• 제목/요약/키워드: PLS (Partial least squares regression)

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다변량 분석법을 이용한 Tryptophan과 Tyrosine의 형광분광법적 정량 (Simultaneous Determination of Tryptophan and Tyrosine by Spectrofluorimetry Using Multivariate Calibration Method)

  • 이상학;박주은;손범목
    • 대한화학회지
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    • 제46권4호
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    • pp.309-317
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    • 2002
  • 형광분광법에 의하여 주성분 회귀분석(principal component regression, PCR)과 부분 최소자승법(Partial least squares, PLS)을 이용하여 아미노산(Tryptophan and Tyrosine)을 동시에 정량하는 방법에 대하여 연구하였다. 아미노산 혼합물의 형광 스펙트럼은 들뜸파장을257nm로 고정하여 측정하였다. 두 가지 아미노산이 서로 다른 농도로 혼합되어 있는 32개의 시료용액을 280nm∼500nm 범위에서 스펙트럼들을 얻었고 이를 이용하여 PCR과 PLS회귀모델을 얻었다. 두 가지 아미노산이 서로 다른 농도로 포함된 6개의 외부검정용 시료들의 스펙트럼들을 이용해서 회귀모델의 적합성을 검정하기 위하여 외부검정용 시료의 농도를 계산하였다. 계산된 농도를 이용하여 relative standard error of prediction($RSEP_a$)를 얻었고 같은 방법으로 overall relative standard error of prediction($RSEP_m$) 도 구하였다

근적외선을 이용한 온라인 석탄 성상분석 방법 (The Technology for On-line Measurement of Coal Properties by using Near-Infrared)

  • 김동원;이종민;김재성;김학종
    • Korean Chemical Engineering Research
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    • 제45권6호
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    • pp.596-603
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    • 2007
  • 실시간 온라인 석탄 성상분석은 효율적인 석탄 화력발전소 운영을 위해 반드시 필요한 기술이다. 온라인 석탄 성상분석 기술 개발을 위해 다변량 분석기법을 사용하여 확산 반사방식을 통해 얻은 석탄의 근적외선 스펙트럼과 석탄 성상(%)[수분, 회분, 휘발분, 고정탄소, 탄소, 수소, 질소, 산소, 황], 발열량(kcal/kg)간의 관계를 조사하였다. 현재 석탄 화력발전소에서 사용하는 40여종의 석탄에서 얻은 근적외선 스펙트럼을 전처리[2차 미분, MSC(multiplicative scatter correction)]를 통해 물리적 영향을 최소화하여 석탄 성상과의 관계를 PLS(partial least squares regression), PCA(principal component analysis)의 chemometrics 기법을 이용하여 정량 분석하였다. 분석 결과 본 기법을 통해 근적외선 스펙트럼으로 석탄 성상 중 회분, 질소 그리고 황을 제외한 나머지 성분에 대해 분석이 가능함을 확인할 수 있었다. 또한 PC(PLS component)의 값을 이용하여 석탄의 종류를 구별한 다음, 다변량 통계기법을 사용하여 정량 분석한 결과, 전체 석탄을 이용해서 정량 분석한 결과에 비해 비교적 좋은 결과를 얻었다. 수분, 발열량이 실시간으로 분석 가능하여 보다 효율적인 석탄 화력발전소 운영이 가능할 것으로 예상된다.

다변량 분석법에 의한 Anionic Surfactant와 Nonionic Surfactant의 동시정량 (Simultaneous Determination of Anionic and Nonionic Surfactants Using Multivariate Calibration Method)

  • 이상학;권순남;손범목
    • 대한화학회지
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    • 제47권1호
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    • pp.19-25
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    • 2003
  • 흡수 분광법에 의해 얻은 스펙트럼을 주성분분석(principal analysis, PCA) 으로 자료를 요약하여 주성분 회귀분서(principal component regression, PCR)과 부분 최소자승법(partial least squares, PLS)으로 음이온과 비이온 계면활성제(anionic and nonionic surfactant)를 동시에 정량하는 방법에 대하여 연구하였다. 두 가지 계면활성제가 서로 다른 농도로 혼합되어 있는 26개의 시료용액을 400~700 nm 범위에서 스펙트럼을 얻었고, 이를 이용하여 PCR과 PLS회귀모델을 얻었다. 두 가지 계면활성제가 서로 다른 농도로 포함된 5개의 외부검정용 시료들의 스펙트럼들을 이용해서 회귀모델의 적합성을 검정하기 위하여 외부검정용 시료의 농도를 계산하였다. 계산된 농도를 이용하여 relative standard error of prediction(RSEP$_{\alpha}$)를 구하여 회귀모델의 적합성을 검정하였다.

