• Title/Summary/Keyword: Pseudomonas sp

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Cloning and Nucleotide Sequence Analysis of xylC Gene Encoding 5C-2HMS Dehydrogenase from Pseudomonas sp. S-47. (Pseudomonas sp. S-47로부터 5-Chloro-2-Hydroxymuconic Semialdehyde Dehydrogenase를 암호화하는 xylG 유전자의 클로닝 및 염기서열 분석)

  • Park, Song-Yi;Lee, Dong-Hoon;Kim, Young-Soo;Lee, Kyung;Kim, Chi-Kyung
    • Microbiology and Biotechnology Letters
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    • v.30 no.1
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    • pp.8-14
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    • 2002
  • Pseudomonas sp. S-47 is capable of degrading 4-chlorobenzoate to produce 5-chloro-2-hydroxymuconic semialdehyde (5C-2HMS) by the enzymes encoding by xylXYZLTE cluster. In this study, the resulting 5C-2HMS was confirmed to be transformed to 5-chloro-2-hydroxymuconic acid (5C-2HMA) by 5C-2HMS dehydrogenase. The xylG gene encoding 5C-2HMS dehydrogenase was cloned from the chromosomal DNA of strain S-47. The nucleotide sequence of xylG showed to be composed of 1,600 base pairs with ATG initiation and TGA termination codons. A deduced amino acid sequence of the 5C-2HMS dehydrogenase (XylG) exhibited 98%, 93%, and 89% identity with those of the dehydrogenases from P. putida mt-2, P. putida G7, and Pseudomonas sp. CF600, respectively.

Characteristics of a Marine Agarolytic Pseudomonas sp. from Porphyra dentata(Bangiales, Rhodophyta) and Some Properties of its Extracellular Agarase (김(Porphyra dentata) 병반조직에서 분리한 해양미생물의 특성과 생산된 체외 한천분해효소 특성)

  • 박상렬;조수정;김민근;임우진;류성기;안창룡;홍수영;이영한;김범규
    • Journal of Life Science
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    • v.11 no.4
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    • pp.291-297
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    • 2001
  • The marine bacterium isolated from Porphyra dentata showing green spot rot disease was identified as Pseudomonas sp. the strain have CNCase activity, xylanase activity and protease activity as well as agarase activity. But the strain has no pectate lyase activity. Porphyra dentata tissue inoculated this isolate was macerated after 1 week incubation. The characteristics of extracellular crude agarase of this isolate were examined, the optimal pH and temperature were pH7 and 3$0^{\circ}C$, respectively.

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Production of Glutamic Acid by Pseudomonas sp. L-10 (Pseudomonas sp. L-10에 의한 글루탐산의 생산)

  • 이종수;안용근
    • The Korean Journal of Food And Nutrition
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    • v.8 no.4
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    • pp.275-279
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    • 1995
  • A bacterium L-10 which produce mush of glutamic acid was Isolated from soil and identified as the genus Pserdomonas. The maximal glutamic acid production was obtained when the strain was cultured at 3$0^{\circ}C$ for 30 hrs in the optimal medium containing 5% glucose, 0.5% each of urea and yeast extract, 0.1% K2HP04, 0.02% MgSO4.7H20, 0.3% (NH, )rHP04, 0.5ug/l biotin and Initial pH 7.0, and then final glutamic acid production under the above conditions was 1.2mg/ml of cell cultures.

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Cloning and Characterization of GL-7-ACA Acylase Gene from Pseudomonas sp. GK16

  • LEE, YOUNG-SIK;HAN-CHUL YANG;SUNG-SOO PARK
    • Journal of Microbiology and Biotechnology
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    • v.6 no.6
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    • pp.375-380
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    • 1996
  • The gene coding for glutaryl-7-aminocephalosporanic acid (GL-7-ACA) acylase was cloned from Pseudomonas sp. GK16 and some of its characteristics were analyzed. The complete nucleotide sequence revealed that the putative open reading frame is 2160 bases long and encodes 720 amino acids. By SDS-PAGE three proteins, approximately corresponding to 70, 54 and 16 kDa of molecular weight, were detected in E. coli cells carrying pGAP18. The largest protein should be a precursor which is not processed yet, while the other two proteins must be derived from the precursor by the proteolytic processing.

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Treatment of Polyester Weight Loss Wastewater Using Strains Degrading Ethylene Glycol and Terephthalic Acid (Ethylene Glycol과 Terephthalic Acid 분해균주를 이용한 감량가공폐수처리)

  • 서승교
    • Journal of Environmental Health Sciences
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    • v.27 no.3
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    • pp.43-48
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    • 2001
  • Terephthalic acid and ethylene glycol resulting form the weight-reduction process of polyester make trouble in the operation of activated sludge process. Also, polyester weight loss wastewater shows high pH, high organic strength and wide variation of organic loading. Therefore, this study was conducted in order to improve treatment efficiency by activated sludge process with Pseudomonas sp degrading components of polyester weight loss wastewater. The CO $D_{Mn}$ and BO $S_{5}$ of the waste wastewater were 560~3,000 mg/$\ell$ and 8000~3,000 mg/$\ell$, respectively. pH was 11.8~12.3. COD removal efficiency by activated sludge-coagulation process with Pseudomonas sp was 94.1~95.8% for 35 hr of hydraulic retention time. Total organic carbon removal efficiency was 97.1%. Ethylene glycol and terephthalic acid in the wastewater were completely degraded during 32 hr of hydraulic retention time.e.

