• 제목/요약/키워드: Sequence comparison

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디지털 워터마킹을 위한 각종 시퀀스의 유사도 비교 (Comparison of Similarity to Digital Watermarking using Various Sequences)

  • 송상주;박두순;김선형
    • 한국컴퓨터정보학회논문지
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    • 제6권4호
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    • pp.21-29
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    • 2001
  • 본 논문에서는 웨이브릿 변환 알고리듬을 이용하여 영상을 다해상도 변환하고, 중간주파대역의 중요한 계수에 각종 워터마크 시퀀스를 삽입 후 이의 강인성을 유사도 비교를 통하여 측정한다. 웨이브릿 변환은 주파수 영역 특성과 공간 영역의 특성을 함께 갖고 있는 장점을 가지고 있으며, 워터마크로는 임의 난수, 가우시안 시퀀스, 카오스 시퀀스 그리고 소벨 시퀀스를 이용한다. 다양한 공격에 대하여 실험한 결과 카오스 시퀀스가 다른 시퀀스들에 비해 높은 유사도를 보임으로써 향후 워터마크 시퀀스로 사용하기에 적합함을 보인다.

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강인한 디지털 워터마킹을 위한 웨이브릿에서의 유사도 비교 (A Comparison of Similarity in Wavelet for Robust Digital Watermarking)

  • 송상주;박두순
    • 한국컴퓨터산업학회논문지
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    • 제2권8호
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    • pp.1123-1132
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    • 2001
  • 본 논문에서는 웨이브릿 변환 알고리듬을 이용하여 영상을 다해상도 변환하고, 중간주파대역의 중요한 계수에 각종 워터마크 시퀀스를 삽입 후 이의 강인성을 유사도 비교를 통하여 측정한다. 웨이브릿 변환은 주파수 영역 특성과 공간 영역의 특성을 함께 갖고 있는 장점을 가지고 있다. 다양한 공격에 대하여 실험한 결과 카오스 시퀀스가 다른 시퀀스들에 비해 높은 유사도를 보임으로써 향후 워터마크 시퀀스로 사용하기에 적합함을 보인다.

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Genomic Organization of ancop Gene for ${\alpha}-COP$ Homolog from Aspergillus nidulans

  • Lee, Hwan-Hee;Chae, Shun-Kee;Kim, Jeong-Yoon;Maeng, Pil-Jae;Park, Hee-Moon
    • Mycobiology
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    • 제28권4호
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    • pp.171-176
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    • 2000
  • We have cloned a ${\alpha}-COP$ homolog, ancop, from Aspergillus nidulans by colony hybridization of chromosome specific library using ${\alpha}-COP$ homologous fragment as a probe. The probe DNA was amplified with degenerated primers designed by comparison of conserved region of the amino acid sequences of Saccharomyces cerevisiae ${\alpha}-COP$, Homo sapiens HEP-COP, and Drosophila melanogaster ${\alpha}-COP$. Full length cDNA clone was also amplified by RT-PCR. Comparison of genomic DNA sequence with cDNA sequence obtained by RT-PCR revealed 7 introns. Amino acid sequence similarity search of the anCop with other ${\alpha}-COPs$ gave an overall identity of 52% with S. cerevisiae, 47% with human and bovine, 45% with Drosophila and Arabidopsis. In upstream region from the transcription start site, a putative TATA and CAAT motif were also identified.

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비접지 배전계통에서 영상전류 위상 비교에 의한 고장구간 검출 방법 (A Fault Section Detection Method for Ungrounded System Based on Phase Angle Comparison of Zero-Sequence Current)

  • 양하;최면송;이승재
    • 대한전기학회:학술대회논문집
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    • 대한전기학회 2007년도 제38회 하계학술대회
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    • pp.31-32
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    • 2007
  • In this paper, a fault section detection method is proposed for ungrounded system in the case of a single line-to-ground fault. A conventional method is used for faulted feeder selection according to the angular relationship between zero-sequence currents of the feeders and zero-sequence voltage of the system. Fault section detection is based on the comparison of phase angle of zero-sequence current. Proposed method has been testified in a demo system by Matlab/Simulink simulations. Based on Distribution Automation System(DAS), Feeder Remote Terminal Unit(FRTU) is used to collect those necessary data, at present a demo system is under developing using Manufacturing Message Specification (MMS) in IEC61850 standard.

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스위치드 릴럭턴스 전동기의 권선 방식과 구동 방식에 따른 철손 비료 (A Comparison of Core Losses according to Winding Methods and Switching Sequence in Switched Reluctance Motor)

  • 이지영;이병국;손도;홍정표;허진
    • 대한전기학회:학술대회논문집
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    • 대한전기학회 2005년도 제36회 하계학술대회 논문집 B
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    • pp.1104-1107
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    • 2005
  • This paper presents a comparison of core losses for the four cases of Switched Reluctance Motors (SRM) with different winding method and switching sequence. With concentrated winding SRM, two kinds of switching sequence are considered for one-phase exciting and two-phase simultaneously exciting driving. With both distributed winding and toroidal winding, two-phase exciting driving is considered. The ratio of calculated core losses to input power is able to be used a guide or reference for deciding the winding method and switching sequence of in the initial design stage of SRM.

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Small Multidrug Resistance(smr) 플라스미드 pKH4의 염기서열 결정 (Complete Nucleotide Sequence of Small Multidrug Resistance Plasmid pKH4)

  • 고창학;문경호
    • 약학회지
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    • 제43권6호
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    • pp.789-792
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    • 1999
  • The complete nucleotide sequence of pKH4, a small multidrug resistance (smr) plasmid isolated from multidrug resistant Staphylococcus aureus SA5, was determined. Sequence analysis has revealed that pKH4 has two open reading frames for Rep and Smr proteins. The comparison of the amino acid sequence of Smr protein of pKH4 with those of other Smr proteins of various Staphylococcus showed that Smr protein of pKH4 is a new member of the SMR family.

