• Title/Summary/Keyword: Screened Soil

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Studies on the Cellulase of Penicillium sp. Isolated from Soils. -(1) Isolation of Penicillium sp. C8-14 strain from Kwangneung soil- (토양에서 분리한 Penicillum sp. 가 생산하는 Cellulase에 관한 연구(제1보) -광능지역 토양으로부터 Penicillum sp. C8-14주(株)의 분리-)

  • Kim, Yong-Bae;Yi, Pyung-Kuk;Choi, Seung-Ho
    • The Korean Journal of Mycology
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    • v.1 no.1
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    • pp.23-28
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    • 1973
  • The soil of Kwangneung area(Kyeunggi-Do) was inoculated directly into wheat-bran-media and after $3{\sim}4$ days of incubation, a Penicillium species whose cellulase activity was 1011u/g was isolated. With the treatment of mutagenic agents an improved strain(cellulase activity: 1303u/g) was obtained. This strain was screened again by mono-spore isolation method. Finally a strain C8-14 (cellulase activity: 2351u/g) which had lesser spores than the wild strain was obtained.

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Studies on Screening and Isolation of Esterase Inhibitors from Soil Microorganisms(I).Identification of strain DMC-498 producing esterase inhibitors

  • Lee, Seung-Jung;Kim, Ha-Won;Choi, Chil-Choi;Kim, Byong-Kak
    • Archives of Pharmacal Research
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    • v.10 no.2
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    • pp.103-109
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    • 1987
  • To find microorganisms producing esterase inhibitors, microbes were isolated from soil samples that were collected at different locations in Korea and screened for inhibitory activities. One of the inhibitor-producing strains was named strain DMC-498. This strain was found to be a new species of the genus Streptomyces by comparison with the characteristics of morphology and metabolisms of the other species of the genus.

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Evaluating the Influence of Liquid Organic Polymer on Soil Aggregation and Growth of Perennial Ryegrass (유기중합물이 토양의 입단화와 페레니얼 라이그래스의 성장에 미치는 영향)

  • Lee, Sang-Kook;Minner, David
    • Asian Journal of Turfgrass Science
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    • v.25 no.1
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    • pp.69-72
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    • 2011
  • Soil aggregate is a vigorous procedure including soil physical, chemical, and biological processes. Pore space created by binding these particles together improves retention and exchange of air and water. Various researches have reported that the benefits of organic polymers that may increase aggregate stability. The purpose of the study was to determine if a liquid organic polymer mixture has any influence on perennial ryegrass quality or soil aggregation. $Turf2Max^{(R)}$ was applied to two soils as a source of liquid organic polymer. Fine-loamy soil from local Iowa topsoil with 4.0% organic matter was screened and dried. Commercial baseball infield clay, $QuickDry^{(R)}$, was used as the second soil There were three rates of liquid organic polymer (0, 2, and 4%). there was no visual improvement in turf grass color, quality, or growth by using organic polymer. It is possible that aggregate stability increases with use of organic polymer. The aggregate stability study needs to be repeated in the greenhouse and then substantiated under field conditions for these preliminary observations.

Biological control of Botrytis cinerea on tomato using antagonistic bacteria

  • Hong, Sung-Jun;Kim, Yong-Ki;Jee, Hyeong-Jin;Park, Jong-Ho;Han, Eun-Jung;An, Nan-Hee;Kim, Jung-Hyun;Goo, Hyung-Jin
    • Korean Journal of Organic Agriculture
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    • v.19 no.spc
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    • pp.251-254
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    • 2011
  • Botrytis cinerea infects stems and leaves of greenhouse tomatoes and can cause serious economic losses. This study was conducted to develop environment-friendly control method against tomato gray mold. Antagonistic microorganisms (bacteria) were screened for control activity against Botrytis cinerea, both in vitro and in vivo, using stem sections. One hundred bacterial strains were isolated from the rhizospheric soil of various plants including tomato. These strains were screened for growth inhibition of Botrytis cinerea on agar plate by the dual culture and thirty strains showing strongly inhibitory effect against the pathogen were selected first. Among thirty strains, JB 5-12, JB 22-2, JB 22-3, U 4-8 and U46-6 reduced significantly disease incidence, when applied simultaneously with the pathogen. These results suggested that five antagonistic bacteria strains selected have the potential to control tomato gray mold in organic farming.

