• 한국미생물·생명공학회지
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• 제16권2호
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• pp.85-91
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• 1988

Ruminococcus albus와 Ruminococcus flavefaciens 두 균주를 사용하여 기질 cellulose로부터 균체량과 생성물 형성에 대해서 available electron balance를 적응한 에너지 효율이 검토되었다. 실험 결과로부터 진정수율(true growth yield) 값인 η$_{max}$, η$^{max}_{th}$ 두 값과 유지 계수값인 m$_{e}$ 값이 이론적 접근으로부터 얻어진 값들과 비교 검토되어졌다. 실험치는 $Y^{max}_{ATP}$=10.5g cells/mole ATP 값을 적용한 이론치와 비슷하므로 Ruminococcus albus, Ruminococcus flavefaciens의 $Y^{max}_{ATP}$ 값은 10.5와 비슷한 값을 갖는 것으로 사료되어진다.

• Journal of Animal Science and Technology
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• 제51권5호
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• pp.379-386
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• 2009

비타민은 필수영양소로서 가축에서도 비타민제의 사용의 필요성이 인식되고 있는 추세이나 반추동물에서는 아직 비타민의 활성기전 및 효과가 정확히 명시되어 있지 않고 있는 실정이다. 따라서 본 연구는 실험 1에서 비타민 A를 조농비율을 다르게 한 사료로 첨가하여 반추위 내 공급하였을 때 반추위 내의 pH, VFA 생성 및 cellulose 소실율 등에 어떠한 영향을 미치는지를 배양시간별로 조사하였다. 실험 2에서는 반추위내 섬유소분해박테리아인 Ruminococcus flavefaciens를 사용하여 비타민 A의 추가 공급이 섬유소분해박테리아의 가스발생량, 효소활력 등에 영향을 미치는 지를 조사하였다. 실험 1의 결과 pH는 저농후사료구에서 고농후사료구보다는 높은 경향이 있었으며 Cellulose 소화율은 전반적으로 뚜렷하지는 않았지만 배양초기에 비타민 A 첨가군에서 무첨가군보다 높았고 휘발성지방산의 생성량도 비타민 A 추가 공급시 증가하는 결과가 나타났다. 비타민 A 공급에 따른 Total VFA 생성량은 저농후사료구에서보다 고농후사료구에서 더욱 분명하게 대부분의 배양시간대별로 비타민A 첨가구에서 유의하게 높았다. 이는 사료내 농후사료 함량이 높을수록 비타민 A의 필요성이 더 증가한다고 추정 할 수 있다. 실험 2에서 섬유소분해박테리아 균별 비타민A 첨가 효과를 보기 위하여 Ruminococcus flavefaciens의 Vitamin A 이용성을 가스발생량, 효소활력 등을 조사하였다. R.F는 효소활력부분이 조금 높은 경향을 보였으나 전반적으로 뚜렷하지는 않았다. 즉, R.F.는 비타민 A를 요구하지 않는다고 사료된다. 실험 1과 실험 2의 결과를 종합하여 볼 때 실험 2는 섬유소분해박테리아인 R.F. 균주는 비타민 A를 필요로 하지 않으나, 실험 1의 rumen inoculum을 이용한 in vitro 배양실험 결과 농후사료 함량이 높고 비타민 A를 첨가한 HA구에서 배양초기에 cellulose 소화율 및 VFA 생성량이 높게 나타난 것으로 보아 R.F. 이외의 반추위내 다른 섬유소 분해박테리아가 비타민 A를 이용하였다고 사료된다.