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여름철 서식 한국산 홍조류 둥근돌김 (Porphyra suborbiculata)의 형태 및 18S rDNA 염기서열 분석 (Morphology and Sequence Analysis of Nuclear 18S rDNA from the Summer Strain of Porphyra suborbiculata (Rhodophyta) in Korea)

  • ;김명숙;최재석;조지영;진형주;홍용기
    • 한국수산과학회지
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    • 제33권6호
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    • pp.489-495
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    • 2000
  • The 185 ribosomal RNA gene (185 rDNA) of the marine alga Porphyra sp. 723 (Bangiales, Rhodophyta) was amplified using the polymerase chain reaction and its sequence was analysed. The Porphyra species was a summer strain collected on rocks in upper intertidal zone at Ikidae, Pusan on 23rd July 1999. The fronds were $1{\~}5 cm$ long, monostromatic, and orbicular or ovate shaped, They had spinulate processes at margin of the frond, Comparison of this 185 rDNA sequence with the other Forphyra species indicates that Porphyra sp. 723 has the same 185 rDNA sequence derived from Porphyra suborbiculata (NCBI access number; AB 013180) except one base pair substitution in 2327 base pairs.

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염화반응법으로 제조된 TaCl5의 분리공정에 관한 비교 연구 (A Comparison Study on the Separation Process of TaCl5 from the Chlorinated Reaction Product)

  • 조정호;박소진;최영윤
    • Korean Chemical Engineering Research
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    • 제44권3호
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    • pp.259-264
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    • 2006
  • 염화반응에 의한 $TaCl_5$의 제조에서 반응생성물 중 $NbCl_5$, $TiCl_4$, $FeCl_2$ 등이 주요 불순물로 존재하게 된다. $TaCl_5$$NbCl_5$는 증류나 수소 환원법에 의해 쉽게 분리가 되므로, 반응생성물에서 $TaCl_5/NbCl_5$ 혼합물을 99.9% 이상 순도로 분리하기 위해 2기의 연속식 증류공정을 사용하여 light한 성분과 heavy한 성분을 제거하는 공정을 구성하였다. 본고에서는 순차배열(direct sequence)과 비 순차배열(indirect sequence)으로서의 두 분리공정에 대한 비교연구를 상용성 화학공정모사기인 Aspen Plus 13.1을 이용해서 전산모사를 수행하였다. 비교결과 순차배열이 비 순차배열에 비하여 초기 장치투자비용이나 운전비용에서 좀 더 우수한 것으로 나타났다.

Global Sequence Homology Detection Using Word Conservation Probability

  • Yang, Jae-Seong;Kim, Dae-Kyum;Kim, Jin-Ho;Kim, Sang-Uk
    • Interdisciplinary Bio Central
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    • 제3권4호
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    • pp.14.1-14.9
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    • 2011
  • Protein homology detection is an important issue in comparative genomics. Because of the exponential growth of sequence databases, fast and efficient homology detection tools are urgently needed. Currently, for homology detection, sequence comparison methods using local alignment such as BLAST are generally used as they give a reasonable measure for sequence similarity. However, these methods have drawbacks in offering overall sequence similarity, especially in dealing with eukaryotic genomes that often contain many insertions and duplications on sequences. Also these methods do not provide the explicit models for speciation, thus it is difficult to interpret their similarity measure into homology detection. Here, we present a novel method based on Word Conservation Score (WCS) to address the current limitations of homology detection. Instead of counting each amino acid, we adopted the concept of 'Word' to compare sequences. WCS measures overall sequence similarity by comparing word contents, which is much faster than BLAST comparisons. Furthermore, evolutionary distance between homologous sequences could be measured by WCS. Therefore, we expect that sequence comparison with WCS is useful for the multiple-species-comparisons of large genomes. In the performance comparisons on protein structural classifications, our method showed a considerable improvement over BLAST. Our method found bigger micro-syntenic blocks which consist of orthologs with conserved gene order. By testing on various datasets, we showed that WCS gives faster and better overall similarity measure compared to BLAST.

New Construction Method for Quaternary Aperiodic, Periodic, and Z-Complementary Sequence Sets

  • Zeng, Fanxin;Zeng, Xiaoping;Zhang, Zhenyu;Zeng, Xiangyong;Xuan, Guixin;Xiao, Lingna
    • Journal of Communications and Networks
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    • 제14권3호
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    • pp.230-236
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    • 2012
  • Based on the known binary sequence sets and Gray mapping, a new method for constructing quaternary sequence sets is presented and the resulting sequence sets' properties are investigated. As three direct applications of the proposed method, when we choose the binary aperiodic, periodic, and Z-complementary sequence sets as the known binary sequence sets, the resultant quaternary sequence sets are the quaternary aperiodic, periodic, and Z-complementary sequence sets, respectively. In comparison with themethod proposed by Jang et al., the new method can cope with either both the aperiodic and periodic cases or both even and odd lengths of sub-sequences, whereas the former is only fit for the periodic case with even length of sub-sequences. As a consequence, by both our and Jang et al.'s methods, an arbitrary binary aperiodic, periodic, or Z-complementary sequence set can be transformed into a quaternary one no matter its length of sub-sequences is odd or even. Finally, a table on the existing quaternary periodic complementary sequence sets is given as well.