이러스의 면역조절 유전자 다양성 (Genetic Variation in the Immunoregulatory Gene of Adenovirus Type 3)

  • 최은화;김희섭;이환종
    • Pediatric Infection and Vaccine
    • /
    • 제16권2호
    • /
    • pp.199-204
    • /
    • 2009
  • 목 적: 아데노바이러스 early region 3 (E3) 유전자 단백은 세포독성 세포와 다양한 싸이토카인이 매개하는 세포파괴를 저해하는 기능을 한다. 본 연구는 E3 유전자의 다양성이 아데노바이러스의 분자생물학적 다양성을 설명할 수 있는지 밝히기 위하여 시행되었다. 방 법: 1990년부터 2000년까지 10년 동안 서울대학교 어린이병원에서 하기도 감염증으로 치료받은 소아로부터 분리 된 3형 아데노바이러스 14 주를 대상으로 하여 E3 유전자의 변이와 유전체형과의 연관성을 분석하였다. 결 과: 3형 아데노바이러스의 E3 유전자는 표준 주(M15952)와 비교하여 98%의 일치도를 보였으며, 국내 분리 주간의 일치도는 98.7%이었다. 아미노산 서열의 변이는 20.1 kDa, 20.6kDa, truncated 7.7 kDa, 10.3 kDa, 14.9 kDa, 그리고 15.3kDa에 나타났다. 또한, 14 주 모두에서 truncated 7.7 kDa의 시작 코돈에 missense 변이가 있었으며, 58개(10주) 혹은 94개(4주)의 염기쌍이 소실되는 변이가 동반되었다. 유전체형에 따른 E3 유전자의 변이는 대개 유전체형에 특이하게 나타나 연관성이 높은 것을 알 수 있었다. 결 론: 3형 아데노바이러스 주의 면역기능 조절 유전자 E3의 다양성은 유전체형과의 연관성이 높은 것으로 나타났다.

  • PDF

타액선암에서 c-kit 유전자에 대한 분자생물학적 연구 (Molecular Biologic Analysis of c-kit Gene in Salivary Gland Carcinoma)

  • 서규환;정광윤;우정수;백승국;최성배;김상희;김인선;권순영
    • 대한두경부종양학회지
    • /
    • 제19권2호
    • /
    • pp.121-126
    • /
    • 2003
  • Objectives: The c-kit gene encodes a transmembrane receptor-type tyrosine kinase, which is known to have a significant role in the normal migration and development of germ cells and melanocytes. In the previous studies of c-kit gene, c-kit expressions showed only in adenoid cystic carcinomas, lymphoepithelioma-like carcinomas and myoepithelial carcinomas, but not in others and mutation was not found in any types of salivary carcinoma. We investigate the c-kit expression which may be useful to differentiating adenoid cystic carcinomas from others, and mutation of the gene which may not be exist nor the mechanism of c-kit activation in salivary carcinomas. Material and Methods: The archival tissue samples from 42 salivary carcinomas of major and minor salivary glands were studied for c-kit expression by immunohistochemistry and gene mutation by polymerase chain reaction amplification and single strand conformational polymorphism. Results: The c-kit expressions were noted in 22/24 adenoid cystic carcinomas, 7/9 mucoepidermoid carcinomas, 2/3 acinic cell carcinomas, 3/4 malignant mixed tumors, and one undifferentiated carcinoma. The mutation of c-kit gene was found in 3/24 adenoid cystic carcinomas, 3/8 mucoepidermoid carcinomas, one acinic cell carcinoma, and 2/4 malignant mixed tumors. Conclusion: c-kit protein overexpression is seen in a variety of salivary gland carcinomas, and the mutation of the gene may be the mechanism of c-kit activation in these neoplasms.

자가기질혈관분획을 이용한 수지골 결손 환자의 치료 (Treatment of Phalangeal Bone Defect Using Autologous Stromal Vascular Fraction from Lipoaspirated Tissue)