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Alginate Lyase Production of Halophilic Pseudomonas sp. by Recombinant Escherichia coli

  • Kong, In-Soo;Kim, Young-Ok;Kim, Jin-Man;Kim, Sung-Koo;Oh, Doo-Hwan;Yu, Ju-Hyun;Kong, Jal-Yul
    • Journal of Microbiology and Biotechnology
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    • v.5 no.2
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    • pp.92-95
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    • 1995
  • Halophilic Pseudomonas sp.W7 isolated from laver in the southem sea of Korea showed alginate lyase activity. Gene (aly) encoding alginate lyase was cloned in E.coli JM83 and the N-terminal amino acid sequence of the enzyme was determined after purificaion. The recombinant enzyme has been shown to have a molecular weight of about 40kDa after 12% SDS-polyacrylamide gel electrophoresis.

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Effect of Culture Conditions on Cathepsin B Inhibitor Production by a Marine Bacterium, Pseudomonas sp. Strain PB01

  • Hoang, Le Thu Van;Kim, Moon-Moo;Kim, Se-Kwon
    • Journal of Microbiology and Biotechnology
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    • v.18 no.6
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    • pp.1115-1120
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    • 2008
  • A novel cathepsin B inhibitor-producing bacterium was isolated from marine sediments and identified based on its 16S rDNA sequence as Pseudomonas sp. strain PB01 (Accession No. EU126129). The growth and enzyme inhibitor production were investigated under various culture conditions. A mixture of organic nitrogen source was required for the optimal production, whereas both glucose and maltose proved to be the effective carbon sources for cathepsin B inhibitor production. Other optimal culture conditions included temperature range between 25 and $28^{\circ}C$, initial medium pH of 6.6, and shaking speed of 200 rpm. Under these optimal conditions, the maximum inhibitory activity from culture broth was approximately 50% after 30 h of cultivation. Additionally, kinetic study revealed that inhibitor production paralleled with cell growth, which suggested that the inhibitor may be a primary metabolite of that bacterium.

Optical Resolution of DL-Pipecolic Acid by Fermentation Using Pseudomonas sp. PA09

  • Kim, Chan-Soo;Lee, Il-Seok;Chung, Nam-Hyun;Bang, Won-Gi
    • Journal of Microbiology and Biotechnology
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    • v.11 no.2
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    • pp.217-221
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    • 2001
  • Pseudomonas sp. PA09 was isolated from farm soil and used for the optical resolution of D-pipecolic acid from DL-popecolic acid. The strain PA09 consumed L-pipecolic acid preferentially as the sole carbon and energy source, thus accumulating D-pipecolic acid in the culture broth. Optimization to improve the enantiomeric excess and yield was performed. The time course experiment showed that the strain OP09 consumed L-pipecolic acid almost to completion after 35h of cultivation, and the enantiomeric excess and the yield (% of residual D-pipecolic acid) were 99.8 and 96.0%, respectively.

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Enhanced stability of Pseudomonas sp. Endo-1,4-$\beta$$\beta$-1,4-Glucosidase Gene (Pseudomonas sp. 유래 Endo-1,4-$\beta$-Glucanase 및$\beta$-1,4-Glucosidase 유전자의 안정성 개선)

  • Kim, Yang-Woo;Chun, Sung-Sik;Chung, Young-Chul;Roh, Jong-Soo;Sung, Nack-Kie
    • Microbiology and Biotechnology Letters
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    • v.23 no.6
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    • pp.659-664
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    • 1995
  • To improve stability of recombinant DNA pLC1 encoding endoglucanase gene and pGL1 encoding $\beta $-glucosidase gene, DNA fragments of genes coding endoglucanase and $\beta $-glucosidase were cloned within the recA gene on a pDR1453, and the pDRE10 and pDRG20 of recombinant plasmids were integrated into the recA gene on the E. coli 1100 chromosomal DNAs. The stability of inheritance was completely maintained in E. coli 1100; Transformants E. coli 1100/pDREIO and pDRG20 were expressed well by recA promoter and increased endoglucanase and $\beta $-glucosidase activities. This method can be used as a model to improve the stability of recombinant plasmid in large scale culture.

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Pseudomonas sp. Strain DJ77에서 Rieske-Type의 Ferredoxin을 암호화하는 phnR 유전자의 구조

  • Kim, Sungje;Park, Yong-Chjun;Kim, Chi-Kyung;Lim, Jai-Yun;Lee, Ki-Sung;Min, Kyung-Hee;Kim, Young-Chang
    • Microbiology and Biotechnology Letters
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    • v.25 no.4
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    • pp.367-373
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    • 1997
  • One of the three components of the phenanthrene dioxygenase which is required for conversion of phenanthrene to cis-phenanthrene dihydrodiol, Rieske-type ferredoxin encoded by phnR has been cloned and sequenced from Pseudomonas sp. strain DJ77. The gene phnR is positioned at the downstream of phnQ encoding 2,3-dihydroxybiphenyl 1,2-dioxygenase. The PhnR ferredoxin contains 108 amino acids with a Mr of 11,355. The deduced amino acid sequence of the PhnR ferredoxin is 35-79% identical to those of homologous ferredoxins encoded by various genes.

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