• Title/Summary/Keyword: Population parameters

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Genetic Relationships among Australian and Mongolian Fleece-bearing Goats

  • Bolormaa, S.;Ruvinsky, A.;Walkden-Brown, S.;van der Werf, J.
    • Asian-Australasian Journal of Animal Sciences
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    • v.21 no.11
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    • pp.1535-1543
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    • 2008
  • Microsatellites (MS) are useful for quantifying genetic variation within and between populations and for describing the evolutionary relationships of closely related populations. The main objectives of this work were to estimate genetic parameters, measure genetic distances and reconstruct phylogenetic relationships between Australian Angora/Angora_Aus/ and Cashmere/Cashmere_Aus/ populations and three Mongolian Cashmere goat (Bayandelger/BD/, Zavkhan Buural/ZB/, and Gobi Gurvan Saikhan/GGS/) populations based on variation at fourteen MS loci. The level and pattern of observed and expected heterozygosity and polymorphic information content of the fourteen loci studied across the populations were quite similar and high. Except for SRCRSP07, all studied microsatellites were in Hardy-Weinberg Equilibrium (p<0.001). Moderate genetic variation (7.5%) was found between the five goat populations with 92.5% of total genetic variation attributable to diversity existing between the individuals within each population. The greatest Nei's genetic distances were found between the Angora and four Cashmere populations (0.201-0.276) and the lowest distances were between the Mongolian Cashmere goat populations (0.026-0.031). Compared with other Cashmere goat populations, the GGS (crossbred with Russian Don Goats) population had the smallest pairwise genetic distance from the Australian Angora population (0.192). According to a three-factorial correspondence analysis (CA), the three different Mongolian Cashmere populations could hardly be distinguished from each other.

Population Ecology of Blackthroat Seaperch Doederleinia berycoides in the Southern Seas of Korea (한국 남해 연안에 분포하는 눈볼대(Doederleinia berycoides)의 자원생태학적 특성치)

  • Choi, Jung Hwa;Choi, Seung Hee;Lee, Dong Woo;Ryu, Dong Ki
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.47 no.6
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    • pp.901-907
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    • 2014
  • We investigated the population ecology of blackthroat seaperch, Doederleinia berycoides, from samples collected in the southern seas of Korea from January to December, 2006. Population ecological parameters included survival rate, the instantaneous coefficient of natural and fishing mortality, and age at first capture. The survival rate (S) of blackthroat seaperch was estimated as 0.4966 using the catch curve method. The instantaneous coefficient of total mortality (Z) was 0.8598/year. The instantaneous coefficient of natural mortality (M) was estimated as 0.4694/year. From the estimates of Z and M, the instantaneous coefficient of fishing mortality (F) was calculated as 0.3904/year. The age at first capture ($t_c$), based on the Pauly method, was 2.87 years.

Growth and Maturation of Natural Population of Meristotheca papulosa in Jeju Island (제주도 유용 해조류 갈래곰보(Meristotheca papulosa) 야외개체군의 생장과 성숙)

  • Kim, Bo Yeon;Choi, Han Gil;Ko, Jun-Cheol
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.52 no.1
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    • pp.59-66
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    • 2019
  • The growth and maturation pattern of a commercial and endemic red algae Meristotheca papulosa were investigated in Jeju Island. Ecological researches were performed in a natural population of 10 m water depth in Sinheung from march 2014 to November 2015. Maximal blade length and weight of M. papulosa were 8.7 cm and 5.49 g in July 2014 and 10.7 cm and 10.17 g in September 2015, respectively. Growth in blade area of the species reached a maximum of $43.84cm^2$ and $67.41cm^2$ in July 2014 and 2015, respectively. Thalli in the field population were rarely observed from October to December but new recruits were found from January, following year. Carposporophytes were observed from June to September when bottom seawater temperatures were around $20^{\circ}C$. At the study site, seawater temperature was in the range of $14.9-25.7^{\circ}C$. Growth parameters of M. papulosa and relative abundance of carposporophytes showed significant correlation with environmental factors (temperature, salinity, DIN). In this result, we clarified the growth and maturation period of M. palpulosa, and provided effective data on the protection and management of natural populations and basic data for mass culture of the alga.

Effects of Climate-Changes on Patterns of Seasonal Changes in Bird Population in Rice Fields using a Prey-Predator Model (포식자-피식자 모델을 이용하여 기후변화가 논습지를 이용하는 조류 개체군 동태에 미치는 영향 예측)

  • Lee, Who-Seung
    • Korean Journal of Environmental Agriculture
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    • v.32 no.4
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    • pp.294-303
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    • 2013
  • BACKGROUND: It is well known that rice-fields can provide excellent foraging places for birds including seasonal migrants, wintering, and breeding and hence the high biodiversity of rice-fields may be expected. However, how environmental change including climate-changes on life-history and population dynamics in birds on rice-fields has not been fully understood. In order to investigate how climate-change affects population migratory patterns and migration timing, I modeled a population dynamics of birds in rice-fields over a whole year. METHODS AND RESULTS: I applied the Lotka-Volterra equation to model the population dynamics of birds that have been foraging/visiting rice-fields in Korea. The simple model involves the number of interspecific individuals and temperature, and the model parameters are periodic in time as the biological activities related to the migration, wintering and reproduction are seasonal. As results, firstly there was a positive relationship between the variation of seasonal population sizes and temperature change. Secondly, the reduced lengths of season were negatively related to the population size. Overall, the effects of the difference of lengths of season on seasonal population dynamics were higher than the effects of seasonal temperature change. CONCLUSION(S): Climate change can alter population dynamics of birds in rice-fields and hence the variation may affect the fitness, such as reproduction, survival and migration. The unstable balances of population dynamics in birds using paddy rice field as affected by climate change can reduce the population growth and species diversity in rice fields. The results suggest that the agricultural production is partly affected by the unstable balance of population in birds using rice-fields.

