• 제목/요약/키워드: SCAR program

검색결과 19건 처리시간 0.026초

Development of an ISSR-Derived SCAR Marker in Korean Ginseng Cultivars (Panax ginseng C. A. Meyer)

  • Lee, Jei-Wan;Kim, Young-Chang;Jo, Ick-Hyun;Seo, A-Yeon;Lee, Jeong-Hoon;Kim, Ok-Tae;Hyun, Dong-Yun;Cha, Seon-Woo;Bang, Kyong-Hwan;Cho, Joon-Hyeong
    • Journal of Ginseng Research
    • /
    • 제35권1호
    • /
    • pp.52-59
    • /
    • 2011
  • Recently, new ginseng cultivars having superior agricultural traits have been developed in Korea. For newly developed plant cultivars, the identification of distinctiveness is very important factors not only in plant cultivar management but also in breeding programs. Thus, eighty-five inter simple sequence repeat (ISSR) primers were applied to detect polymorphisms among six major Korean ginseng cultivars and two foreign ginsengs. A total of 197 polymorphic bands with an average 5.8 polymorphic bands and 2.9 banding patterns per assay unit across six Korean ginseng cultivars and foreign ginsengs from 236 amplified ISSR loci with an average 6.9 loci per assay unit were generated by 34 out of 85 ISSR primers. Three species of Panax ginseng including the Korean ginseng cultivars, P. quinquefolius, and P. notoginseng, could be readily discriminated using most tested primers. UBC-821, UBC-868, and UBC-878 generated polymorphic bands among the six Korean ginseng cultivars, and could distinguish them from foreign ginsengs. Sequence characterized amplified region (SCAR) marker system was introduced in order to increase the reproducibility of the polymorphism. One SCAR marker, PgI821C650, was successfully converted from the randomly amplified polymorphism by UBC-821. It showed the expected dominant polymorphism among ginseng samples. In addition, the specific polymorphism for Sunwon was generated by treating Taq I restriction enzyme to polymerase chain reaction products of PgI821C650. These results will serve as useful DNA markers for identification of Korean ginseng, especially Sunwon cultivar, seed management, and molecular breeding program supplemented with marker-assisted selection.

미혼모의 입양결정 과정에 관한 연구 -해석학적 근거이론 방법 접근- (A Study of Adoption Decision Process of Non-married Mothers -Hermeneutic Grounded Theory Methodology Approach-)

  • 임해영;이혁구
    • 한국사회복지학
    • /
    • 제65권3호
    • /
    • pp.53-78
    • /
    • 2013
  • 이 연구는 미혼모가 경험한 입양결정 과정의 전반적 의미를 이해하고자 Rennie가 제안한 해석학적 근거이론의 방법을 활용하였다. 분석 결과, 191개 의미단위, 46개 하위범주, 11개 해석학적 범주가 구성되었고, 연구 참여자들의 입양결정 과정을 관통하는 핵심범주는 '모성의 밀어냄과 끌어안음의 이중성 속에 새겨진 흔적안고 살아가기'로 상정되었다. 미혼모들의 입양결정 과정은 임신 인지, 현실 회피, 입양 탐색, 혼란 증폭, 결단, 합리화 혹은 상실의 단계로 나타났다. 이러한 연구결과를 토대로 미혼모의 입양결정 과정은 모성 실현의 또 다른 방식이 될 수도 있다는 점, 이들의 삶의 질을 제고할 수 있는 심리사회적 지지프로그램의 필요성을 제안하였다.