Plant Growth-Promoting Trait of Rhizobacteria Isolated from Soil Contaminated with Petroleum and Heavy Metals

  • Koo, So-Yeon;Hong, Sun-Hwa;Ryu, Hee-Wook;Cho, Kyung-Suk
    • Journal of Microbiology and Biotechnology
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    • v.20 no.3
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    • pp.587-593
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    • 2010
  • Three hundred and seventy-four rhizobacteria were isolated from the rhizosphere soil (RS) or rhizoplane (RP) of Echinochloa crus-galli, Carex leiorhyncha, Commelina communis, Persicaria lapathifolia, Carex kobomugi, and Equisetum arvense, grown in contaminated soil with petroleum and heavy metals. The isolates were screened for plant growth-promoting trait (PGPT), including indole acetic acid (IAA) productivity, 1-aminocyclopropane-1-carboxylic acid (ACC) deaminase activity, and siderophore(s) synthesis ability. IAA production was detected in 86 isolates (23.0%), ACC deaminase activity in 168 isolates (44.9%), and siderophore(s) synthesis in 213 isolates (57.0%). Among the rhizobacteria showing PGPT, 162 isolates had multiple traits showing more than two types of PGPT. The PGPT-possesing rhizobacteria were more abundant in the RP (82%) samples than the RS (75%). There was a negative correlation (-0.656, p<0.05) between the IAA producers and the ACC deaminase producers. Clustering analysis by principal component analysis showed that RP was the most important factor influencing the ecological distribution and physiological characterization of PGPT-possesing rhizobacteria.

Heavy Metal Uptake by Native Plants in Mine Hazard Area (광해지역 토착 자생식물에 의한 중금속 흡수)

  • Choi, Hyung-Wook;Choi, Sang-Il;Yang, Jae-Kyu
    • Journal of Soil and Groundwater Environment
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    • v.15 no.3
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    • pp.27-33
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    • 2010
  • The purpose of this study was in search of native plant species showing metal-resistant property and excessively accumulating heavy metals in metal-contaminated soil or abandoned mines as well as in evaluation of applicability of phytoremediation. In the study area, species showing excessively accumulating heavy metals were a shepherd´s purse, pampas grass, a Korean lettuce, a Hwansam vine, the Korean persicary, a foxtail, a goosefoot, and a water pepper. The first screened plant species in Sambo mine were as shepherd's purse, Korean lettuce and pampas grass Among them the shepherd´s purse can be excluded because it is a seasonal plant and has lower removal capacity for heavy metals. The Korean lettuce was also excluded because of having lower removal capacity for heavy metals. Pampas grass is a highly bionic plant species constantly growing from spring. However it has weak points such as little accumulation capacity for zinc as well as small values of an accumulation factor and a translocation factor. Another problem is regarded as removal of roots after the clean up if pampas grass is applied to a farmland. In Sanyang mine, wormwood and Sorijaengi were considered as adaptable species.

Studies on Antibiotic Producers of Korean Soil Microbes(I) -Isolation and Antibiotic Activity of Streptomyces Strain DMC-72- (한국(韓國) 토양균(土壤菌)중 항생물질(抗生物質) 생성균(生成菌)에 관한 연구(硏究)(제1보)(第1報) -스트렙토마이세스속(屬) 균주(菌株) DMC-72호(號)의 분리(分離) 및 항균작용(抗菌作用)-)

  • Kim, Kwang-Wook;Choi, Eung-Chil;Shim, Mi-Ja;Kim, Byong-Kak
    • Korean Journal of Pharmacognosy
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    • v.15 no.1
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    • pp.15-23
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    • 1984
  • To find antimicrobial strains of the soil microorganisms in Korea, they were isolated from the soil samples of different locations and screened for antibiotic activity against several standard microbes. An isolate among them had an antibacterial activity against gram-positive bacteria. The examination of its morphological and biochemical characteristics according to the International Streptomyces Project methods showed that it belongs to the genus Streptomyces. The strain was named DMC-72. The strain appears to be a new strain when it was compared with the species within the genus which have been so far reported. The antibiotic metabolite of the strain was produced in submerged culture method. It was found to be a quinone compound and was named soulomycin. This strain was also found to produce an ${\alpha}-amylase$ inhibitor in the submerged culture.

