• Title/Summary/Keyword: PRO module

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Web-Based Computational System for Protein-Protein Interaction Inference

  • Kim, Ki-Bong
    • Journal of Information Processing Systems
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    • v.8 no.3
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    • pp.459-470
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    • 2012
  • Recently, high-throughput technologies such as the two-hybrid system, protein chip, Mass Spectrometry, and the phage display have furnished a lot of data on protein-protein interactions (PPIs), but the data has not been accurate so far and the quantity has also been limited. In this respect, computational techniques for the prediction and validation of PPIs have been developed. However, existing computational methods do not take into account the fact that a PPI is actually originated from the interactions of domains that each protein contains. So, in this work, the information on domain modules of individual proteins has been employed in order to find out the protein interaction relationship. The system developed here, WASPI (Web-based Assistant System for Protein-protein interaction Inference), has been implemented to provide many functional insights into the protein interactions and their domains. To achieve those objectives, several preprocessing steps have been taken. First, the domain module information of interacting proteins was extracted by taking advantage of the InterPro database, which includes protein families, domains, and functional sites. The InterProScan program was used in this preprocess. Second, the homology comparison with the GO (Gene Ontology) and COG (Clusters of Orthologous Groups) with an E-value of $10^{-5}$, $10^{-3}$ respectively, was employed to obtain the information on the function and annotation of each interacting protein of a secondary PPI database in the WASPI. The BLAST program was utilized for the homology comparison.

A Study on a Single-Phase Module UPS using a Three-Arm Converter/Inverter

  • Koo, Tae-Geun;Byun, Young-Bok;Joe, Ki-Yeon;Kim, Dong-Hee;Kim, Chul-U
    • KIEE International Transaction on Electrical Machinery and Energy Conversion Systems
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    • v.3B no.1
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    • pp.44-51
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    • 2003
  • The module UPS can flexibly implement expansion of power system capacities. Further-more, it can be used to build up the parallel redundant system to improve the reliability of power system operation. To realize the module UPS, load sharing without interconnection among parallel connecting modules as well as a small scale and lightweight topology is necessary. In this paper, the three-arm converter/inverter is compared with the general full-bridge and half-bridge topology from a practical point of view and chosen as the module UPS topology. The switching control approaches based on a pulse width modulation of the converter and inverter of the system are presented independently. The frequency and voltage droop method is applied to parallel operation control to achieve load sharing. Two prototype 3㎸A modules are designed and implemented to confirm the effectiveness of the pro-posed approaches. Experimental results show that the three-arm UPS system has a high power factor, a low distortion of output voltage and input current, and good load sharing characteristics.

Software Development for Coordinates Conversion Using Open Source (개방형 라이브러리를 이용한 좌표변환 소프트웨어 개발)

  • Kim, Eui-Myoung;Song, Yeong-Sun;Jo, Hyun-Gee
    • Journal of Korean Society for Geospatial Information Science
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    • v.17 no.4
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    • pp.3-11
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    • 2009
  • Open source is recently much more made and distributed by on-line such as internet in various fields. Therefore, end users could rapidly develop applications needed for some purposes using minimal efforts if use open sources. But, open source must be customized for their purposes. In this paper, we developed software for coordinates conversion and compared the software with NGI Pro which is developed by National Geographic Information Institute. Consequently, it is possible for us to easily develop the coordinates conversion module and we know that the use of open source is effective to develop various applications.

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Development of Structural Analysis System for a Ship Block under Lifting and Turnover Operation (선박 블록의 반전 및 이동시 변형예측을 위한 구조해석 시스템의 개발)

  • Han, Jeong-Sam;Lee, Won-Jae;Choo, Yeon-Seok;You, Young-Kyoon;Kwak, Byung-Man
    • Proceedings of the KSME Conference
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    • 2001.06c
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    • pp.219-223
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    • 2001
  • This paper introduces DS/Block-Structure - a structural analysis module of DS/Block, which is a Design System to simulate the behavior of a ship block in various crane operations and to evaluate its structural deformation using the finite element method. It runs based on a CAD program, Pro/ENGINEER, and structural analyses are performed by a developed FE code. Boundary conditions for the FE analysis of a ship block under lifting and turnover operation are also considered.

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Assessment of Power Generation by Pressure Retarded Osmosis Process from Spiral-Wound Membrane Pilot-Plant (나권형 모듈을 이용한 압력지연삼투 공정의 에너지생산에 관한 연구)

  • Go, Gil hyun;Park, Tae shin;Kang, Lim seok
    • Journal of Korean Society of Environmental Engineers
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    • v.38 no.9
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    • pp.476-481
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    • 2016
  • Pressure retarded osmosis (PRO) is a quite new technique for power generation using an osmotically driven membrane process. In the PRO process, water permeates through a semipermeable membrane from a low concentration feed solution to a high concentration draw solution due to osmotic pressure. This study carried out to evaluate the performance of the 8 in spiral wound membrane module using reverse osmosis concentrate for a draw solution and reverse osmosis permeate for a feed solution. Three different flowrates of draw and feed solution, such as 2.4 L/min, 5.0 L/min, and 10.0 L/min were used to estimate the power density and water flux under various range of hydraulic pressure differences between 5 bar and 30 bar. In addition, the effects of feed and draw solution concentration, flowrate, and mixing ratio on 8 in spiral wound PRO membrane module performance were investigated in this study. As major results, increases of the draw solution concentration lead to the improvement of power denstiy, and water flux. Also, increase of flowrate resulted in the improvement of power density and water flux. In addition, optimal mixing ratio of draw and feed solution inlet flowrate was found to be 1:1 to attain a maximum power denstiy.

