• Bulletin of the Korean Chemical Society
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• 제24권6호
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• pp.824-828
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• 2003

Our previous quantum mechanical calculations using polyalanine model systems showed that the monodipolemacrodipoleinteractions selectively stabilize α-helices and make it possible for α-helices to be formed inhydrophobic environment where the solvent effect is not available. The monodipole-macrodipole interactionsin α-helices were studied molecular mechanically using various point-charge systems available. The resultsshow that all the point-charge systems used in the calculations produce the monodipole-macrodipoleinteractions up to about 60% compared to the results of the quantum mechanical calculations. The results ofmolecular mechanical calculations are explained and discussed compared to the results of the quantummechanical calculations.

• 공업화학
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• 제9권3호
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• pp.361-363
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• 1998

Faujasite 표면 수산기를 나타내는 cluster 모델의 전체에너지, 쌍극자모멘트, Wiberg결합차수 및 형식전하를 CNDO/2법을 이용하여 계산하였다. 이에 관한 양자화학적 고찰은 faujasite 표면 수산기의 산세기가 그 기하학적 구조와 Si/Al비에 의존되어 있음을 보여준다. B산성의 세기는 가교형 수산기가 독립형 수산기에 비해 컸었다. 모델분자들의 구조적 안정성은 Si/Al비가 클수록 증가하였다.

• Bulletin of the Korean Chemical Society
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• 제35권1호
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• pp.151-157
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• 2014

We have reported the reaction probability, integral reaction cross section, and rate constant for the title system calculated with the aid of a time-dependent wave packet approach. The ab initio potential energy surface (PES) of Prudente et al. (Chem. Phys. Lett. 2009, 474, 18) is employed for the purpose. The calculations are carried out over the collision energy range of 0.05-1.4 eV for the two reaction channels of H + LiH ${\rightarrow}$ Li + $H_2$ and $H_b$ + $LiH_a$ ${\rightarrow}$ $LiH_b$ + $H_a$. The Coriolis coupling (CC) effect are taken into account. The importance of including the Coriolis coupling quantum scattering calculations are revealed by the comparison between the Coriolis coupling and the centrifugal sudden (CS) approximation calculations.

• Bulletin of the Korean Chemical Society
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• 제24권6호
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• pp.691-694
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• 2003

We report a quantum wavepacket study on the characteristic bimodal translational energy distribution of photostimulated desorbed Xe from an oxidized silicon (001) surface observed by Watanabe and Matsumoto, Faraday Discuss. 117 (2000) 203. We have simulated the theoretical translational energy distributions based on wavepacket calculations with a sudden transition and averaging model to reproduce the experiment. We discuss the desorption mechanism and suggest a very strong position dependence of the deexcitation processes for Xe/oxidized Si(001).

• Bulletin of the Korean Chemical Society
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• 제31권9호
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• pp.2633-2636
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• 2010

3-Acetyl-5-benzoyl-6-methyl-2-phenyl-4H-pyran-4-one has been subjected to condensation with a series of primary amines (ethylamine - octylamine) to clarify the proposed mechanism in our previous study. The reactions of the shorter amines of the series (ethylamine - butylamine) yielded unsymmetric pyridinone products, whereas the other amines (pentylamine - octylamine) yielded symmetrical pyridinones. The starting material and the products as well as the intermediates have been subjected to theoretical analysis by quantum chemical calculations at B3LYP/6-31G(d,p) level, which provided supporting data for the experimental findings.

• 한국진공학회:학술대회논문집
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• 한국진공학회 2010년도 제39회 하계학술대회 초록집
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• pp.93-93
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• 2010

In this talk, I will introduce a reactive force field (ReaxFF) molecular dynamics (MD) simulation. In contrast to common MD simulations with empirical FFs, we can predict chemical reactions (bond breaking and formation) in large scale systems with the ReaxFF simulation where all of the ReaxFF parameters are from quantum mechanical calculations such as density functional theory to provide high accuracy. Accordingly, the ReaxFF simulation provides both accuracy of quantum mechanical calculations and description of large scale systems of atomistic simulations at the same time. Here, I will first discuss a theory in the ReaxFF including the differences from other empirical FFs, and then show several applications for studying chemical reactions of SiHx radicals on Si surfaces, which is an important issue in Si process.

