• Title/Summary/Keyword: Quantitative parameters

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Estimation of Genetic Parameters for Serum Clinical-Chemical Traits in Korean Native Chickens

  • Park, Hee-Bok;Seo, Dong-Won;Choi, Nu-Ri;Choi, Jun-Seung;Heo, Kang-Nyeong;Kang, Bo-Seok;Jo, Cheorun;Lee, Jun-Heon
    • Korean Journal of Poultry Science
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    • v.39 no.4
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    • pp.279-282
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    • 2012
  • Clinical-chemical traits are commonly used biomarkers to examine the health status of individuals. There is an appreciable range of normal variation in most clinical-chemical traits and the determining factors of this variation have been relatively uninvestigated in chickens. The aim of this study was to estimate the genetic parameters (i.e., heritability, genetic correlation) for 8 clinical-chemical traits (glucose, total protein, creatinine, high-density lipoprotein cholesterol, total cholesterol, glutamic oxaloacetic transaminase, glutamic pyruvic transaminase and amylase) in an $F_1$ intercross established by purebred breeding among the 5 lines of Korean native chickens. Phenotypic data were collected from approximately 600 $F_1$ animals. The genetic parameters for the clinical-chemical traits estimated by a mixed animal model using the restricted maximum likelihood method were presented. Estimated heritabilities ranged from 8.9% (glucose) to 39.6% (high-density lipoprotein cholesterol). Interestingly, both the sign and the size of the genetic and phenotypic correlations were largely different between the same several pair of clinical-chemical traits. The findings in this study will provide useful information to address issues in both quantitative trait locus study and genetic management in Korean native chickens.

Multi-camera System Calibration with Built-in Relative Orientation Constraints (Part 2) Automation, Implementation, and Experimental Results

  • Lari, Zahra;Habib, Ayman;Mazaheri, Mehdi;Al-Durgham, Kaleel
    • Journal of the Korean Society of Surveying, Geodesy, Photogrammetry and Cartography
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    • v.32 no.3
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    • pp.205-216
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    • 2014
  • Multi-camera systems have been widely used as cost-effective tools for the collection of geospatial data for various applications. In order to fully achieve the potential accuracy of these systems for object space reconstruction, careful system calibration should be carried out prior to data collection. Since the structural integrity of the involved cameras' components and system mounting parameters cannot be guaranteed over time, multi-camera system should be frequently calibrated to confirm the stability of the estimated parameters. Therefore, automated techniques are needed to facilitate and speed up the system calibration procedure. The automation of the multi-camera system calibration approach, which was proposed in the first part of this paper, is contingent on the automated detection, localization, and identification of the object space signalized targets in the images. In this paper, the automation of the proposed camera calibration procedure through automatic target extraction and labelling approaches will be presented. The introduced automated system calibration procedure is then implemented for a newly-developed multi-camera system while considering the optimum configuration for the data collection. Experimental results from the implemented system calibration procedure are finally presented to verify the feasibility the proposed automated procedure. Qualitative and quantitative evaluation of the estimated system calibration parameters from two-calibration sessions is also presented to confirm the stability of the cameras' interior orientation and system mounting parameters.

RELATIONSHIPS OF THE SOLAR WIND PARAMETERS WITH THE MAGNETIC STORM MAGNITUDE AND THEIR ASSOCIATION WITH THE INTERPLANETARY SHOCK

  • OH SU YEON;YI YU
    • Journal of The Korean Astronomical Society
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    • v.37 no.4
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    • pp.151-157
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    • 2004
  • It is investigated quantitative relations between the magnetic storm magnitude and the solar wind parameters such as the Interplanetary Magnetic Field (hereinafter, IMF) magnitude (B), the southward component of IMF (Bz), and the dynamic pressure during the main phase of the magnetic storm with focus on the role of the interplanetary shock (hereinafter, IPS) in order to build the space weather fore-casting model in the future capable to predict the occurrence of the magnetic storm and its magnitude quantitatively. Total 113 moderate and intense magnetic storms and 189 forward IPSs are selected for four years from 1998 to 2001. The results agree with the general consensus that solar wind parameter, especially, Bz component in the shocked gas region plays the most important role in generating storms (Tsurutani and Gonzales, 1997). However, we found that the correlations between the solar wind parameters and the magnetic storm magnitude are higher in case the storm happens after the IPS passing than in case the storm occurs without any IPS influence. The correlation coefficients of B and $BZ_(min)$ are specially over 0.8 while the magnetic storms are driven by IPSs. Even though recently a Dst prediction model based on the real time solar wind data (Temerin and Li, 2002) is made, our correlation test results would be supplementary in estimating the prediction error of such kind of model and in improving the model by using the different fitting parameters in cases associated with IPS or not associated with IPS rather than single fitting parameter in the current model.