  • PDF

Species Identification of the Tropical Abalone (Haliotis asinina, Haliotis ovina, and Haliotis varia) in Thailand Using RAPD and SCAR Markers

  • Klinbunga, Sirawut;Amparyup, Piti;Leelatanawit, Rungnapa;Tassanakajon, Anchalee;Hirono, Ikuo;Aoki, Takashi;Jarayabhand, Padermsak;Menasveta, Piamsak
    • BMB Reports
    • /
    • 제37권2호
    • /
    • pp.213-222
    • /
    • 2004
  • A randomly amplified polymorphic DNA (RAPD) analysis was used to identify the species- and population-specific markers of abalone; Haliotis asinina, H. ovina, and H. varia in Thai waters. Fifteen species-specific and six population-specific RAPD markers were identified. In addition, an 1650 bp band (UBC195) that was restricted to H. ovina from the Gulf of Thailand (east) was also found. All of the specific RAPD markers were cloned and sequenced. Twenty pairs of primers were designed and specificity-tested (N = 12 and 4 for target and non-target species, respectively). Seven primer pairs (CUHA1, 2, 4, 11, 12, 13, and 14) were specifically amplified by H. asinina DNA, whereas a single pair of primers showed specificity with H. ovina (CUHO3) and H. varia (CUHV1), respectively. Four primer pairs, including CUHA2, CUHA12, CUHO3, and CUHV1, were further examined against 216 individuals of abalone (N = 111, 73, and 32, respectively). Results indicated the species-specific nature of all of them, except CUHO3, with the sensitivity of detection of 100 pg and 20 pg of the target DNA template for CUHA2 and CUHA12 and CUHV1, respectively. The species-origin of the frozen, ethanol-preserved, dried, and boiled H. asinina specimens could also be successfully identified by CUHA2.

변형 근치적 유방절제술 후 방사선치료에서 볼루스 적용횟수에 대한 고찰 (A Study on the Necessary Number of Bolus Treatments in Radiotherapy after Modified Radical Mastectomy)

  • 홍채선;김종식;김영곤;박영환
    • 대한방사선치료학회지
    • /
    • 제18권2호
    • /
    • pp.113-117
    • /
    • 2006
  • 목 적: 유방암으로 진단 받고 변형 근치적 유방절제술(Modified Radical Mastectomy)후 흉벽에 방사선치료를 시행 받고 있는 환자를 대상으로 볼루스(Bolus) 적용에 따른 흉벽(흉터, 수술봉합부위)의 피부선량 변화를 분석 하여 적절한 볼루스 적용횟수를 얻고자 한다. 대상 및 방법: 유방암으로 진단받고 변형 근치적 유방절제술 후 방사선치료를 받고 있는 4명의 여성 환자(우측 2명 좌측 2명)를 대상으로 하였다. 흉벽 방사선조사는 4 MV광자선으로 매일 2 Gy씩 주 5회, 접선조사로 치료하였고, 총 조사선량은 50 Gy였는데 동측 내유방림프절은 포함하지 않았다. 치료 계획을 위한 전산화단층촬영에서 흉터 부위의 위치 확인을 위해 방사선비투과성물질인 Angio-catheter를 흉터 위에 위치시켰다. 획득한 영상을 이용하여 치료계획을 세웠고, 전산화치료계획장치에서 흉터부위 좌우 2 cm 영역을 포함하는 두께 0.5 cm, 넓이 6 cm의 볼루스를 적용시켰다. 계획한 내용을 바탕으로 볼루스를 적용하지 않은 경우와 볼루스를 적용한 경우에 대하여 선량분포 변화와 피부선량을 비교 분석하였고 열형광선량계 (Thermoluminescent dosimetry: TLD, Harshaw, USA)를 이용하여 관심 부위(흉터 부위 3 지점, 흉터 좌측 1 cm 3지점, 흉터 우측 1 cm 3지점) 9개 지점의 선량을 실측하였다. 결 과: 전산화치료계획장치에서 얻어진 선량분포를 통해 분석한 결과, 볼루스를 적용하지 않은 경우와 볼루스를 적용한 경우 모두에서 흉벽 부위에 $95{\sim}100%$ 선량이 감싸고 있었으나, 흉터 주위 피부선량에 있어서는 볼루스를 적용하지 않은 경우($50{\sim}75%$)와 볼루스를 적용한 경우($100{\sim}105%$)가 큰 차이를 보였다. 선량분포를 통한 관심지점의 피부선량은 볼루스를 적용하지 않은 경우에 비해 볼루스를 적용한 경우에서 환자 1번 23.3%, 환자 2번 35.6%, 환자 3번 34.9%, 환자 4번 41.7%의 선량 증가를 보였다. 볼루스를 적용하지 않은 경우와 볼루스를 적용한 경우의 TLD 평균 측정치는 환자 1번 161.1 cGy 209.3 cGy 환자 2번 150.2 cGy, 200 cGy, 환자 3번 150.5 cGy, 211.4 cGy, 환자 4번 155.5 cGy 198.6 cGy의 결과를 얻었다. 결 론: 본 원에서 변형 근치적 유방절제술 후 흉벽 방사선치료의 가장 적절한 볼루스 적용 횟수는 전 치료횟수의 $50{\sim}60%$ 적용이다.