• 미생물학회지
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• 제34권3호
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• pp.91-95
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• 1998

한우의 반추위액에서 섬유소를 분해하는 균주 GPC-1, GPC-2, GNR-1, GNR-2, GNR-3를 선별하였다. 분리주 GPC-1과 GPC-2는 Gram 양성구균이며 편성혐기균으로서 Ruminococcus속으로 분류되었다. 분리주 GNR-1, GNR-2 및 GNR-3는 Gram 음성 간균이며 혐기균으로서 내생포자형성 유무에 따라 포자 형성균인 GNR-3는 Clostridium속으로 분류하고 포자를 형성하지 않은 균은 $H_2S$ 생성유무에 따라 Bacteroides 속과 Butyrivibrio 속으로 분류되었다. 종수준의 동정을 위하여 당분해능과 생화학적 조사를 통하여 GPC-1는 Ruminococcus albus로, GPC-2는 Ruminococcus flavefaciens로, GNR-1는 Bacteroides succinogenes로, GNR-2는 Butyrivibrio fibrisolvens로, GNR-3는 Clostridium cellobioparum로 각각 동정하였다.

• Asian-Australasian Journal of Animal Sciences
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• 제31권1호
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• pp.54-62
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• 2018

Objective: Due to the threat of global warming, the livestock industry is increasingly interested in exploring how feed additives may reduce anthropogenic greenhouse gas emissions, especially from ruminants. This study investigated the effect of Rhodophyta supplemented bovine diets on in vitro rumen fermentation and rumen microbial diversity. Methods: Cannulated Holstein cows were used as rumen fluid donors. Rumen fluid:buffer (1:2; 15 mL) solution was incubated for up to 72 h in six treatments: a control (timothy hay only), along with substrates containing 5% extracts from five Rhodophyta species (Grateloupia lanceolata [Okamura] Kawaguchi, Hypnea japonica Tanaka, Pterocladia capillacea [Gmelin] Bornet, Chondria crassicaulis Harvey, or Gelidium amansii [Lam.] Lamouroux). Results: Compared with control, Rhodophyta extracts increased cumulative gas production after 24 and 72 h (p = 0.0297 and p = 0.0047). The extracts reduced methane emission at 12 and 24 h (p<0.05). In particular, real-time polymerase chain reaction analysis indicated that at 24 h, ciliate-associated methanogens, Ruminococcus albus and Ruminococcus flavefaciens decreased at 24 h (p = 0.0002, p<0.0001, and p<0.0001), while Fibrobacter succinogenes (F. succinogenes) increased (p = 0.0004). Additionally, Rhodophyta extracts improved acetate concentration at 12 and 24 h (p = 0.0766 and p = 0.0132), as well as acetate/propionate (A/P) ratio at 6 and 12 h (p = 0.0106 and p = 0.0278). Conclusion: Rhodophyta extracts are a viable additive that can improve ruminant growth performance (higher total gas production, lower A/P ratio) and methane abatement (less ciliateassociated methanogens, Ruminococcus albus and Ruminococcus flavefaciens and more F. succinogenes.

• Asian-Australasian Journal of Animal Sciences
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• 제12권5호
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• pp.708-714
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• 1999

Fermentation of legume fodder tree leaves by rumen microorganisms was evaluated. The substrates were sun-dried, ground leaves. Gas and volatile fatty acid (VFAs) production were estimated. Using gas production as an index of fermentation at 12 h, the leaves tested ranked as follows; Chamaecytisus palmensis>Gliricidia sepium>Sebania sesban>Tephrosia bracteolate>Leucaena pallida>Vernonia amygdalina>Acacia sieberiana>Sesbania goetzei>Acacia angustissima. Using VFA production, the ranking was a follows; G. sepium>S. sesban>S. goetzei>L. pallida>C. palmensis/V. amygdalina>T. bracteolate> A. sieberiana>A. angustissima. Absolute gas or VFA production rates, were also used to rank the leaves. Extracts (70% acetone) of A. angustissima inhibited the growth of Ruminococcus albus 8, R. flavefaciens FD-1, Prevotella ruminicola D3ID and Streptococcus bovis JBI while the trowth of Selenomonas ruminantium D was depressed when 0.6 ml exracts were added. C. palmensis water extracts enhanced cellulose hydrolysis by R. flavefaciens FD-1. All extracts reduced celluloysis by R. albus 8. R. flavefaciens FD-1 hydrolyzed more (p<0.001) cellulose than R. albus 8.