The Acoustic Severity Index in the Pathologic Voice (음성장애에 대한 음향학적 중등도 지표)

  • Hong, Ki-Hwan;Kim, Hyun-Ki;Yang, Yoon-Soo
    • Speech Sciences
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    • v.10 no.4
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    • pp.201-219
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    • 2003
  • Background: The perceptual assessment is generally performed by the voice specialist. The objective evaluation is performed in a voice laboratory. Research in voice laboratories has generated a variety of different objective tests and parameters. The perceptual evaluation is one of the most controversial topics in voice research. Review of literature reveals a wide variety of rating scales and reliability data fluctuating from study to study. Unfortunately, there is no widely accepted valid method for classifying voice disorders and assessing outcome after voice treatment. Objectives: The goals of this research were to identify important objective acoustic parameters of vocal quality, and to establish an objective and quantitative correlate of the perceived vocal quality. Materials and Methods : We evaluated the voice analyzed data from 122 dysphonic patients and 20 normal volunteers. A computerized speech lab. 4300B(CSL) was used to carry out the analysis of each voice sample. Results: Three dysphonia severity indices(DSI) were created using discriminant analysis. DSI is based on the weighted combination of the following selected set of acoustic parameters: absolute jitter(Jita in us), smoothed pitch period perturbation (sPPQ in %), amplitude perturbation quotient(APQ in %), soft phonation index(SPI), average fundamental frequency(Fo in Hz), lowest fundamental frequency(Flo in Hz), and smoothed amplitude perturbation quotient(sAPQ in %). The DSI, being the discriminating rule calculated by the logistic regression, consists of three equation based on statistically significant acoustic parameters. Three DSI were created to reflects best the degree of hoarseness as expressed by G from the GRBAS scale. The more positive this DSI is for a patient, the worse the vocal quality. The more it is negative, the better it is. The effect of sex is included implicitly in the DSI-1 and DSI-2, so that a separate DSI-1 and DSI-2 for males and females need not be used. The DSI is objective because no perceptual input is required for its calculation. Conculsion : This research demonstrates that the voice function values calculated from three different multivariate objective dysphonia severity indices are significantly associated with subjective voice assessments. These multivariate objective dysphonia severity indices may be appropriate for use in clinical trials and outcomes research on treatment effectiveness for voice disorders.

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Visual Explanation of a Deep Learning Solar Flare Forecast Model and Its Relationship to Physical Parameters

  • Yi, Kangwoo;Moon, Yong-Jae;Lim, Daye;Park, Eunsu;Lee, Harim
    • The Bulletin of The Korean Astronomical Society
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    • v.46 no.1
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    • pp.42.1-42.1
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    • 2021
  • In this study, we present a visual explanation of a deep learning solar flare forecast model and its relationship to physical parameters of solar active regions (ARs). For this, we use full-disk magnetograms at 00:00 UT from the Solar and Heliospheric Observatory/Michelson Doppler Imager and the Solar Dynamics Observatory/Helioseismic and Magnetic Imager, physical parameters from the Space-weather HMI Active Region Patch (SHARP), and Geostationary Operational Environmental Satellite X-ray flare data. Our deep learning flare forecast model based on the Convolutional Neural Network (CNN) predicts "Yes" or "No" for the daily occurrence of C-, M-, and X-class flares. We interpret the model using two CNN attribution methods (guided backpropagation and Gradient-weighted Class Activation Mapping [Grad-CAM]) that provide quantitative information on explaining the model. We find that our deep learning flare forecasting model is intimately related to AR physical properties that have also been distinguished in previous studies as holding significant predictive ability. Major results of this study are as follows. First, we successfully apply our deep learning models to the forecast of daily solar flare occurrence with TSS = 0.65, without any preprocessing to extract features from data. Second, using the attribution methods, we find that the polarity inversion line is an important feature for the deep learning flare forecasting model. Third, the ARs with high Grad-CAM values produce more flares than those with low Grad-CAM values. Fourth, nine SHARP parameters such as total unsigned vertical current, total unsigned current helicity, total unsigned flux, and total photospheric magnetic free energy density are well correlated with Grad-CAM values.