  • PDF

Development of PCR-Based Sequence Characterized DNA Markers for the Identification and Detection, Genetic Diversity of Didymella bryoniae with Random Amplified polymorphic DNA(RAPD)

  • Kyo, Seo-Il;Shim, Chang-Ki;Kim, Dong-Kil;Baep, Dong-Won;Lee, Seon-Chul;Kim, Hee-Kyu
    • 한국식물병리학회:학술대회논문집
    • /
    • 한국식물병리학회 2003년도 정기총회 및 추계학술발표회
    • /
    • pp.130-130
    • /
    • 2003
  • Gummy stem blight pathogen is very difficult not only to monitor the inoculum levels prior to host infection, and also it is destructive and hard to control in field condition. We have applied RAPD technique to elucidate the genetic diversity of the genomic DNA of Didymella bryoniae and also to generate specific diagnostic DNA probe useful for identification and detection. The 40 primers produced clear bands consistently from the genomic DNA of twenty isolates of Didymella bryoniae, and two hundred seventy-three amplified fragments were produced with 40 primers. The combined data from 273 bands was analyzed by a cluster analysis using UPGMA method with an arithmetic average program of NTSYS-PC (Version 1.80) to generate a dendrogram. At the distance level of 0.7, two major RAPD groups were differentiated among 20 strains. RAPD group (RG) I included 8 isolates from watermelon except one isolate from melon. RAPD group (RG) IV included 12 isolates from squash, cucumber, watermelon and melon.. In amplification experiment with SCAR specific primer RG1F-RG1R resulted in a single band of 650bp fragment only for 8 isolates out of 20 isolates that should be designated as RAPD Group 1. However, same set of experiment done with RGIIF-RGIIR did not result in any amplified product.. Our attempts to detect intraspecific diversity of ITS region of rDNA by amplifying ITS region and 17s rDNA region for 20 isolates and restriction digestion of amplified fragment with 12 enzymes did not reveal polymorphic band. In order to develop RAPD markers for RGIV specific primer, a candidate PCR fragment( ≒1.4kb) was purified and Southern hybridized to the amplified fragment RGIV isolates. This promising candidate probe recognized only RGIV isolates

  • PDF

도시지역 어린이집 및 유치원 어린이의 안전사고 발생 실태 (A Study on the Occurrences of Accidents among Children in Nursery School and Kindergartens)