Rapid Prediction of Amylose Content of Polished Rice by Fourier Transform Near-Infrared Spectroscopy

  • Lee, Jin-Cheol;Yoon, Yeon-Hee;Kim, Sun-Min;Pyo, Byong-Sik;Hsieh, Fu-Hung;Kim, Hak-Jin;Eun, Jong-Bang
    • Food Science and Biotechnology
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    • 제16권3호
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    • pp.477-481
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    • 2007
  • Fourier transform near-infrared (FT-NIR) spectroscopy and partial least squares (PLS) regression were used to predict the amylose content of polished rice. Spectral reflectance data in a wavelength range of 1,000 to 2,500 nm were obtained with a commercial spectrophotometer for 60 different varieties of Korean rice. For a comparison of this spectroscopic method to a standard chemical analysis, the amylose contents of the tested rice samples were determined by the iodine-blue colorimetric method. The highest correlation for the rice amylose ($R^2=0.94$, standard error of prediction=0.20% amylose content) was obtained when using the FT-NIR spectrum data pre-treated with normalization, the first derivative, smoothing, and scattering correction.

Partial Least Squares Based Gene Expression Analysis in EBV-Positive and EBV-Negative Posttransplant Lymphoproliferative Disorders

  • Wu, Sa;Zhang, Xin;Li, Zhi-Ming;Shi, Yan-Xia;Huang, Jia-Jia;Xia, Yi;Yang, Hang;Jiang, Wen-Qi
    • Asian Pacific Journal of Cancer Prevention
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    • 제14권11호
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    • pp.6347-6350
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    • 2013
  • Post-transplant lymphoproliferative disorder (PTLD) is a common complication of therapeutic immunosuppression after organ transplantation. Gene expression profile facilitates the identification of biological difference between Epstein-Barr virus (EBV) positive and negative PTLDs. Previous studies mainly implemented variance/regression analysis without considering unaccounted array specific factors. The aim of this study is to investigate the gene expression difference between EBV positive and negative PTLDs through partial least squares (PLS) based analysis. With a microarray data set from the Gene Expression Omnibus database, we performed PLS based analysis. We acquired 1188 differentially expressed genes. Pathway and Gene Ontology enrichment analysis identified significantly over-representation of dysregulated genes in immune response and cancer related biological processes. Network analysis identified three hub genes with degrees higher than 15, including CREBBP, ATXN1, and PML. Proteins encoded by CREBBP and PML have been reported to be interact with EBV before. Our findings shed light on expression distinction of EBV positive and negative PTLDs with the hope to offer theoretical support for future therapeutic study.

미국 중부 토양의 이화학적 특성 추정을 위한 광 확산 반사 신호 전처리 및 캘리브레이션 (Preprocessing and Calibration of Optical Diffuse Reflectance Signal for Estimation of Soil Physical and Chemical Properties in the Central USA)

  • 나우정;;정선옥;김학진
    • Journal of Biosystems Engineering
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    • 제33권6호
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    • pp.430-437
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    • 2008
  • Optical diffuse reflectance sensing in visible and near-infrared wavelength ranges is one approach to rapidly quantify soil properties for site-specific management. The objectives of this study were to investigate effects of preprocessing of reflectance data and determine the accuracy of the reflectance approach for estimating physical and chemical properties of selected Missouri and Illinois, USA surface soils encompassing a wide range of soil types and textures. Diffuse reflectance spectra of air-dried, sieved samples were obtained in the laboratory. Calibrations relating spectra to soil properties determined by standard methods were developed using partial least squares (PLS) regression. The best data preprocessing, consisting of absorbance transformation and mean centering, reduced estimation errors by up to 20% compared to raw reflectance data. Good estimates ($R^2=0.83$ to 0.92) were obtained using spectral data for soil texture fractions, organic matter, and CEC. Estimates of pH, P, and K were not good ($R^2$ < 0.7), and other approaches to estimating these soil chemical properties should be investigated. Overall, the ability of diffuse reflectance spectroscopy to accurately estimate multiple soil properties across a wide range of soils makes it a good candidate technology for providing at least a portion of the data needed in site-specific management of agriculture.

