• Title/Summary/Keyword: Sequence Search

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A Design for Efficient Similar Subsequence Search with a Priority Queue and Suffix Tree in Image Sequence Databases (이미지 시퀀스 데이터베이스에서 우선순위 큐와 접미어 트리를 이용한 효율적인 유사 서브시퀀스 검색의 설계)

  • 김인범
    • Journal of the Korea Computer Industry Society
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    • v.4 no.4
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    • pp.613-624
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    • 2003
  • This paper proposes a design for efficient and accurate retrieval of similar image subsequences using the multi-dimensional time warping distance as similarity evaluation tool in image sequence database after building of two indexing structures implemented with priority queue and suffix tree respectively. Receiving query image sequence, at first step, the proposed method searches the candidate set of similar image subsequences in priory queue index structure. If it can not get satisfied results, it retrieves another candidate set in suffix tree index structure at second step. The using of the low-bound distance function can remove the dissimilar subsequence without false dismissals during similarity evaluating process between query image sequence and stored sequences in two index structures.

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A SELF SCALING MULTI-STEP RANK ONE PATTERN SEARCH ALGORITHM

  • Moghrabi, Issam A.R.
    • Journal of the Korean Society for Industrial and Applied Mathematics
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    • v.15 no.4
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    • pp.267-275
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    • 2011
  • This paper proposes a new quickly convergent pattern search quasi-Newton algorithm that employs the multi-step version of the Symmetric Rank One (SRI). The new algorithm works on the factorizations of the inverse Hessian approximations to make available a sequence of convergent positive bases required by the pattern search process. The algorithm, in principle, resembles that developed in [1] with multi-step methods dominating the dervation and with numerical improvements incurred, as shown by the numerical results presented herein.

Leucine Rich Repeat Sequence of the ${\delta}$ Endotoxin Family of Bacillus thuringiensis

  • Vudayagiri, Suvarchala;Jamil, Kaiser
    • BMB Reports
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    • v.33 no.1
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    • pp.89-91
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    • 2000
  • In this investigation we report our search for the presence of Leucine Rich Repeats (LRRs) in various Bacillus thuringiensis (Bt) sub species. Leucine rich repeats are short sequence motifs present in some proteins. The consensus sequence corresponding to the LRR was present in Crystal proteins of Bacillus thuringiensis sub species. This LRR sequence has been predicted to be involved in proteinprotein interactions or receptor binding functions, hence the importance of this study.

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Movement Search in Video Stream Using Shape Sequence (동영상에서 모양 시퀀스를 이용한 동작 검색 방법)

  • Choi, Min-Seok
    • Journal of Korea Multimedia Society
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    • v.12 no.4
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    • pp.492-501
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    • 2009
  • Information on movement of objects in videos can be used as an important part in categorizing and separating the contents of a scene. This paper is proposing a shape-based movement-matching algorithm to effectively find the movement of an object in video streams. Information on object movement is extracted from the object boundaries from the input video frames becoming expressed in continuous 2D shape information while individual 2D shape information is converted into a lD shape feature using the shape descriptor. Object movement in video can be found as simply as searching for a word in a text without a separate movement segmentation process using the sequence of the shape descriptor listed according to order. The performance comparison results with the MPEG-7 shape variation descriptor showed that the proposed method can effectively express the movement information of the object and can be applied to movement search and analysis applications.

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Shipyard Skid Sequence Optimization Using a Hybrid Genetic Algorithm

  • Min-Jae Choi;Yung-Keun Kwon
    • Journal of the Korea Society of Computer and Information
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    • v.28 no.12
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    • pp.79-87
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    • 2023
  • In this paper, we propose a novel genetic algorithm to reduce the overall span time by optimizing the skid insertion sequence in the shipyard subassembly process. We represented a solution by a permutation of a set of skid ids and applied genetic operators suitable for such a representation. In addition, we combined the genetic algorithm and the existing heuristic algorithm called UniDev which is properly modified to improve the search performance. In particular, the slow skid search part in UniDev was changed to a greedy algorithm. Through extensive large-scaled simulations, it was observed that the span time of our method was stably minimized compared to Multi-Start search and a genetic algorithm combined with UniDev.