  • 정태원;지이화;김덕우;동은상;윤을식
    • Archives of Plastic Surgery
    • /
    • 제38권4호
    • /
    • pp.438-444
    • /
    • 2011
  • Purpose: Adipose-derived stromal cells (ASCs) are readily harvested from lipoaspirated tissue or subcutaneous adipose tissue fragments. The stromal vascular fraction (SVF) is a heterogeneous set of cell populations that surround and support adipose tissue, which includes the stromal cells, ASCs, that have the ability to differentiate into cells of several lineages and contains cells from the microvasculature. The mechanisms that drive the ASCs into the osteoblast lineage are still not clear, but the process has been more extensively studied in bone marrow stromal cells. The purpose of this study was to investigate the osteogenic capacity of adipose derived SVF cells and evaluate bone formation following implantation of SVF cells into the bone defect of human phalanx. Methods: Case 1 a 43-year-old male was wounded while using a press machine. After first operation, segmental bone defects of the left 3rd and 4th middle phalanx occurred. At first we injected the SVF cells combined with demineralized bone matrix (DBM) to defected 4th middle phalangeal bone lesion. We used P (L/DL)LA [Poly (70L-lactide-co-30DL-lactide) Co Polymer P (L/DL)LA] as a scaffold. Next, we implanted the SVF cells combined with DBM to repair left 3rd middle phalangeal bone defect in sequence. Case 2 was a 25-year-old man with crushing hand injury. Three months after the previous surgery, we implanted the SVF cells combined with DBM to restore right 3rd middle phalangeal bone defect by syringe injection. Radiographic images were taken at follow-up hospital visits and evaluated radiographically by means of computerized analysis of digital images. Results: The phalangeal bone defect was treated with autologous SVF cells isolated and applied in a single operative procedure in combination with DBM. The SVF cells were supported in place with mechanical fixation with a resorbable macroporous sheets acting as a soft tissue barrier. The radiographic appearance of the defect revealed a restoration to average bone density and stable position of pharyngeal bone. Densitometric evaluations for digital X-ray revealed improved bone densities in two cases with pharyngeal bone defects, that is, 65.2% for 4th finger of the case 1, 60.5% for 3rd finger of the case 1 and 60.1% for the case 2. Conclusion: This study demonstrated that adipose derived stromal vascular fraction cells have osteogenic potential in two clinical case studies. Thus, these reports show that cells from the SVF cells have potential in many areas of clinical cell therapy and regenerative medicine, albeit a lot of work is yet to be done.

로드셀 기반의 실내 위치추적 보완 기법 (Supplementation of the Indoor Location Tracking Techniques Based-on Load-Cells Mechanism)

  • 이남수;문승진
    • 인터넷정보학회논문지
    • /
    • 제17권6호
    • /
    • pp.1-8
    • /
    • 2016
  • 기존의 실내 침입 탐지 및 대상 객체의 이동 경로 추정은 객체가 수신 장치를 갖고 있어야 하는 문제점과 단일 셀(약 $100cm{\times}100cm$)의 공간 내에 객체의 수와 이동 범위를 파악할 수 없는 문제가 지적되어 왔다. 이러한 방법을 해결하기 위해 보편적으로 사용되는 기술인 CCTV를 이용한 방법은 환경적인 변수로 인하여 상당히 제한적일 뿐만 아니라 음영 지역에서(e.g., 상황인식 시스템이 설치되지 않은 곳, 광량이 현저히 낮아 환경의 상황을 파악할 수 없을 경우) 서비스를 받을 수 없다. 이에 본 논문은 센서 네트워크(Sensor Network) 시스템 기반의 객체 탐지 및 대응의 범위 확대가 가능함과 동시에 대상 객체의 이동경로 추적을 능동적으로 대응할 수 있는 실내 보안감시 시스템을 제안한다. 제안된 시스템은 가상의 시나리오에 기반을 두어 구현되었으며, 기존 시설에서 발생할 수 있는 환경적인 단점인 신호의 단절 및 사물의 위치 추정에 대한 손실을 보완하며, 위급한 상황 및 객체에 대한 행동 패턴의 신속한 분석이 가능케 되어, 비상시 사고 예방 및 발생된 상황에 대한 유연한 대처가 가능하리라 사료된다.

누에와 육계 복합 추출물의 in vivo 면역증진 기능성 연구 (Evaluation on Immunopotentiation Activities of Combined Extract of Silkworm and Cinnamomum cassia in vivo)

  • 김경조;박해진;김일규;김민주;신미래;노성수
    • 대한본초학회지
    • /
    • 제33권4호
    • /
    • pp.19-26
    • /
    • 2018
  • Objectives : The aim of this study was to investigate the immunopotentiating activity of combine extract that Silkworm and Cinnamomum cassia. Recently, acute epidemic diseases such as cold and viral respiratory diseases have been emerging. So, interested in immunity enhancement has been increasing, and research on natural products to promote immunity activity has been actively conducted. Methods : To confirm the immunopotentiating activity effect, Silkworm (SW), Cinnamomum cassia (CC), and SWCC combined extracts were treated 14 days at 300 mg/kg/day. The changes of glutamic oxalacetic transaminase (GOT), glutamic pyruvate transaminase (GPT) in serum were analyzed after experiment. The changes in the total spleen cell number were measured. Immune cells in spleen were analyzed using fluorescence activated cell sorter (FACS). also, analyzed the expression of cytokines in spleen. Results : Total number of cells in the spleen and FACS analysis of T lymphocytes activated in the spleen showed that the SWCC combined treated group had much higher frequency of active cells than both single groups. The ratio of CD4+CD8+, CD4+CD69+ and CD4+CD25+ T cells in spleen, SWCC is higher than other groups except Nor in CD4+, CD4+CD69+, CD4+CD25+ T cells. The results of this study suggest that SWCC can help immune function via IL-2, IL-10, IL-12, IFN-${\gamma}$ cytokine production, increased T lymphocytes and splenocyte proliferation. Conclusion : Therefore, these results suggested that the SWCC combined extracts administration increase stronger immunity enhancement than when SW and CC adminstration.