• Bulletin of the Korean Chemical Society
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• 제31권6호
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• pp.1519-1526
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• 2010

The behavior of peptide or protein solutes in saline aqueous solution is a fundamental topic in physical chemistry. Addition of ions can strongly alter the thermodynamic and physical properties of peptide molecules in solution. In order to study the effects of added ionic salts on protein conformation and dynamics, we have used the molecular dynamics (MD) simulations to investigate the behavior of Staphylococcus aureus Hfq protein under two different ionic concentrations: 0.1 M NaCl and 1.0 M NaCl in presence and absence of RNA (a hepta-oligoribonucleotide AU5G). Hfq, a global regulator of gene expression is highly conserved and abundant RNA-binding protein. It is already reported that in vivo the increase of ionic strength results in a drastic reduction of Hfq affinity for $Q{\beta}$ RNA and reduces the tendency of aggregation of Escherichia coli host factor hexamers. Our results revealed the crucial role of 0.1 M NaCl Hfq system on the bases with strong hydrogen bonding interactions and by stabilizing the aromatic stacking of Tyr42 residue of the adjacent subunits/monomers with the adenine and uridine nucleobases. An increase in RNA pore diameter and weakened compactness of the Hfq-RNA complex was clearly observed in 1.0 M NaCl Hfq system with bound RNA. Aggregation of monomers in Hfq and the interaction of Hfq with RNA are greatly affected due to the presence of high ionic strength. Higher the ionic concentration, weaker is the aggregation and interaction. Our results were compatible with the experimental data and this is the first theoretical report for the experimental study done in 1980 by Uhlenbeck group for the present system.

• 한국환경농학회지
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• 제11권1호
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• pp.50-58
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• 1992

대기오염의 주원인 오존이 식물이 미체는 피해를 경감시키고자 생장왜화제인 uniconazole를 0, 0.001, 0.01, 0.1mg/pot의 농도로 토양주입하고 다시 antiethylene제인 STS를 0, 0.3, 0.6mM로 엽면살포 한 후 0.2ppm의 오존에 20시간 계속하여 처리하였던 바 다음과 같은 결과를 얻었다. 1 Uniconazole은 식물체의 왜화정도가 클수록 오존에 대한 내성을 증대시켜 무처리구의 36% 피해에 비하여 11%까지 피해를 감소시킬 수 있었다. STS 처리도 uniconazole과 같은 정도의 피해감소를 보였으며 두 약제를 복합처리한 결과 단독처리 보다 낮은 농도의 처리로도 오존에 대한 내성을 증대시킬 수 있었다. 2. Uniconazole은 토마토의 초장 및 엽장을 감소시키고 chlorophyll함량을 증대시켰으며 증산량을 현저히 감소시켰으나, STS는 생장에는 영향을 미치지 않고 증산량을 다소 증가시켰다. 오존처리는 증산량을 현저히 감소시켰으며 uniconazole은 오존에 의한 증산량의 감소를 막아 주었으나 STS처리는 감소효과가 없었다. 3. Uniconazole과 STS는 모두 오존피해로 유발되는 ethylene의 발생량을 크게 경감시켰다. 그러나 uniconazole은 오존피해로 일어나는 자엽의 낙엽 및 잎의 epinasty증상을 방지시킬 수 없었는데 반하여 STS처리에서는 자엽의 낙엽과 epinasty현상을 뚜렷하게 막아 주었다. 4. SOD와 POD의 활성은 uniconazole에 의하여 약간 증가되었으나 STS는 두가지 효소의 활성변화에 별다른 영향을 미치지 않았다. 5. STS의 처리는 토마토의 개화를 3일 정도 촉진시켰고 uniconazole는 6-8일 정도 촉진시켰으며 두 약제 모두 착과율을 증진시켰다. 두 약제를 복합처리함으로써 오존피해로 인한 착과의 감소를 완전하게 막을 수 있었다. 6. 이상의 결과로 보아 uniconazole은 식물체를 왜화시킴으로 오존에 대한 내성을 증대시켜주는 효과가 큰데 비하여 STS는 주로 피해로 인하여 유발되는 ethylene의 작용을 억제함으로써 내성을 증대시키는 것으로 판단된다. 따라서 두 약제의 복합사용은 식물체의 왜화를 최소한으로 유도하면서 오존에 대한 내성을 증대시킬 수 있는 유용한 방법이라 생각된다.

