• Title/Summary/Keyword: Optimized analysis

Search Result 3,458, Processing Time 0.029 seconds

Evaluation of Volumetric Texture Features for Computerized Cell Nuclei Grading

  • Kim, Tae-Yun;Choi, Hyun-Ju;Choi, Heung-Kook
    • Journal of Korea Multimedia Society
    • /
    • v.11 no.12
    • /
    • pp.1635-1648
    • /
    • 2008
  • The extraction of important features in cancer cell image analysis is a key process in grading renal cell carcinoma. In this study, we applied three-dimensional (3D) texture feature extraction methods to cell nuclei images and evaluated the validity of them for computerized cell nuclei grading. Individual images of 2,423 cell nuclei were extracted from 80 renal cell carcinomas (RCCs) using confocal laser scanning microscopy (CLSM). First, we applied the 3D texture mapping method to render the volume of entire tissue sections. Then, we determined the chromatin texture quantitatively by calculating 3D gray-level co-occurrence matrices (3D GLCM) and 3D run length matrices (3D GLRLM). Finally, to demonstrate the suitability of 3D texture features for grading, we performed a discriminant analysis. In addition, we conducted a principal component analysis to obtain optimized texture features. Automatic grading of cell nuclei using 3D texture features had an accuracy of 78.30%. Combining 3D textural and 3D morphological features improved the accuracy to 82.19%. As a comparative study, we also performed a stepwise feature selection. Using the 4 optimized features, we could obtain more improved accuracy of 84.32%. Three dimensional texture features have potential for use as fundamental elements in developing a new nuclear grading system with accurate diagnosis and predicting prognosis.

  • PDF

Analysis of Hypoxia-Inducible Factor Stabilizers by a Modified QuEChERS Extraction for Antidoping Analysis

  • Kim, Si Hyun;Lim, Nu Ri;Min, Hophil;Sung, Changmin;Oh, Han Bin;Kim, Ki Hun
    • Mass Spectrometry Letters
    • /
    • v.11 no.4
    • /
    • pp.118-124
    • /
    • 2020
  • An analytical method was developed for hypoxia-inducible factor (HIF) stabilizers based on QuEChERS (Quick, Easy, Cheap, Effective, Rugged, and Safe) sample preparation and liquid chromatography-high resolution mass spectrometry analysis. HIF stabilizers potentially enhance the performance of athletes, and hence, they have been prohibited. However, the analysis of urinary HIF stabilizers is not easy owing to their unique structure and characteristics. Hence, we developed the QuEChERS preparation technique for a complementary method and optimized the pH, volume of extraction solvent, and number of extractions. We found that double extraction with 1% of formic acid in acetonitrile provided the highest recovery of HIF stabilizers. Moreover, the composition of the mobile phase was also optimized for better separation of molidustat and IOX4. The developed method was validated in terms of its precision, detection limit, matrix effect, and recovery for ISO accreditation. To the best of our knowledge, this is the first demonstration of the application of the QuEChERS method, which is suitable as a complementary analytical method, in antidoping.

Synthesis and 3D-QSARs Analyses of Herbicidal O,O-Dialkyl-1-phenoxyacetoxy-1-methylphosphonate Analogues as a New Class of Potent Inhibitors of Pyruvate Dehydrogenase

  • Soung, Min-Gyu;Hwang, Tae-Yeon;Sung, Nack-Do
    • Bulletin of the Korean Chemical Society
    • /
    • v.31 no.5
    • /
    • pp.1361-1367
    • /
    • 2010
  • A series of O,O-dialkyl-1-phenoxyacetoxy-1-methylphosphonate analogues (1~22) as a new class of potent inhibitors of pyruvate dehydrogenase were synthesized and 3D-QSARs (three dimensional qantitative structure-activity relationships) models on the pre-emergency herbicidal activity against the seed of cucumber (Cucumus Sativa L.) were derived and discussed quantitatively using comparative molecular field analysis (CoMFA) and comparative molecular similarity indeces analysis (CoMSIA) methods. The statistical values of CoMSIA models were better predictability and fitness than those of CoMFA models. The inhibitory activities according to the optimized CoMSIA model I were dependent on the electrostatic field (41.4%), the H-bond acceptor field (26.0%), the hydrophobic field (20.8%) and the steric field (11.7%). And also, it was found that the optimized CoMSIA model I with the sensitivity to the perturbation ($d_q{^{2'}}/dr^2{_{yy'}}$ = 0.830) and the prediction ($q^2$ = 0.503) produced by a progressive scrambling analyses were not dependent on chance correlation. From the results of graphical analyses on the contour maps with the optimized CoMSIA model I, it is expected that the structural distinctions and descriptors that subscribe to herbicidal activities will be able to apply new an herbicide design.