• Asian-Australasian Journal of Animal Sciences
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• 제14권6호
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• pp.880-884
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• 2001

Rumen microbiology research has undergone several evolutionary steps: the isolation and nutritional characterization of readily cultivated microbes; followed by the cloning and sequence analysis of individual genes relevant to key digestive processes; through to the use of small subunit ribosomal RNA (SSU rRNA) sequences for a cultivation-independent examination of microbial diversity. Our knowledge of rumen microbiology has expanded as a result, but the translation of this information into productive alterations of ruminal function has been rather limited. For instance, the cloning and characterization of cellulase genes in Escherichia coli has yielded some valuable information about this complex enzyme system in ruminal bacteria. SSU rRNA analyses have also confirmed that a considerable amount of the microbial diversity in the rumen is not represented in existing culture collections. However, we still have little idea of whether the key, and potentially rate-limiting, gene products and (or) microbial interactions have been identified. Technologies allowing high throughput nucleotide and protein sequence analysis have led to the emergence of two new fields of investigation, genomics and proteomics. Both disciplines can be further subdivided into functional and comparative lines of investigation. The massive accumulation of microbial DNA and protein sequence data, including complete genome sequences, is revolutionizing the way we examine microbial physiology and diversity. We describe here some examples of our use of genomics- and proteomics-based methods, to analyze the cellulase system of Ruminococcus flavefaciens FD-1 and explore the genome of Ruminococcus albus 8. At Illinois, we are using bacterial artificial chromosome (BAC) vectors to create libraries containing large (>75 kbases), contiguous segments of DNA from R. flavefaciens FD-1. Considering that every bacterium is not a candidate for whole genome sequencing, BAC libraries offer an attractive, alternative method to perform physical and functional analyses of a bacterium's genome. Our first plan is to use these BAC clones to determine whether or not cellulases and accessory genes in R. flavefaciens exist in clusters of orthologous genes (COGs). Proteomics is also being used to complement the BAC library/DNA sequencing approach. Proteins differentially expressed in response to carbon source are being identified by 2-D SDS-PAGE, followed by in-gel-digests and peptide mass mapping by MALDI-TOF Mass Spectrometry, as well as peptide sequencing by Edman degradation. At Ohio State, we have used a combination of functional proteomics, mutational analysis and differential display RT-PCR to obtain evidence suggesting that in addition to a cellulosome-like mechanism, R. albus 8 possesses other mechanisms for adhesion to plant surfaces. Genome walking on either side of these differentially expressed transcripts has also resulted in two interesting observations: i) a relatively large number of genes with no matches in the current databases and; ii) the identification of genes with a high level of sequence identity to those identified, until now, in the archaebacteria. Genomics and proteomics will also accelerate our understanding of microbial interactions, and allow a greater degree of in situ analyses in the future. The challenge is to utilize genomics and proteomics to improve our fundamental understanding of microbial physiology, diversity and ecology, and overcome constraints to ruminal function.

• 한국유기농업학회지
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• 제20권3호
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• pp.327-343
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• 2012

In order to develop a high cellulolytic direct-fed microorganism (DFM) for ruminant productivity improvement, this study isolated cellulolytic bacteria from the rumen of Holstein dairy cows, and compared their cellulolytic abilities via DM degradability, gas production and cellulolytic enzyme activities. Twenty six bacteria were isolated from colonies grown in Dehority's artificial (DA) medium with 2% agar and cultured in DA medium containing filter paper at $39^{\circ}C$ for 24h. 16s rDNA gene sequencing of four strains from isolated bacteria showed that H8, H20 and H25 strains identified as Ruminococcus flavefaciens, and H23 strain identified as Fibrobacter succinogenes. H20 strain had higher degradability of filter paper compared with others during the incubation. H8 (R. flavefaciens), H20 (R. flavefaciens), H23 (F. succinogenes), H25 (R. flavefaciens) and RF (R. flavefaciens sijpesteijn, ATCC 19208) were cultured in DA medium with filter paper as a single carbon source for 0, 1, 2, 3, 4 and 6 days without shaking at $39^{\circ}C$, respectively. Dry matter degradability rates of H20, H23 and H25 were relatively higher than those of H8 and RF since 2 d incubation. The cumulative gas production of isolated cellulolytic bacteria increased with incubation time. At every incubation time, the gas production was highest in H20 strain. The activities of carboxymethylcellulase (CMCase) and Avicelase in the culture supernatant were significantly higher in H20 strain compared with others at every incubation time (p<0.05). Therefore, although further researches are required, the present results suggest that H20 strain could be a candidate of DFM in animal feed due to high cellulolytic ability.