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Selection and Characterization of Forest Soil Metagenome Genes Encoding Lipolytic Enzymes

  • Hong, Kyung-Sik;Lim, He-Kyoung;Chung, Eu-Jin;Park, Eun-Jin;Lee, Myung-Hwan;Kim, Jin-Cheol;Cho, Gyung-Ja;Cho, Kwang-Yun;Lee, Seon-Woo
    • Journal of Microbiology and Biotechnology
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    • v.17 no.10
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    • pp.1655-1660
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    • 2007
  • A metagenome is a unique resource to search for novel microbial enzymes from the unculturable microorganisms in soil. A forest soil metagenomic library using a fosmid and soil microbial DNA from Gwangneung forest, Korea, was constructed in Escherichia coli and screened to select lipolytic genes. A total of seven unique lipolytic clones were selected by screening of the 31,000-member forest soil metagenome library based on tributyrin hydrolysis. The ORFs for lipolytic activity were subcloned in a high copy number plasmid by screening the secondary shortgun libraries from the seven clones. Since the lipolytic enzymes were well secreted in E. coli into the culture broth, the lipolytic activity of the subclones was confirmed by the hydrolysis of p-nitrophenyl butyrate using culture supernatant. Deduced amino acid sequence analysis of the identified ORFs for lipolytic activity revealed that 4 genes encode hormone-sensitive lipase (HSL) in lipase family IV. Phylogenetic analysis indicated that 4 proteins were clustered with HSL in the database and other metagenomic HSLs. The other 2 genes and 1 gene encode non-heme peroxidase-like enzymes of lipase family V and a GDSL family esterase/lipase in family II, respectively. The gene for the GDSL enzyme is the first description of the enzyme from metagenomic screening.

Feasibility Test for Phytoremediation of Heavy Metals-Contaminated Soils using Various Stabilizers (중금속 오염토양에 대한 안정화 및 식물상 정화공법의 동시 적용연구)

  • Jeon, Jongwon;Bae, Bumhan;Kim, Younghun
    • Journal of the Korean GEO-environmental Society
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    • v.13 no.3
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    • pp.59-70
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    • 2012
  • In this study, to select the best stabilizer for the heavy metals-contaminated soil from a smelter area during phytoremediation, a plant uptake experiment and a soil stabilization were simultaneously applied using Pteris multifida Poir. and five pre-screened stabilizers(zeolite, Mn dioxide, slag, Ca oxide, and magnetite). The extracted heavy metal was measured and compared using a 3 step sequential extraction for the soil samples. The growth rate of the plant was also evaluated. The stabilizers stabilized heavy metals in soil and reduced the extraction rate. Magnetite and calcium oxide showed better results than other stabilizers. The stabilizers enhanced the growth of the plant. All the heavy metals except for arsenic were concentrated in roots while arsenic was concentrated in leaves of the plant. It is concluded that the stabilizers can minimize the heavy metal release from the contaminated soil during phytoremediation and stimulated the growth of plant. These effects of stabilizers could compensate for some weak points of phytoremediation such as reaching of heavy metals by rainwater.

Effectiveness of Various Pseudomonas spp. and Burkholderia caryophylli Containing ACC-Deaminase for Improving Growth and Yield of Wheat (Triticum aestivum L.)

  • Shaharoona, B.;Jamro, G.M.;Zahir, Z.A.;Arshad, M.;Memon, K.S.
    • Journal of Microbiology and Biotechnology
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    • v.17 no.8
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    • pp.1300-1307
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    • 2007
  • This study assessed the possible role of different traits in selected plant growth-promoting rhizobacteria (PGPR) for improving wheat growth and yield under natural conditions. Rhizobacteria exhibiting 1-aminocyclopropane-1-carboxylate (ACC)-deaminase activity were isolated and screened for their growth-promoting activity in wheat under axenic conditions. Five isolates belonging to Pseudomonas and one Burkholderia caryophylli isolate that showed promising performances under axenic conditions were selected and characterized for in vitro ACC-deaminase activity, chitinase activity, auxin production, P solubilization, and root colonization. These isolates were then used as inocula for wheat cultivated under natural conditions in pot and/or field trials. Significant increases in root elongation, root weight, tillers per pot, 1,000-grain weight, and grain and straw yields were observed in response to inoculation with PGPR in the pot trials. Inoculation with these PGPR was also effective under field conditions and increased the wheat growth and yield significantly. However, the efficacy of the strains was inconsistent under the axenic, pot, and field conditions. Pseudomonas fluorescens ($ACC_{50}$), which exhibited a relatively high in vitro ACC-deaminase activity, chitinase activity, auxin production, and P solubilization and more intensive root colonization, was the most efficient isolate under the field conditions. Therefore, these results demonstrated that ACC-deaminase activity is an efficient parameter for the selection of promising PGPR under axenic conditions. However, additional traits of PGPR, including auxin production, chitinase activity, P solubilization, and root colonization, are also important for selecting PGPR as biofertilizers.