• 제목/요약/키워드: O-D Matrix

검색결과 258건 처리시간 0.029초

RNA-seq profiling of skin in temperate and tropical cattle

  • Morenikeji, Olanrewaju B.;Ajayi, Oyeyemi O.;Peters, Sunday O.;Mujibi, Fidalis D.;De Donato, Marcos;Thomas, Bolaji N.;Imumorin, Ikhide G.
    • Journal of Animal Science and Technology
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    • 제62권2호
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    • pp.141-158
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    • 2020
  • Skin is a major thermoregulatory organ in the body controlling homeothermy, a critical function for climate adaptation. We compared genes expressed between tropical- and temperate-adapted cattle to better understand genes involved in climate adaptation and hence thermoregulation. We profiled the skin of representative tropical and temperate cattle using RNA-seq. A total of 214,754,759 reads were generated and assembled into 72,993,478 reads and were mapped to unique regions in the bovine genome. Gene coverage of unique regions of the reference genome showed that of 24,616 genes, only 13,130 genes (53.34%) displayed more than one count per million reads for at least two libraries and were considered suitable for downstream analyses. Our results revealed that of 255 genes expressed differentially, 98 genes were upregulated in tropically-adapted White Fulani (WF; Bos indicus) and 157 genes were down regulated in WF compared to Angus, AG (Bos taurus). Fifteen pathways were identified from the differential gene sets through gene ontology and pathway analyses. These include the significantly enriched melanin metabolic process, proteinaceous extracellular matrix, inflammatory response, defense response, calcium ion binding and response to wounding. Quantitative PCR was used to validate six representative genes which are associated with skin thermoregulation and epithelia dysfunction (mean correlation 0.92; p < 0.001). Our results contribute to identifying genes and understanding molecular mechanisms of skin thermoregulation that may influence strategic genomic selection in cattle to withstand climate adaptation, microbial invasion and mechanical damage.

Stress Tolerance of Bifidobacterium infantis ATCC 27920 to Mild-heat Adaptation

  • Kang, Seok-U;Kim, Young-Hoon;Cho, In-Shick;Kang, Ja-Heon;Chun, Il-Byung;Kim, Kwang-Hyun;Oh, Se-Jong
    • Food Science and Biotechnology
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    • 제18권1호
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    • pp.249-252
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    • 2009
  • Two-dimensional gel electrophoresis (2-DE) was employed to assess the thermo-tolerance characteristics of Bifrdobacterium infantis ATCC 27920 to mild heat adaptation. When exposed to various heat levels, pH, and hydrogen peroxide ($H_2O_2$) stress conditions, B. infantis ATCC 27920 exhibited high level of stress resistance. Under mild-heat treatment ($46^{\circ}C$), no significant change in viability level was observed after 2 hr. Interestingly, improved viability was observed in mild-heat adapted ($46^{\circ}C$ for 1 hr) cultures exposed to $55^{\circ}C$, in comparison to control experiments. Viability was not affected by pH, bile, and $H_2O_2$ stress conditions. 2-DE analysis revealed those mild-heat adaptation up-regulated 4 proteins and down-regulated 3 proteins. Among these protein spots, isopropyhnalate dehydratase (leuD), glycosyltransferase (glgA), and ribosomal protein L5 (rp1E) were identified by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALD1-TOF/MS).

Tetrahomodioxa p-phenylcalix(4) arene dihexylether의 합성 및 구조에 관한 연구 (Synthesis and Structure of Tetrahomodioxa p-phenylcalix(4)arene dihexylether)

  • 노광현;박영자
    • 한국결정학회지
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    • 제13권3_4호
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    • pp.158-164
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    • 2002
  • Tetrahomodioxa p-phenylcalix(4)arene dihexylether (C/sub 66/H/sub 68/O/sub 6/)를 합성하여 분자 및 결정 구조를 X-선 회절법으로 연구하였다. p-Phenylphenol의 탈수, 고리화 반응으로 만든 tetrahomodioxa p-phenylcalix(4)arene을 DMF에서 NaH와 hexyl iodide를 환류시켜 합성하였다. 결정은 사방정계이고 공간군은 P2₁2₁2₁, a =9.764(2), b = 16.167(2), c = 32.994(3) Å, V=5208(1) ų, Z= 4, Dc=1.221 gcm/sup -3/이다. 직접법으로 구조를 해석하였으며, 최소자승법으로 정밀화하여 최종 신뢰도 R 값은 2009개의 회절 반점에 대해 0.070 이었다. 이 분자는 마주 보고 있는 phenyl group 두 쌍이 거의 평행을 이루며, C-1,2-alternate conformation이고, lower rim의 1,3 위치에 hexyl 기가 치환된 비대칭 homooxacalixarene이다.