Soft-Start Open Circuit Voltage and Constant Current Sequence Control of 2.5[kW] HID Search Lamp for Ship (선박용 2.5[kW] HID 탐사등의 Soft-Start 방식에 의한 개방회로 전압과 점등전류 순차 제어)

  • Park, Noh-Sik;Kwon, Soon-Jae;Lee, Dong-Hee
    • Journal of the Korean Institute of Illuminating and Electrical Installation Engineers
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    • v.22 no.8
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    • pp.45-51
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    • 2008
  • HID(High Intensity Discharge) search lamp for shipment requires a high open circuit and output current compare than vehicle. This paper presents a soft-start open circuit voltage and constant current sequence control method for 2.5[kW] HID search lamp. The proposed method controls the opal circuit voltage and discharge current of HID lamp according to ignition signal with a simple 8-bit micro-processor and PWM device. For the stable control of lamp, micro-processor checks the output voltage and current. And the checked signals are compared with ignition signal and changes the control mode for stable operation. An ignition signal and micro-processor change the control mode from open circuit voltage contort to constant current control. The proposed control scheme is verified from experimental tests of 2.5[kW] HID search lamp for shipment.

A Study on Web Services for Sequence Similarity search in the Workflow Environment (워크플로우 환경에서의 대규모 서열 유사성 검색 웹 서비스에 관한 연구)

  • Jun, Jin-Young
    • Journal of the Korea Society of Computer and Information
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    • v.13 no.6
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    • pp.41-49
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    • 2008
  • In recent years, a life phenomenon using a workflow management tool in bioinformatics has been actively researched. Workflow management tool is the base which enables researchers to collaborate through the re-use and sharing of service, and a variety of workflow management tools including MyGrid project's Taverna, Kepler and BioWMS have been developed and used as the open source. This workflow management tool can model and automate different services in spatially-distant area in one working space based on the web service technology. Many tools and databases used in the bioinformatics are provided in the web services form and are used in the workflow management tool. In such the situation, the web services development and stable service offering for a sequence similarity search which is basically used in the bioinformatics can be essential in the bioinformatics field. In this paper, the similarity retrieval speed of biology sequence data was improved based on a Linux cluster, and the sequence similarity retrieval could be done for a short time by linking with the workflow management tool through developing it in the web services.

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Tabu Search for Job Shop Scheduling (Job Shop 일정계획을 위한 Tabu Search)

  • Kim, Yeo-Keun;Bae, Sang-Yun;Lee, Deog-Seong
    • Journal of Korean Institute of Industrial Engineers
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    • v.21 no.3
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    • pp.409-428
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    • 1995
  • Job shop scheduling with m different machines and n different jobs is a NP-hard problem of combinatorial optimization. The purpose of the paper is to develop the heuristic method using tabu search for job shop scheduling to minimize makespan or mean flowtime. To apply tabu search to job shop scheduling problem, in this paper we propose the several move methods that employ insert moves in order to generate the neighbor solutions, and present the efficient rescheduling procedure that yields active schedule for a changed operation sequence by a move of operations. We also discuss the tabu search techniques of diversifying the search of solution space as well as the simple tabu search. By experiments, we find the appropriate tabu list size and tabu attributes, and analyze the proposed tabu search techniques with respect to the quality of solutions and the efforts of computation. The experimental results show that the proposed tabu search techniques using long-term memory function have the ability to search a good solution, and are more efficient in the mean flowtime minimization problem than in the makespan minimization.

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Maximum Power Point Tracking Control Employing Fibonacci Search Algorithm for Photovoltaic Power Generation System

  • Miyatake Masafumi;Kouno Tooru;Nakano Motomu
    • Proceedings of the KIPE Conference
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    • 2001.10a
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    • pp.622-625
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    • 2001
  • Photovoltaic generation systems need MPPT (Maximum Power Point Tracking) control because the output power depends on the operating voltage and current. Therefore, many researchers propose various types of MPPT control methods. A new MPPT control scheme is proposed in this paper in order to realize higher efficiency with simple calculation. The line search algorithm with fibonacci sequence which is one of the optimizing method is employed for the MPPT. The line search method is modified for real-time operation. The method is verified by simulations and experiments. It is concluded that the scheme can respond fast variation of irradiance.

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Sequencing in Mixed Model Assembly Lines with Setup Time : A Tabu Search Approach (준비시간이 있는 혼합모델 조립라인의 제품투입순서 결정 : Tabu Search 기법 적용)

  • 김여근;현철주
    • Journal of the Korean Operations Research and Management Science Society
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    • v.13 no.1
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    • pp.13-13
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    • 1988
  • This paper considers the sequencing problem in mixed model assembly lines with hybrid workstation types and sequence-dependent setup times. Computation time is often a critical factor in choosing a method of determining the sequence. We develop a mathematical formulation of the problem to minimize the overall length of a line, and present a tabu search technique which can provide a near optimal solution in real time. The proposed technique is compared with a genetic algorithm and a branch-and-bound method. Experimental results are reported to demonstrate the efficiency of the technique.