A 3-D Steady-State Analysis of Thermal Behavior in EHV GIS Busbar

  • Lei, Jin;Zhong, Jian-ying;Wu, Shi-jin;Wang, Zhen;Guo, Yu-jing;Qin, Xin-yan
    • Journal of Electrical Engineering and Technology
    • /
    • v.11 no.3
    • /
    • pp.781-789
    • /
    • 2016
  • Busbar has been used as electric conductor within extra high voltage (EHV) gas insulated switchgear (GIS), which makes EHV GIS higher security, smaller size and lower cost. However, the main fault of GIS is overheating of busbar connection parts, circuit breaker and isolating switch contact parts, which has been already restricting development of GIS to a large extent. In this study, a coupled magneto-flow-thermal analysis is used to investigate the thermal properties of GIS busbar in steady-state. A three-dimensional (3-D) finite element model (FEM) is built to calculate multiphysics fields including electromagnetic field, flow field and thermal field in steady-state. The influences of current on the magnetic flux density, flow velocity and heat distribution has been investigated. Temperature differences of inner wall and outer wall are investigated for busbar tank and conducting rod. Considering the end effect in the busbar, temperature rise difference is compared between end sections and the middle section. In order to obtain better heat dissipation effect, diameters of conductor and tank are optimized based on temperature rise simulation results. Temperature rise tests have been done to validate the 3-D simulation model, which is observed a good correlation with the simulation results. This study provides technical support for optimized structure of the EHV GIS busbar.

Mechanical behavior investigation of steel connections using a modified component method

  • Chen, Shizhe;Pan, Jianrong;Yuan, Hui;Xie, Zhuangning;Wang, Zhan;Dong, Xian
    • Steel and Composite Structures
    • /
    • v.25 no.1
    • /
    • pp.117-126
    • /
    • 2017
  • The component method is an analytical approach for investigating the moment-rotation relationship of steel connections. In this study, the component method was improved from two aspects: (i) load analysis of mechanical model; and (ii) combination of spring elements. An optimized component method with more reasonable component models, spring arrangement position, and boundary conditions was developed using finite element analysis. An experimental testing program in two major-axis and two minor-axis connections under symmetrically loading was carried out to verify this method. The initial rotational stiffness obtained from the optimized component method was consistent with the experimental results. It can be concluded that (i) The coupling stiffness between column and beam flanges significantly affects the effective height of the tensile-column web. (ii) The mechanical properties of the bending components were obtained using an equivalent t-stub model considering the bending capacity of bolts. (iii) Using the optimized mechanical components, the initial rotational stiffness was accurately calculated using the spring system. (iv) The characteristics of moment-rotation relationship for beam to column connections were effectively expressed by the SPRING element analysis model using ABAQUS. The calculations are simpler, and the results are accurate.

Oil Carrier, Development of on Optimized Anti-Splash Device Model for COT Vent Pipe (유조선, COT Vent Pipe용 Anti-Splash Device 최적 모델 개발)

  • Na, Ok-kyun;Jeon, Young-Soo;Park, Sin-kil;Kim, Jong-Ho
    • Special Issue of the Society of Naval Architects of Korea
    • /
    • 2015.09a
    • /
    • pp.50-55
    • /
    • 2015
  • Application of newly conceptualized Anti-Splash Devices designed for COT vent pipes were studied on a P/V valve located on the upper deck of an oil carrier vessel. Anti-Splash devices are used in the shipbuilding industry in order to avoid oil overflow and spray accidents caused by excess pressure and vacuum condition in the cargo oil tanks. These conditions are caused by the transverse and longitudinal sloshing forces that arise from ship motion during sea voyages. The main issue with existing Anti-Splash device model is flux at the outlet of the Anti-Splash Device, and so, new conceptual models for the Anti-Splash device were developed and compared to existing Anti-Splash device model using CFD analysis. Transient analysis was used to capture the flow and velocity of each model and a comparative analysis was performed between old and new-concept models. This data was used to determine the optimal design parameters in order to develop an optimized Anti-Splash Device. A Factory acceptance test was performed on the new-concept models in order to verify the performance and efficiency against their design requirements and other criterion. The final step performed was to apply the optimized Anti-Splash Device models for COT vent pipes to an actual vessel and verify performance through a seawater cargo operation during a sea voyage as per the ship owner's request. The patent for the aforementioned device was obtained by the Korean Intellectual property Office dated Dec. 18th,2014.

  • PDF

Prefetch R-tree: A Disk and Cache Optimized Multidimensional Index Structure (Prefetch R-tree: 디스크와 CPU 캐시에 최적화된 다차원 색인 구조)