  • 이은숙;김정남
    • 한국보건간호학회지
    • /
    • 제17권1호
    • /
    • pp.96-112
    • /
    • 2003
  • The purpose of this study was to determine how often toddlers and preschoolers in kindergartens have accidents and what factors affect the accident rate. The study population consisted of 150 children who were attending at nursery schools and 150 children who were attending at kindergartens. The data was collected from ten nursery schools and five kindergartens from five districts in Daegu. The questionnaires were distributed to teachers of participating nursery schools and kindergartens to be completed using nursing care records in the institutions and by interviewing children's parents about all of the accidents happened in a previous year. Data were collected during the period of August 1 through 31, 2002. The results of the study are as follow: 1. Among 300 children, 282 had 506 accidental injuries during the study period. 2. The month, the day and the time with the highest accident rate were April. Monday, and between 2 and 4 o'clock in the afternoon, respectively. 3. Locations where the injury took place most included nursery schools or kindergartens, around the homes of the children, and inside the home. 4. Most accidents were occurred due to lack of carefulness of the children, and the most prevalent forms of injury was abrasions. 5. Most frequently injured part of the body was legs of the children. 6. Most injuries were healed within three days and required first aid measures to disinfect the wound. Mostly, these were performed by family members at home. Some children go to the hospital to suture the open wound. Most frequent type of complication was scar formation and the cost of the treatment ranged from 9,000 to 30,000 won. 7. Children's age. sex, birth order. personality. type of family composition. type of residency. father's occupation, father's age, and mother's age were significantly related to the frequency of injury among children. Children who were in nursery schools and kindergartens need their assessment for accident involving condition according to seasons, time. place. This study provided a very useful and important data to prepare accident prevention education program and accident prevention strategies, and to develop Injury Surveillance System.

  • PDF

Lycopene Content and Fruit Morphology of Red, Pink, Orange, and Yellow Fleshed Watermelon (Citrullus lanatus) Germplasm Collections

  • Noh, Jae-Jong;Hur, On-Sook;Ro, Na-Young;Lee, Jae-Eun;Hwang, Ae-Jin;Kim, Bit-Sam;Rhee, Ju-hee;Yi, Jung Yoon;Kim, Ji Hyun;Lee, Ho-Sun;Sung, Jung-Sook;Kim, Myung-Kon;Assefa, Awraris Derbie
    • 한국자원식물학회지
    • /
    • 제33권6호
    • /
    • pp.624-637
    • /
    • 2020
  • High-quality and high-phytonutrient watermelon fruits have strong market opportunities besides their health related benefits. Hence, investigating quality and nutritional related traits of watermelon genetic resources could provide important baseline data in breeding for increased lycopene content thereby increasing the marketability of watermelon. To this end, we have examined some fruit morphological traits and lycopene content of 105 genetic resources. Seeds, originally obtained from 22+ countries, were obtained from the National Agrobiodiversity Center, Jeonju, South Korea, grown in an experimental field and harvested at a fully mature stage. The size of pistil scar (SPS), the width of stripes (WS), weight of fruit (WF), length of fruit (LF), width of fruit (WIF), the thickness of pericarp (TP), soluble solids content (SSC), fruit shape in longitudinal section, ground color of skin, the intensity of the green color of skin, fruit shape at the apical part, grooving distribution, conspicuousness of stripes, and main color of the flesh were recorded on the field and inside laboratory and the lycopene was measured using spectrophotometric and HPLC methods. Watermelon fruits have shown a diverse morphological characters. Red and pink fleshed fruits dominated in the entire collections. Fruits with higher thickness of rind were found to exhibit less soluble solid content (SSC). Korean origin fruits were characterized by intermediate SSC while the United States of America (USA), Russia (RUS), Tajikistan (TJK), Turkmenistan (TKM), Taiwan (TWN), and Uruguay (URY) originated fruits had the highest SSC. The lycopene content varied between 41.37 and 182.82 ㎍/g, 2.81 and 163.72 ㎍/g, and 3.54 and 255.47 ㎍/g using HPLC, UV-Vis spectrophotometer, and microplate reader spectrophotometer, respectively. Red- and pink-fleshed fruits had the highest levels of lycopene content compared to the yellow- and orange-fleshed. Lycopene content had a significant positive correlation with SSC, however, no correlations were detected between lycopene and other quantitative fruit morphological characters. Our study demonstrated high diversity exists in fruit morphological traits and lycopene content of the germplasm collections which provide beneficial baseline data for a future breeding program and utilization of watermelon germplasm collections in gene banks for the maintenance and improvement of the current levels of production, marketability, and health-related benefit of watermelon fruits.