Two Sample Tests in the Weibull Distribution

  • Park, Won-Joon
    • Journal of the Korean Statistical Society
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    • v.8 no.2
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    • pp.99-105
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    • 1979
  • In Thoman and Bain and Schafer and Sheffield, procedures for testing the equality of the scale parameters of two Weibull populations with a common shape parameter and procedures for selecting the Weibull population with the largest scale parameter are given. We give, in this paper, a modified procedure for the above testing and selection problems, which is more powerful than those previoulsy given.

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A Cumulative Logit Mixed Model for Ordered Response Data

  • Choi, Jae-Sung
    • Journal of the Korean Data and Information Science Society
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    • v.17 no.1
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    • pp.123-130
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    • 2006
  • This paper discusses about how to build up a mixed-effects model using cumulative logits when some factors are fixed and others are random. Location effects are considered as random effects by choosing them randomly from a population of locations. Estimation procedure for the unknown parameters in a suggested model is also discussed by an illustrated example.

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Parameter Estimation From Singly Censored Normal Sample (관측중단된 정규표본으로부터의 모수추정에 관한 연구)

  • Gwon, Yeong-Il
    • Journal of Korean Society for Quality Management
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    • v.15 no.2
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    • pp.61-68
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    • 1987
  • This paper considers the estimation of the parameters of a normal population from which a sample which has been censored at a known point is obtained. Simple estimators are presented which are given in closed forms. It is shown that maximum likelihood estimators are obtained by using the estimation procedure iteratively. Some computer simulation results are given.

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Application of the QUAL2Kw model to a Polluted River for Automatic Calibration and Sensitivity Analysis of Genetic Algorithm Parameters (오염하천의 자동보정을 위한 QUAL2Kw 모형의 적용과 유전알고리즘의 매개변수에 관한 민감도분석)

  • Cho, Jae-Heon
    • Journal of Environmental Impact Assessment
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    • v.20 no.3
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    • pp.357-365
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    • 2011
  • The QUAL2K has the same basic characteristics as the QUAL2E model, which has been widely used in stream water quality modeling; in QUAL2K, however, various functions are supplemented. The QUAL2Kw model uses a genetic algorithm(GA) for automatic calibration of QUAL2K, and it can search for optimum water quality parameters efficiently using the calculation results of the model. The QUAL2Kw model was applied to the Gangneung Namdaecheon River on the east side of the Korean Peninsula. Because of the effluents from the urban area, the middle and lower parts of the river are more polluted than the upper parts. Moreover, the hydraulic characteristics differ between the lower and upper parts of rivers. Thus, the river reaches were divided into seven parts, auto-calibration for the multiple reaches was performed using the function of the user-defined automatic calibration of the rates worksheets. Because GA parameters affect the optimal solution of the model, the impact of the GA parameters used in QUAL2Kw on the fitness of the model was analyzed. Sensitivity analysis of various factors, such as population size, crossover probability, crossover mode, strategy for mutation and elitism, mutation rate, and reproduction plan, were performed. Using the results of this sensitivity analysis, the optimum GA parameters were selected to achieve the best fitness value.

Optimal Design of Water Distribution Networks using the Genetic Algorithms:(II) -Sensitivity Analysis- (Genetic Algorithm을 이용한 상수관망의 최적설계: (II) -민감도 분석을 중심으로-)

  • Shin, Hyun-Gon;Park, Heekyun
    • Journal of Korean Society of Water and Wastewater
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    • v.12 no.2
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    • pp.50-58
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    • 1998
  • Genetic Algorithm (GA) consists of selection, reproduction, crossover and mutation processes and many parameters including population size, generation number, the probability of crossover (Pc) and the probability of mutation (Pm). Determining values of the parameters is found critical in the whole optimization process and a sensitivity analysis with them seems mandatory. This paper tries to demonstrate such importance of sensitivity analysis of GA using an example water supply tunnel network of the New York City. For optimization of the network with GA, Pc and Pm vary from 0.5 to 0.9 by an increment of 0.1 and from 0.01 to 0.05 by an increment of 0.01, respectively, while fixing both the population size and the generation number to 100. This sensitivity analysis results in an optimum design of 22.3879 million dollars at the values of 0.8 and 0.01 for Pc and Pm, respectively. In addition, the probability of recombination (Pr) is introduced to check its applicability in the GA optimization of water distribution network. When Pr is 0.05 with the same values of Pc and Pm as above, the optimum design costs 20.9077 million dollars. This is lower than the cost of 22.3879 million dollars for the case of not using Pr by 6.6%. These results indicate that conducting a sensitivity analysis with parameter values and using Pr are useful in the optimization of WDN.

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