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Assessment of Diffusion Tensor Imaging Parameters of Hepatic Parenchyma for Differentiation of Biliary Atresia from Alagille Syndrome

  • Ahmed Abdel Khalek Abdel Razek;Ahmed Abdalla;Reda Elfar;Germeen Albair Ashmalla;Khadiga Ali;Tarik Barakat
    • Korean Journal of Radiology
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    • v.21 no.12
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    • pp.1367-1373
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    • 2020
  • Objective: To assess diffusion tensor imaging (DTI) parameters of the hepatic parenchyma for the differentiation of biliary atresia (BA) from Alagille syndrome (ALGS). Materials and Methods: This study included 32 infants with BA and 12 infants with ALGS groups who had undergone DTI. Fractional anisotropy (FA) and mean diffusivity (MD) of the liver were calculated twice by two separate readers and hepatic tissue was biopsied. Statistical analyses were performed to determine the mean values of the two groups. The optimum cut-off values for DTI differentiation of BA and ALGS were calculated by receiver operating characteristic (ROC) analysis. Results: The mean hepatic MD of BA (1.56 ± 0.20 and 1.63 ± 0.2 × 10-3 mm2/s) was significantly lower than that of ALGS (1.84 ± 0.04 and 1.79 ± 0.03 × 10-3 mm2/s) for both readers (r = 0.8, p = 0.001). Hepatic MD values of 1.77 and 1.79 × 10-3 mm2/s as a threshold for differentiating BA from ALGS showed accuracies of 82 and 79% and area under the curves (AUCs) of 0.90 and 0.91 for both readers, respectively. The mean hepatic FA of BA (0.34 ± 0.04 and 0.36 ± 0.04) was significantly higher (p = 0.01, 0.02) than that of ALGS (0.30 ± 0.06 and 0.31 ± 0.05) for both readers (r = 0.80, p = 0.001). FA values of 0.30 and 0.28 as a threshold for differentiating BA from ALGS showed accuracies of 75% and 82% and AUCs of 0.69 and 0.68 for both readers, respectively. Conclusion: Hepatic DTI parameters are promising quantitative imaging parameters for the detection of hepatic parenchymal changes in BA and ALGS and may be an additional noninvasive imaging tool for the differentiation of BA from ALGS.

A Study for the Distinction between Denervation Potentials and Endplate Spikes for the Diagnosis of Neuropathy (신경질환의 진단을 위한 탈신경 전위와 종판 전위의 구별에 관한 연구)

  • 임재중;김남균;황윤성;박인선
    • Journal of Biomedical Engineering Research
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    • v.20 no.4
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    • pp.451-459
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    • 1999
  • During the electromyographic evaluation for the diagnosis of neuropathy, presence for site of lesion could be predicted by a detection of denervation potentials such as fibrillation potentials or positive sharp waves in a group of muscles. Unfortunately, since denervation potentials are distinguished by examiner's experience, it is possible to make mistake identifying endplate spikes as a denervation potential. The aim of the study was to extract parameters to make an algorithm for quantitative distinction between denervation potentials and endplate spikes. It will help to minimize the examiner's bias and to localize the site of lesion thus increase the reliability on EMG diagnosis. There types of signals, endplate spike, fibrillation potential and positive sharp wave were obtained from the EDB(extensor digitorum brevis) muscle using then neuropathic patients. Eight parameters such as duration, area, slope, peak-to-peak amplitude, positive peak negative peak amplitude, ratio of positive to negative peak amplitude, and number of phase were extracted and compared. As a results, peak-to-peak amplitude, positive peak amplitude, ratio of positive to negative peak amplitude showed statistically significant differences between endplate spikes and denervation potentials. It was concluded that those parameters could be used to establish an algorithm which will improve the accuracies in automated quantitative EMG diagnosis.

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Evaluation of Tendency for Characteristics of MRI Brain T2 Weighted Images according to Changing NEX: MRiLab Simulation Study (자기공명영상장치의 뇌 T2 강조 영상에서 여기횟수 변화에 따른 영상 특성의 경향성 평가: MRiLab Simulation 연구)

  • Kim, Nam Young;Kim, Ju Hui;Lim, Jun;Kang, Seong-Hyeon;Lee, Youngjin
    • Journal of the Korean Society of Radiology
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    • v.15 no.1
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    • pp.9-14
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    • 2021
  • Recently, magnetic resonance imaging (MRI), which can acquire images with good contrast without exposure to radiation, has been widely used for diagnosis. However, noise that reduces the accuracy of diagnosis is essentially generated when acquiring the MR images, and by adjusting the parameters, the noise problem can be solved to obtain an image with excellent characteristics. Among the parameters, the number of excitation (NEX) can acquire images with excellent characteristics without additional degradation of image characteristics. In contrast, appropriate NEX setting is required since the scan time increases and motion artifacts may occur. Therefore, in this study, after fixing all MRI parameters through the MRiLab simulation program, we tried to evaluate the tendency of image characteristics according to changing NEX through quantitative evaluation of brain T2 weighted images acquired by adjusting only NEX. To evaluate the noise level and similarity of the acquired image, signal to noise ratio (SNR), contrast to noise ratio (CNR), root mean square error (RMSE) and peak signal to noise ratio (PSNR) were calculated. As a result, both noise level and similarity evaluation factors showed improved values as NEX increased, while the increasing width gradually decreased. In conclusion, we demonstrated that an appropriate NEX setting is important because an excessively large NEX does not affect image characteristics improvement and cause motion artifacts due to a long scan.