Photo Diode Array형의 휴대용 근적외 분광기와 FT 근적외 분광기를 이용한 Hairless Mouse 피부 수분 정량 (Quantification of Skin Moisture in Hairless Mouse by using a Portable NIR System and a FT NIR Spectrometer)

  • 서은정;우영아;김효진
    • 약학회지
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    • 제49권2호
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    • pp.115-121
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    • 2005
  • In this study, the performance of a portable NIR system and a FT NIR spectrometer were compared to determine water content of hairless mouse skin. The stratum corneum parts wer e separated from the epidermal tissues by trypsin solution. NIR diffuse reflectance spectra of hairless mouse skin were acquired using a fiber optic probe. In the near infrared, water molecules show two clear absorption bands at 1450 nm from first overtone of O-H stretching and 1940 nm from the combination involving O-H stretching and O-H deformation. It was found that the variations of O-H absorption band according to water content. Partial least squares regression (PLSR) was applied to develop a calibration model. The PLS model showed a good correlation between NIR predicted value and the absolute water content of separated hairless mouse skin, in vitro. For both the portable and the FT NIR spectrometer, These studies showed the possibility of a rapid and nondestructive skin moisture measurement using NIR spectroscopy. The portable NIR spectrometer with a photodiode arrays-microsensor could be more rapidly applied for the determination of water content with comparable accuracy with the performance of a FT spectrometer .

도시의 산업특성이 미세먼지 농도에 미치는 영향 (The Impacts of Industrial Characteristics of Cities on Fine Dust Levels)

  • 음정인;김형규
    • 한국환경과학회지
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    • 제29권5호
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    • pp.445-455
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    • 2020
  • Fine dust is one of the most critical environmental issues in Korea, and the government recognizes the need to establish customized reduction policies based on regional characteristics. Several studies on air pollutants investigate whether factories affect the distribution of fine dust in a particular region. However, understanding the impact of the entire industry sector requires further investigation. This study identifies the impacts of industrial characteristics on fine dust levels of 141 municipalities across Korea in 2016. A total of 23 variables were used, of which 12 referred to industries and 11 to general characteristics of each city. Due to the high correlation between independent variables, partial least squares (PLS) regression models were used. The analysis identified 14 significant variables for PM10 and 13 for PM2.5. Therefore, the results suggest that local industrial characteristics can significantly influence fine dust levels and provide suggestions for establishing customized reduction policies based on local characteristics.

Rapid Compositional Analysis of Naphtha by Near-Infrared Spectroscopy

  • 구민식;정호일;이준식
    • Bulletin of the Korean Chemical Society
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    • 제19권11호
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    • pp.1189-1193
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    • 1998
  • The determination of total paraffin, naphthene, and aromatic (PNA) contents in naphtha samples, which were directly obtained from actual refining process, has been studied using near-infrared (NIR) spectroscopy. Each of the total PNA concentrations in naphtha has been successfully analyzed using NIR spectroscopy. Partial least squares (PLS) regression method has been utilized to quantify the total PNA contents in naphtha from the NIR spectral bands. The NIR calibration results showed an excellent correlation with those of conventional gas chromatography (GC). Due to its rapidity and accuracy, NIR spectroscopy is appeared as a new analytical technique which can be substituted for the conventional GC method for the quantitative analysis of petrochemical products including naphtha.

희소 부분 최소 제곱법을 이용한 우리나라 청소년 인터넷 중독 자료 분석 (Analysis of internet addiction in Korean adolescents using sparse partial least-squares regression)

  • 한정섭;박수빈;이동환
    • 응용통계연구
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    • 제31권2호
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    • pp.253-263
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    • 2018
  • 본 연구에서는 우리나라 청소년의 인터넷 중독 자료를 희소 부분 최소제곱법을 적용 하여 분석하였다. 서울 성모병원에서 수집된 자가보고 방식의 인터넷 중독 측도와 다양한 임상 및 정신 병리학적 설문 문항들을 자료로 활용하였다. 표본의 개수보다 설문 문항의 수가 많은 고차원 자료이며, 각 세부문항끼리는 상관관계가 높아 부분 최소제곱법이 좋은 회귀분석 모형이다. 보다 높은 예측 성능과 해석력을 얻기위해 희소성 제약 조건이 가능한 희소 부분 최소 제곱법을 이용하였고, 2가지 다른 벌칙함수를 이용하여 가장 좋은 방법을 선택하였다. 또한, 제안된 최종 모형을 통해 인터넷 중독이 임상 및 정신 병리학적 측도들로 잘 설명됨을 보이고, 공격성과 관련된 다른 설문 문항이 설문 문항이 모형의 잠재성분을 구별하고 설명하는데 역할을 한다는 유의미한 결과를 도출하였다.