• Natural Product Sciences
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• 제11권4호
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• pp.233-239
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• 2005

The aerial parts of Gomphocarpus sinaicus Boiss. yielded four flavonoids that were identified as isorhamnetin 3-O-rhamnoglucoside (1), luteolin-7-O-glucoside-3-O-rhamnoside (2), rutin (3) and rutin-7-O-rhamnoside (4). All of the isolated flavonoids were identified by spectroscopic methods (UV, FAB-MS, $^1H-NMR\;&\;^{13}C-NMR$) and in comparison with the literature data. The isolated flavonoids 1, 2 and 4 are reported here for the first time from Gomphocarpus sinaicus Boiss. Three sets of experiments were carried out using the defatted alcoholic extract of Gomphocarpus sinaicus Boiss: the $1^{st}$ experiment indicated that the $LD_{50}$ was 49.82 mg/100 g b.wt. of intraperitoneally (i.p.) injected mice. The toxic signs were recorded within the first 24 hr post-injection. The $2^{nd}$ experiment revealed that the extract of the plant exhibited significant anti-inflammatory effects in normal rats. The $3^{rd}$ experiment was found that the tested doses of the extract in diabetic rats induced a significant decrease in serum glucose, AST, ALT, triglycerides, cholesterol and LDL, while HDL caused a significant increase.

• Archives of Pharmacal Research
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• 제25권5호
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• pp.628-635
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• 2002

Five terpenes (1~5), three fatty acids (6~8), two sterols (9 and 11), and a monogalactosyldiacyl glycerol (10) were isolated from the methylene chloride extract of the aerial part of Cirsium setidens. Their chemical structures were determined to be $\alpha$-tocopherol (1), 25-hydroperoxycycloart-23-en-3$\beta$-o1 (2), 24-hydroperoxycycloart-25-en-3$\beta$-o1 (3), mokko lactone (4), transphytol (5), 9, 12, 15-octadecatrienoic acid (6), 9, 12-octadecadienoic acid (7), hexadecanoic acid (8), acylglycosyl $\beta$-sitosterol (9), (2R)-1, 2-O-(9z, 12z, 15z-dioctadecatrienoyl)-3-O-$\beta$-D-galactopyranosyl glycerol (10) and $\beta$-sitosterol glucoside (11) by spectral evidences. Compound 3 exhibited significant cytotoxic activity against five human cancer cell lines with its $ED_{50}$ values ranging from 2.66 to 11.25 $\mu$M.

• 현장농수산연구지
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• 제19권1호
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• pp.91-97
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• 2017

This study was carried out to establish a proper cultivation site and to diagnose the drought tolerance of Heracleum moellendorffii leaves by using pressure-volume curves. As a result of analysing data measured, the leaf of H. moellendorffii showed the osmotic pressure at full turgor (Ψ_o^sat) was -1.0MPa, and that at incipient plasmolysis (Ψ_o^tlp) -1.2MPa. Then, the value of maximum bulk modulus of elasticity Emax was 28MPa, showing the sightly strong drought tolerance of H. moellendorffii. Furthermore, the values of relative water contents RWC^tlp and RWC^* were above 88%, showing that the function of osmoregulation is somewhat better. Thus, responses to water relations such as Ψ_o^sat, Ψ_o^tlp, E_max, RWC^tlp and RWC^* of H. moellendorffii showed it's slightly high drought tolerance property.

• Journal of Applied Biological Chemistry
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• 제50권4호
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• pp.227-233
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• 2007

We characterized a full-length cDNA of CaCOP1 from pepper. Phylogenetic analysis based on the deduced amino acid sequence of CaCOP1 cDNA revealed high sequence similarity to the COP1 gene in Oryza sativa (84% identity). CaCOP1 shares high sequence identity with regulatory protein in Arabidopsis (84%), constitutively photomorphogenic 1 protein in Pisum sativum (81%) and COP1 homolog in Lycopersicon esculentum (79%). CaCOP1 gene exists single copy in the chili pepper genome. Expression of CaCOP1 was reduced in response to inoculation of non-host pathogens. The expression of this gene under abiotic and oxidative stresses was investigated, including 200 mM NaCl, 200 mM mannitol, cold ($4^{\circ}C$), 100 ${\mu}M$ abscisic acid (ABA), and 10 mM hydrogen peroxide ($H_2O_2$). CaCOP1 was induced significantly 3 h after low temperature treatment but not by dehydration or high salinity. Moreover, CaCOP1 was not induced by plant hormone ABA. These observations suggest that CaCOP1 gene plays a role in abiotic stress and may be belong to ABA-independent regulation system.

• Journal of Ginseng Research
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• 제9권2호
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• pp.154-162
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• 1985

We report a newassay method on the measurement of the catalase activity, whose utilzation value is considered to be remarkable in the field of plant biochemistry. We named this method as a De-Coupling method. The essence of de-coupling method is the separation between the enzyme reaction and the indicator reaction. The optimum condition of the enzyme reaction was found to be following: on addition of 1 ml of substrate (H2O2: 20mM) to the fixture of the crude extract of enzyme (volume: 0.2 ml) and the ammonium phosphate buffer (volume: 1.8 ml; 0.93 M phosphate, 1.6M NHB, 2.5 M methanol, pH 7.0). After 30, 60 and 90 seconds of the enzyme reactions are proceeded, the reactions are terminated by 25% of tai-chloro-acetate (final concentration of 5%), respectively. The precipitated materials by tai-chloro-acetate was removed by the centrifugation (2000g, 10minutes). Formaldehyde produced in the enzymatic reaction was reacted with 2ml of acetylacetone (60mM). The indicator reaction -(HANTSCH REAKT10N)- in which lutidine is formed, was proceeded for 60 minutes at $25^{\circ}C$.