  • Park Myung-Sun
    • The KIPS Transactions:PartD
    • /
    • v.13D no.4 s.107
    • /
    • pp.463-476
    • /
    • 2006
  • R-trees have been traditionally optimized for the I/O performance with the disk page as the tree node. Recently, researchers have proposed cache-conscious variations of R-trees optimized for the CPU cache performance in main memory environments, where the node size is several cache lines wide and more entries are packed in a node by compressing MBR keys. However, because there is a big difference between the node sizes of two types of R-trees, disk-optimized R-trees show poor cache performance while cache-optimized R-trees exhibit poor disk performance. In this paper, we propose a cache and disk optimized R-tree, called the PR-tree (Prefetching R-tree). For the cache performance, the node size of the PR-tree is wider than a cache line, and the prefetch instruction is used to reduce the number of cache misses. For the I/O performance, the nodes of the PR-tree are fitted into one disk page. We represent the detailed analysis of cache misses for range queries, and enumerate all the reasonable in-page leaf and nonleaf node sizes, and heights of in-page trees to figure out tree parameters for best cache and I/O performance. The PR-tree that we propose achieves better cache performance than the disk-optimized R-tree: a factor of 3.5-15.1 improvement for one-by-one insertions, 6.5-15.1 improvement for deletions, 1.3-1.9 improvement for range queries, and 2.7-9.7 improvement for k-nearest neighbor queries. All experimental results do not show notable declines of the I/O performance.

A Study for Optimized Detecter Location Considering the Traffic Characteristics in National Highway (일반국도 통행특성을 고려한 지점검지기의 적정설치지점 선정에 관한 연구)

  • Byeon, Sang-Cheol;Lee, Seung-Jae
    • Journal of Korean Society of Transportation
    • /
    • v.24 no.2 s.88
    • /
    • pp.19-30
    • /
    • 2006
  • This study deals with the optimized detector location considering the traffic characteristics in National Highway. Although there ave many construction works for ITS in National Highway, there is not specific criteria for detector location which can effect the accuracy of traffic information. This study. therefore. aims to Provide the optimized detector location criteria which can represent the traffic characteristics of National Highway. It collects traffic factors of study area by GPS Probe-car and defector, and Presents the optimized detector location by the correlation analysis between spot-speed and link-travel-time. The main results of this study are as followings ; First, the correlation between the spot-speed and link-travel-time Presents the opposite bell shape of the graph (U-type owe) which is increased it?on the upstream then, declined through some unspecified Point of the link. Second, the optimized detector location usually distributes around midstream of link, even though it does not have a consistency. Third, therefore, the optimized detector location generally should be located between $55{\sim}60%$ of total link length. Forth. high level of vertical slope is one of the most important factors of detector location, so it should be excluded for determination of optimized detector location. Finally, expecting that the results of this study would improve the accuracy of travel time estimation and forecasting.

Designing optimized food intake patterns for Korean adults using linear programming (I): analysis of data from the 2010~2014 Korea National Health and Nutrition Examination Survey (선형계획법을 이용한 한국 성인의 최적 식품섭취패턴 설계 (I) : 2010~ 2014년 국민건강영양조사 자료 분석)

  • Asano, Kana;Yang, Hongsuk;Lee, Youngmi;Yoon, Jihyun
    • Journal of Nutrition and Health
    • /
    • v.51 no.1
    • /
    • pp.73-86
    • /
    • 2018
  • Purpose: The aim of this study was to design optimized food intake patterns that meet the nutritional recommendations with minimal changes from the current food intake patterns among Korean adults using linear programming. Methods: Data of a one day 24-hour dietary recall from the 2010 ~ 2014 Korea National Health and Nutrition Survey were used to quantify the food items that Korean adults usually consumed. These food items were categorized into seven groups and 24 subgroups. The mean intakes and intake distributions of the food groups and the food subgroups were calculated for eight age (19 ~ 29, 30 ~ 49, 50 ~ 64, and over 65 years old) and gender (male and female) groups. A linear programming model was constructed to minimize the difference between the optimized and mean intakes of the food subgroups while meeting the Dietary Reference Intakes for Koreans (KDRIs) for energy and 13 nutrients, and not exceeding the typical quantities of each food subgroup consumed by the respective age and gender groups. Results: The optimized food intake patterns, which were a set of quantities of 24 food subgroups, were obtained mathematically for eight age and gender groups. Overall, major modifications of current diet were required to increase the intake of vegetables and milk/dairy products and decrease the Kimchi intake. The optimized intake of seasonings, including salt, was calculated to be 0 g for all the age and gender groups. Conclusion: The optimized food intake patterns designed using linear programming in this study lack feasibility because they suggest a seasoning consumption of 0 g. Modification of intake goal for sodium is needed to obtain optimized food intake patterns with improved feasibility.

development of a model of the exhaust System for the Stress Analysis (응력해석을 위한 배기계 모델 개발)

  • 이장명;박성태;김상호;조규수
    • Proceedings of the Korean Society for Noise and Vibration Engineering Conference
    • /
    • 1997.10a
    • /
    • pp.370-376
    • /
    • 1997
  • A Simplified Finite Element Method(FEM) model has been developed for the Exhaust System. For the verification of the usage of the developed model , Natural Frequencies, Mode Shapes and Frequency Response Function have been compared between numerical analysis and experimental result. It shows that the developed numerical model also can be utilized to prove the Stress distribution of the Exhaust System if it can be adopted for the vibration analysis adequately.

  • PDF