A Study on Design and Implementation of Embedded System for speech Recognition Process

  • Kim, Jung-Hoon;Kang, Sung-In;Ryu, Hong-Suk;Lee, Sang-Bae
    • Journal of the Korean Institute of Intelligent Systems
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    • v.14 no.2
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    • pp.201-206
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    • 2004
  • This study attempted to develop a speech recognition module applied to a wheelchair for the physically handicapped. In the proposed speech recognition module, TMS320C32 was used as a main processor and Mel-Cepstrum 12 Order was applied to the pro-processor step to increase the recognition rate in a noisy environment. DTW (Dynamic Time Warping) was used and proven to be excellent output for the speaker-dependent recognition part. In order to utilize this algorithm more effectively, the reference data was compressed to 1/12 using vector quantization so as to decrease memory. In this paper, the necessary diverse technology (End-point detection, DMA processing, etc.) was managed so as to utilize the speech recognition system in real time

Design of High Speed Encryption/Decryption Hardware for Block Cipher ARIA (블록 암호 ARIA를 위한 고속 암호기/복호기 설계)

  • Ha, Seong-Ju;Lee, Chong-Ho
    • The Transactions of The Korean Institute of Electrical Engineers
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    • v.57 no.9
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    • pp.1652-1659
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    • 2008
  • With the increase of huge amount of data in network systems, ultimate high-speed network has become an essential requirement. In such systems, the encryption and decryption process for security becomes a bottle-neck. For this reason, the need of hardware implementation is strongly emphasized. In this study, a mixed inner and outer round pipelining architecture is introduced to achieve high speed performance of ARIA hardware. Multiplexers are used to control the lengths of rounds for 3 types of keys. Merging of encryption module and key initialization module increases the area efficiency. The proposed hardware architecture is implemented on reconfigurable hardware, Xilinx Virtex2-pro. The hardware architecture in this study shows that the area occupied 6437 slices and 128 BRAMs, and it is translated to throughput of 24.6Gbit/s with a maximum clock frequency of 192.9MHz.

Chitosan surface grafted with fusion protein of FGF-2 and Fibronectin-FGF for tissue regeneration therapy

  • Hwang, Jeong-Hyo;Lee, Jue-Yeon;Kim, Sun-Chul;Jang, Jun-Hyeog;Ku , Young;Chung, Chong-Pyoung;Lee, Seung-Jin
    • Proceedings of the PSK Conference
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    • 2003.10b
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    • pp.231.3-232
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    • 2003
  • The biomedical applications of chitosan have been widely researched. FN mediates its biological effects through binding to the hetero-dimeric transmembrane glycoproteins, integrins, which physically couple the cytoskeleton to the ECM. FN binds to the integrin through a consensus site including the Arg-Gly-Asp (RGD) sequence within tenth type III module (Ruoslahti & Pierschbacher 1987). A short sequence Pro-His-Ser-Arg-Asn (PHSRN) has also been identified as a synergistic motif within ninth type III module for binding to ${\alpha}$5${\beta}$1 integrin (Aota et al. 1994). (omitted)

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A Progressive Automated-Process Planning and Die Design and Working System for Blanking or Piercing and Bending of Sheet Metal Product (박판제품의 블랭킹 및 피어싱과 굽힘 가공을 위한 순차이송용 공정 및 금형 설계와 가공자동화 시스템)

  • Choe, Jae-Chan;Kim, Chul
    • Transactions of Materials Processing
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    • v.7 no.3
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    • pp.246-259
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    • 1998
  • This paper describes a research work of developing a computer-aided design and manufacturing of irregular shaped sheet metal product for blanking or piercing and bending operations. An approach to the system is based on the knowledge-based rules. Knowledge for the system is formulated from plasticity theories experimental results and the empirical knowledge of field experts, This system has been written in AutoLISp on the AutoCAD and in customer tool kit on the SmartCAM with a personal computer and is composed of nine modules which are input and shape treatment, flat pattern-layout, pro-processor module. Based on the knowledge-based rules, the system is designed by considering several factors, such as material and thickness of product complexities of blank geometry and punch profile sheet metal to give flat pattern and automatically account for the adjustment of bending allowances to match tooling requirements by checking dimensions and generating NC data automatically according to drawings of die-layout module. Results carried out in each module will provide efficiencies to the designer and the manufacturer of blanking or piercing and bending die in this field.

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Design and Implementation of Cattle Estrus Detection System based on Wireless Communication and Internet of Things (무선 통신과 사물인터넷 기반의 소 발정 관찰 시스템 설계 및 구현)

  • Lee, Ha-Woon
    • The Journal of the Korea institute of electronic communication sciences
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    • v.13 no.6
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    • pp.1309-1316
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    • 2018
  • Cattle estrus detection system based on Internet of Things is designed and implemented by using Arduino pro-mini, gyroscope, acceleration sensor, bluetooth master and slave module. The implemented system measures cattle's moving and the measured data are transmitted to the computer connected to RX module by bluetooth TX module. They are plotted in 2-dimensional graph on the computer monitor and the number of transition at each sensor axis are calculated from the graph. The detected and gathered data from the system are analyzed by the proposed algorithm to decide which cows are in the estrus or not. The method to apply bluetooth scatternet is shown and the proposed system can be used to increase the success rate of artificial insemination in normal estrus by detecting the cow's behaviors such as the number of jumping. In this paper, the implemented cattle behavior detecting the system(TX module) are strapped on cattle's leg and it measures the cattle behaviors for determining where that a cattle is estrus or not by the proposed algorithm.