• 한국환경과학회지
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• 제22권10호
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• pp.1295-1304
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• 2013

This study was carried out to evaluate the physicochemical properties and perform a feasibility analysis of planting material composed of topsoil from river improvement and non-improvement areas. The results showed that the physicochemical properties of topsoil from river improvement areas were on the average sandy loam~loamy sand in soil texture, 5.6~6.8 in pH, 0.01~0.06 dS/m in EC, 0.9~2.1% in OM, 0.02~0.12% in T-N, 8~14 $cmol^+/kg$ in CEC, 0.01~0.08 $cmol^+/kg$ in Ex. $K^+$, 2.55~11.11 $cmol^+/kg$ in Ex. $Ca^{2+}$, 0.34~2.06 $cmol^+/kg$ in Ex. $Mg^{2+}$, and 3~396 mg/kg in Av. $P_2O_5$. And non-improvement areas showed on average sandy clay loam~sand in soil texture, 5.7~6.7 in pH, 0.02~0.08 dS/m in EC, 0.9~4.4% in OM, 0.02~0.23% in T-N, 7~18 $cmol^+/kg$ in CEC, 0.01~0.08 $cmol^+/kg$ in Ex. $K^+$, 3.81~12.67 $cmol^+/kg$ in Ex. $Ca^{2+}$, 0.60~1.95 $cmol^+/kg$ in Ex. $Mg^{2+}$, and 3~171 mg/kg in Av. $P_2O_5$. Meanwhile, the results of an applied valuation of topsoil- based planting were as follows. Ex. $K^+$ levels were low grade in all survey areas. OM was low grade in 12 improvement areas and 11 non-improvement areas. Av. $P_2O_5$ levels were low grade in 10 improvement areas and 10 non-improvement areas. T-N was low grade in six improvement areas and four non-improvement areas. Ex. $Mg^{2+}$ levels were low grade in two improvement areas.

• 한국자원식물학회:학술대회논문집
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• 한국자원식물학회 2019년도 추계학술대회
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• pp.27-27
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• 2019

본 연구는 멸종위기 아고산수종 구상나무의 보존 복원을 위한 유전다양성을 고려한 표본추출전략을 구명하는데 그 목적이 있다. 2019년 9월에 한라산 영실 집단($14,000m^2$)에서 총 152개체를 대상으로 선발된 10개의 nSSR 마커를 이용하여 유전다양성 및 공간적 유전구조를 분석하였다. 평균 유전다양성은 관찰된 대립유전자수(A)가 7.2개, 유효대립유전자수($A_e$)가 3.6개, 이형접합도 관찰치($H_o$)가 0.528, 이형접합도 기대치($H_e$)가 0.595이며, 고정지수(F)는 0.071 이었다. 조사구내 구상나무 성목 152개체는 평균 수고 3.6 m, 흉고직경 17.3 cm로 나타났다. 구상나무의 개체목간 평균거리는 3.94 m, 임분밀도는 700 본/ha 이며 개체의 공간적 분포는 임의분포 형태로 나타났다. 구상나무의 유전변이에 대한 공간적 자기상관성(spatial autocorrelation) 분석 결과, 조사구의 구상나무는 약 15 m 이내에서 분포하는 개체들 간 유전적 유사성이 있게 분포하는 것으로 나타났으며 임분밀도가 높고 수고가 낮은 특성으로 인하여 비교적 작은 유전군락이 형성된 것으로 사료된다. 결과적으로 영실의 구상나무 집단의 보존 복원을 위한 표본추출전략은 15 m의 간격을 두고 개체를 선발하는 것이 타당한 것으로 나타났다.

• Natural Product Sciences
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• 제13권1호
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• pp.11-16
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• 2007

Alcoholic extract of Spathodea campanulata P. aerial parts, and two of the isolated fractions from celite column showed strong antioxidant activity (92, 94 & 89% RSA, Radical Scavenging Activity). Phytochemical investigation of chloroform/EtOAc faction of this column led to the isolation of phenolic acids, caffiec acid (1), and ferulic acid (2), fraction EtOAc/MeOH on further fractionation afforded 3 Flavonoids, kampferol 3-O-glucoside (3), quercetin 3-methyl ether (4) and 8-methoxy kampferol 3-O-glucoside (5). The isolated constituents were identified by co chromatography with authentic samples, TLC, PC., UV, MS and $^1H-NMR$. Also the lipoidal matter of the plant was studied. The unsaponifiable matter was found to be mixture of hydrocarbons from $(C_{14}-C_{28})$, cholesterol, campasterol, stigmasterol, and ${\alpha}-amyrin$. Fatty acid methyl esters were found to contain 12 fatty acids. The fatty acids containing $C_{18}$ farmed ca.65% of the total mixture.