황기약침이 전층피부손상 마우스의 치유에 미치는 영향 (Effect of Astragali Radix Pharmacocupuncture for Wound Healing of Full-Thickness Skin Wound in Mouse)

  • 홍창호;강경화;윤화정;윤현민;송춘호;김철홍
    • 한방안이비인후피부과학회지
    • /
    • 제31권1호
    • /
    • pp.22-31
    • /
    • 2018
  • Objectives : In this study, we investigated whether Astragali Radix Pharmacocupuncture (ARP) has an effective on the full thickness defect wound healing process of mouse. Methods : A total of 50 mice (ICR mouse, 7 week-old male) were divided into control group and ARP group. A single full thickness skin defect was made on the dorsal side of the each mouse using an 8mm diameter biopsy punch. Control group were treated with 0.2㎖ saline and ARP group were treat with 0.2ml ARP at 8 points around the wound every three days total 4 times during the experimental period. The change in wound size, contraction rate, healing rate, and epithelization rate was measured by digital images taken on days 3, 6, 9, and 13, and evaluated using a digital image analysis program. Tissues were collected for histological analysis, RT-PCR, and Western blot on days 3, 6, 9, and 15. Results : The results are as follows. ARP group accelerated the rate of wound contraction, wound healing and epithelization compared to the control group. ARP group showed the decrease of inflammatory cells in early inflammatory phase compared to the control group. ARP group upregulated PECAM-1 mRNA and protein expression compared to the control group. ARP group inhibited the scar width and area compared to the control group. Conclusions: ARP showed positive effects on wound healing through the inhibition of inflammatory reaction and increase of PECAM-1 expression related to the wound healing process.

완전 편측성 순구개열 신생아 환자의 술전 비치조 정형장치와 구순열 수술이 치조골 정형에 미치는 효과 (Effect of presurgical nasoalveolar molding (PNAM) appliance and cheiloplasty on alveolar molding of complete unilateral cleft lip and palate patients)

  • 김나영;이신재;백승학
    • 대한치과교정학회지
    • /
    • 제33권4호
    • /
    • pp.235-245
    • /
    • 2003
  • 본 연구의 목적은 술전 비치조 정형장치 (PNAM)와 구순열 수술이 치조골 정형에 미치는 효과를 평가하는 것이다. 연구 대상은 장기간 추적검사가 가능했던 16명의 완전 편측성 순구개열 환자 (남자 10명, 여자 5명, 평균 파열부 최단거리: 10.46mm) 이었으며 서울대학교 치과병원 교정과에서 동일 교정의에게서 술전 비치조 정형장치로 치료받은 후 동일 외과의 에 의해서 회전-전진법을 사용한 구순열 수술을 받았다. 평균 치조 정형기간은 13.10주였으며 구순열 수술 후 내원시까지 기간은 평균 8.31주였다. 초진시 (T0, 평균연령 : $37.0\pm27.89$일), 치조골 정형술 후(T1, 평균연령 : $119.25\pm40.18$일), 구순열 수술 후 (T2, 평균연령 : $190.81\pm42.78$일)에 환자들의 상악모형을 각각 채득하였고 1:1 비율로 사진을 찍은 후 컴퓨터 프로그램을 이용하여 7개의 선, 5개의 각도 계측항목을 측정하였고 paired t-test를 사용하여 통계학적 분석을 시행하였다. 1. 치조 분절의 후방부위는 치조골 정형술과 구순열 수술의 영향을 받지 않는 안정적인 구조였다. 2. 치조골 정형술에 의한 파열부 간격의 폐쇄는 주로 대분절 전체의 후방 굴곡으로 이루어졌다. 3. 치조골 정형술 기간 동안 대분절의 전방 성장이 억제되었으나 구순열 수술 후에는 전방성장이 회복되었다. 4. 구순열 수술 후 전방부 분절간 각도가 증가한 이유는 구순열 수술 이후 형성된 구순 반흔조직 의 압력 에 의하여 치조골 정형술 효과가 나타난 것이다.