• Asian-Australasian Journal of Animal Sciences
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• 제14권6호
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• pp.797-802
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• 2001

Two strains of rumen fungi (Piromyces rhizinflata B157, Orpinomyces joyonii SG4) and three strains of rumen cellulolytic bacteria (Ruminococcus albus B199, Ruminococcus flavefaciens FD1 and Fibrobacter succinogenes S85) were used as mono-cultures or combinationally arranged as co- and sequential-cultures to assess the relative contributions and interactions between rumen fungi and cellulolytic bacteria on rice straw degradation. The rates of dry matter degradation of co-cultures were similar to those of corresponding bacterial mono-cultures. Compared to corresponding sequential-cultures, the degradation of rice straw was reduced in all co-cultures (P<0.01). Regardless of the microbial species, the cellulolytic bacteria seemed to inhibit the degradation of rice straw by rumen fungi. The high efficiency of fungal cellulolysis seems to affect bacterial degradation rates.

• Asian-Australasian Journal of Animal Sciences
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• 제20권2호
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• pp.200-207
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• 2007

In vitro rumen incubation studies were conducted to determine effects of initial pH on bacterial attachment and fiber digestion. Ruminal fluid pH was adjusted to 5.7, 6.2 and 6.7, and three major fibrolytic bacteria attached to rice straw in the mixed culture were quantified with real-time PCR. The numbers of attached and unattached Fibrobacter succinogenes, Ruminococcus flavefaciens and Ruminocococcus albus were lower (p<0.05) at initial pH of 5.7 without significant difference between those at higher initial pH. Lowering incubation media pH to 5.7 also increased bacterial numbers detached from substrate regardless of bacterial species. Dry matter digestibility, gas accumulation and total VFA production were pH-dependent. Unlike bacterial attachment, maintaining an initial pH of 6.7 increased digestion over initial pH of 6.2. After 48 h in vitro rumen fermentation, average increases in DM digestion, gas accumulation, and total VFA production at initial pH of 6.2 and 6.7 were 2.8 and 4.4, 2.0 and 3.0, and 1.2 and 1.6 times those at initial pH of 5.7, respectively. The lag time to reach above 2% DM digestibility at low initial pH was taken more times (8 h) than at high and middle initial pH (4 h). Current data clearly indicate that ruminal pH is one of the important determinants of fiber digestion, which is modulated via the effect on bacterial attachment to fiber substrates.

• Asian-Australasian Journal of Animal Sciences
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• 제21권6호
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• pp.818-823
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• 2008

The interaction of fibre degrading microbes and methanogens was studied using two forages, lucerne (Medicago sativa) hay and maize (Zea mays) hay, as substrate and 2-bromoethanesulphonic acid (BES) as an additive in an in vitro gas production test. Gas and methane production (ml/g dry matter) were significantly higher (p<0.05) on lucerne as compared to maize hay. Inclusion of BES in the incubation medium significantly suppressed methane emission irrespective of substrate. The population density of total bacteria, fungi, Ruminococcus flavefaciens and Fibrobacter succinogenes was higher, whereas that of methanogens was lower with maize hay as compared to lucerne as substrate. BES suppressed methanogen population by 7 fold on lucerene and by 8.5 fold on maize at 24 h incubation as estimated by real time-PCR. This suppression was accompanied by almost complete (>98% of control) inhibition of methanogenesis. The proportion of acetate decreased, whereas that of propionate increased significantly by inclusion of BES, resulting in narrowing of acetate to propionate ratio. In vitro true digestibility (IVTD) of lucerne was significantly higher as compared to maize but BES inclusion did not affect IVTD.