• Bulletin of the Korean Chemical Society
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• 제12권2호
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• pp.228-238
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• 1991

Generalized multichannel quantum defect theory [C. H. Greene et al. Phys. Rev., A26, 2441 (1982)] is implemented to the vibrational predissociation of triatomic van der Waals molecules. As this is the first one of such an application, the dependences of the quantum defect parameters on energy and radius are examined carefully. Calculation shows that, in the physically important region, quantum defect parameters remain smoothly varying functions of energy for this system as in atomic applications, thus allowing us very coarse energy mesh calculations for the photodissociation spectra. The choice of adiabatic or diabatic potentials as reference potentials for the calculation of quantum defect parameters as done by Mies and Julienne [J. Chem. Phys., 80, 2526 (1984)] can not be used for this system. Physically motivated reference potentials that may be generally applicable to all kinds of systems are utilized instead. In principle, implementation can be done to any other predissociation processes with the same method.

• 한국생물물리학회:학술대회논문집
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• 한국생물물리학회 1999년도 학술발표회 진행표 및 논문초록
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• pp.38-38
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• 1999

Calculations on conformational free energies of Ac-Pro-NHMe and its $C^{\delta}$-methylated derivatives have been carried out with the higher levels of quantum-chemical methods to figure out the cis-trans isomerization of the imide bond of proline and $C^{\delta}$-methylated prolines in the gas phase and in solution.(omitted)hase and in solution.(omitted)

• 한국광물학회지
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• 제24권4호
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• pp.289-300
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• 2011

규산염 물질의 탄소 용해도에 대한 미시적 연구는 규산염 물질의 성질 변화와 지구 시스템 진화에 탄소가 미치는 영향의 이해에 매우 중요하다. 본 연구에서는 탄소가 용해된 엔스테타이트 시료에 대하여 라만(Raman) 분광분석을 실시하고, 양자 화학 계산을 통해 결정구조 내에 용해된 탄소의 원자 환경과 핵자기공명 분광 특성을 예측하였다. 1.5 GPa $1,400^{\circ}C$의 온도 압력 조건에서 2.4 wt%의 비정질 탄소와 함께 합성한 엔스테타이트의 라만 실험에서 엔스테타이트의 진동양상은 확인할 수 있었으나, $CO_2$나 탄산염 이온의 진동양상에 대한 정보는 획득하지 못하였다. 이는 엔스테타이트 내에 용해된 탄소의 양이 매우 적어 시료를 구성하는 원자들의 집합적인 진동양상을 측정하는 라만 분광분석으로는 검출이 어려움을 지시한다. 특정 핵종 중심의 핵자기공명 분광분석을 이용하면, 구조 내에 존재하는 탄소만 선택적으로 측정할 수 있다. 특히 $^{13}C$ NMR 화학 이동(chemical shift)은 원자 환경에 따라 민감하게 변하므로, 양자 화학 계산을 이용하여 $CO_2$와 C가 치환된 엔스테타이트 클러스터의 $^{13}C$ NMR 화학 차폐 텐서(chemical shielding tensor)를 계산하였다. 계산 결과 $CO_2$의 피크는 125 ppm에서 나타나며 이는 기존의 실험결과와 일치하며, 상압에서는 생성이 어렵지만 고압환경에서 생성될 가능성이 있는 배위수가 4인 C의 화학 이동 값은 ~254 ppm으로 예측되었다. 이와 같은 양자 화학 계산 결과는 고분해능 $^{13}C$ NMR 실험의 이해를 돕고 탄소의 원자 환경을 연구하는데 도움을 줄 것이다.

• 공업화학
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• 제33권4호
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• pp.425-430
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• 2022

L-alanine (LA, as an amino acid residue) pentamer model was used to investigate changes in the dihedral angle, intramolecular hydrogen bonding and formation energies during structural optimization. LA pentamers having four conformation types [𝛽: 𝜑/𝜓=t-/t+, 𝛼: 𝜑/𝜓=g-/g-, PP_II: 𝜑/𝜓=g-/t+ and P-like: 𝜑/𝜓= g-/g+] were carried out by quantum chemical calculations (QCC) [B3LYP/6-31G(d,p)]. In LA, 𝛽, 𝛼, and P-like types did not change by optimization, having an intra-molecular hydrogen bond: NH⋯OC (H-bond), and PP_II types in the absence of H-bond were transformed into P-like at the designated 𝜓 of 140°, and to 𝛽 at that of 160° or 175°. P-like and 𝛼 were about 0.5 kcal/mol/mu more stable than 𝛽. In order to understand the processes of the transformations, the changes of 𝜑/𝜓, distances of NH-OC (d_NH/CO) and formation energies (𝜟E, kcal/mol/mu) were examined.