Usefulness of Bone SPECT/CT for Predicting Avascular Necrosis of the Femoral Head in Children with Slipped Capital Femoral Epiphysis or Femoral Neck Fracture

  • Yoo Sung Song;Won Woo Lee;Moon Seok Park;Nak Tscheol Kim;Ki Hyuk Sung
    • Korean Journal of Radiology
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    • v.23 no.2
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    • pp.264-270
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    • 2022
  • Objective: This study aimed to investigate the usefulness of bone single-positron emission tomography/computed tomography (SPECT/CT) of the hip in predicting the later occurrence of avascular necrosis (AVN) after slipped capital femoral epiphysis (SCFE) or femoral neck fracture in pediatric patients. The quantitative parameters of SPECT/CT useful in predicting AVN were identified. Materials and Methods: Twenty-one (male:female, 10:11) consecutive patients aged < 18 years (mean age ± standard deviation [SD], 11.0 ± 2.7 years) who underwent surgery for SCFE or femoral neck fracture and postoperative bone SPECT/CT were included. The maximum standardized uptake value (SUV), mean SUV, and minimum SUV of the femoral head were measured. The ratios of the maximum SUV, mean SUV, and minimum SUV of the affected femoral head to the contralateral side were determined. Patients were followed up for > 1 year after the surgery. The SPECT/CT parameters were compared between patients who developed AVN and those who did not. The accuracy of SPECT/CT parameters for predicting AVN was assessed. Results: Six patients developed AVN. There was a significant difference in the ratio of the mean SUV among patients who developed AVN (mean ± SD, 0.8 ± 0.3) and those who did not (1.1 ± 0.2, p = 0.018). However, there were no significant differences in the ratios of the maximum and minimum SUV between the groups (all p = 0.205). For the maximum, mean, and minimum SUVs, no significant differences were observed between the groups (p = 0.519, 0.733, and 0.470, respectively). The cutoff mean SUV ratio of 0.87 yielded a 66.7% sensitivity and 93.2% specificity for predicting AVN. Conclusion: Quantitative bone SPECT/CT is useful for evaluating femoral head viability in pediatric patients with SCFE or femoral neck fractures. Clinicians should consider the high possibility of later AVN development in patients with a decreased mean SUV ratio.

Chemotherapy-Related Cardiac Dysfunction: Quantitative Cardiac Magnetic Resonance Image Parameters and Their Prognostic Implications

  • Jinhee Kim;Yoo Jin Hong;Kyunghwa Han;Jin Young Kim;Hye-Jeong Lee;Jin Hur;Young Jin Kim;Byoung Wook Choi
    • Korean Journal of Radiology
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    • v.24 no.9
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    • pp.838-848
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    • 2023
  • Objective: To quantitatively analyze the cardiac magnetic resonance imaging (CMR) characteristics of chemotherapy-related cardiac dysfunction (CTRCD) and explore their prognostic value for major adverse cardiovascular events (MACE). Materials and Methods: A total of 145 patients (male:female = 76:69, mean age = 63.0 years) with cancer and heart failure who underwent CMR between January 2015 and January 2021 were included. CMR was performed using a 3T scanner (Siemens). Biventricular functions, native T1 T2, extracellular volume fraction (ECV) values, and late gadolinium enhancement (LGE) of the left ventricle (LV) were compared between those with and without CTRCD. These were compared between patients with mild-to-moderate CTRCD and those with severe CTRCD. Cox proportional hazard regression analysis was used to evaluate the association between the CMR parameters and MACE occurrence during follow-up in the CTRCD patients. Results: Among 145 patients, 61 had CTRCD and 84 did not have CTRCD. Native T1, ECV, and T2 were significantly higher in the CTRCD group (1336.9 ms, 32.5%, and 44.7 ms, respectively) than those in the non-CTRCD group (1303.4 ms, 30.5%, and 42.0 ms, respectively; P = 0.013, 0.010, and < 0.001, respectively). They were not significantly different between patients with mild-to-moderate and severe CTRCD. Indexed LV mass was significantly smaller in the CTRCD group (65.0 g/m2 vs. 78.9 g/mm2; P < 0.001). According to the multivariable Cox regression analysis, T2 (hazard ratio [HR]: 1.14, 95% confidence interval [CI]: 1.01-1.27; P = 0.028) and quantified LGE (HR: 1.07, 95% CI: 1.01-1.13; P = 0.021) were independently associated with MACE in the CTRCD patients. Conclusion: Quantitative parameters from CMR have the potential to evaluate myocardial changes in CTRCD. Increased T2 with reduced LV mass was demonstrated in CTRCD patients even before the development of severe cardiac dysfunction. T2 and quantified LGE may be independent prognostic factors for MACE in patients with CTRCD.