The Structure of 1-[2-[[(4-chlorophenyl)-methyl]thio]-2-(2, 4-dichlorphenyl)ethyl]-1H imidazole (Sulconazole) nitrate, C18H16Cl3N3O3S

  • Shin, Hyun-So;Song, Hyun;Cho, Sung-Il;Pakr, Keun-Il
    • Bulletin of the Korean Chemical Society
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    • 제18권1호
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    • pp.14-18
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    • 1997
  • Sulconazole nitrate, C18H16Cl3N3O3S, crystallizes in monoclinic, space group C2/c, with a=14.401(1), b=8.051(1), c=34.861(2) Å, β=95.9(1)°, g=0.58 mm-1, Dc=1.523 g/cm3, Dm=1.522 g/cm3, F(000)=1888.0, and z=8. Intensities for 2460 unique reflections were measured on a CAD4 diffractometer with graphited-monochromated Mo-Kα radiation. The structure was solved by direct method and refined by full matrix least squares to a final R=0.071 for 2182 reflections (Io > 2σIo). The bond lengths and angles are comparable with the values found in the analogues imidazole derivatives. The 2,4-dichlorophenyl ring(A) and the p-chlorophenyl ring(B) are almost planar with different heights [dihedral angle 17.3°] while the imidazole ring(C) is nearly perpendicular to the two phenyl rings[dihedral angles about the two rings A, B are 110.8° and 96.1° respectively]. In order to understand the overall conformation we calculated the selected distances (l1, l2, l3) among the center of the three rings and considered the imaginary plan D[C(7), C(9) and C(16)]. The two polar group S(8) and N(19) do not have gauche conformation and l2 value (4.47 Å) is shorter than the other imidazole derivatives. One -NO3 group are hydrogen bonded the two neighbored sulconazole molecules. The molecular crystal packing is also formed by two hydrogen bondings and van der Waals forces.

Crystal Structure of Penicillin V Potassium Salt

  • Kim, Whan-Chul;Yi, Seung-Ho;Shin, Jung-Mi;Yoon, Tae-Sung
    • Bulletin of the Korean Chemical Society
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    • 제14권6호
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    • pp.713-717
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    • 1993
  • The crystal structure of the potassium salt of penicillin V has been studied by the X-ray crystallographic methods. Crystal data are as follows; potassium 3,3-dimethyl-7-oxo-6-phenoxyacetoamido-4-thia-1- azabicyclo[3.2.0]-heptane-2${\alpha}$-carboxylate, $K^+{\cdot}C_{16}H_{18}N_2O_5S^-$, $M_r$= 388.5, triclinic, Pl, a= 9.371 (1), b= 12.497 (2), c= 15.313 (2) ${\AA},\;{\alpha}= 93.74\;(2),\;{\beta}=99.32\;(1),\;{\gamma}=90.17\;(1)^{\circ},\;V=1765.7\;(2)\;{\AA}^3$, Z=4, $D_m=1.461\;gcm^{-1},\;{\lambda}(Cu\;K{\alpha})=1.5418\;{\AA},\;{\mu}=40.1\;cm^{-1}$, F(000)=808, T=296 K. The structure was solved by the heavy atom and difference Fourier methods with intensity data measured on an automated four-circle diffractometer. The structure was refined by the full-matrix least-squares method to a final R= 0.081 for 3563 observed $[I_0{\geq}2{\sigam}(I_0)]$ reflections. The four independent molecules assume different overall conformations with systematically different orientations of the phenyl groups although the penam moieties have the same closed conformations. There are intramolecular hydrogen bonds between the exocyclic amide nitrogen and phenoxy oxygen atoms. The penam moiety is conformationally very restricted although the carboxyl and exocyclic amide groups apparently have certain rotational degrees of freedom but the phenyl group is flexible about the ether bond despite the presence of the intramolecular N-H${\cdots}$O hydrogen bond. There are complicated pseudo symmetric relationships in the crystal lattice. The penam moieties are related by pseudo 20.5 screw axes and the phenyl groups by pseudo centers of symmetry. The potassium ions, related by both pseudo symmetries, form an infinite zigzag planar chain parallel to the b axis. Each potassium ion is coordinated to seven oxygen atoms in a severely distorted pentagonal bipyramid configuration, forming the infinite hydrophilic channels which in turn form the molecular stacks. Between these stacks, there are only lipophilic interactions involving the phenyl groups.

Multiscale bending and free vibration analyses of functionally graded graphene platelet/ fiber composite beams

  • Garg, A.;Mukhopadhyay, T.;Chalak, H.D.;Belarbi, M.O.;Li, L.;Sahoo, R.
    • Steel and Composite Structures
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    • 제44권5호
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    • pp.707-720
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    • 2022
  • In the present work, bending and free vibration analyses of multilayered functionally graded (FG) graphene platelet (GPL) and fiber-reinforced hybrid composite beams are carried out using the parabolic function based shear deformation theory. Parabolic variation of transverse shear stress across the thickness of beam and transverse shear stress-free conditions at top and bottom surfaces of the beam are considered, and the proposed formulation incorporates a transverse displacement field. The present theory works only with four unknowns and is computationally efficient. Hamilton's principle has been employed for deriving the governing equations. Analytical solutions are obtained for both the bending and free vibration problems in the present work considering different variations of GPLs and fibers distribution, namely, FG-X, FG-U, FG-Λ, and FG-O for beams having simply-supported boundary condition. First, the matrix is assumed to be strengthened using GPLs, and then the fibers are embedded. Multiscale modeling for material properties of functionally graded graphene platelet/fiber hybrid composites (FG-GPL/FHRC) is performed using Halpin-Tsai micromechanical model. The study reveals that the distributions of GPLs and fibers have significant impacts on the stresses, deflections, and natural frequencies of the beam. The number of layers and shape factors widely affect the behavior of FG-GPL-FHRC beams. The multilayered FG-GPL-FHRC beams turn out to be a good approximation to the FG beams without exhibiting the stress-channeling effects.

Fluoxymesterone, $C_{20}H_{29}FO_3$의 결정구조 (The Crystal Structure of Fluoxymesterone, $C_{20}H_{29}FO_3$)

  • 김의성;박권일;조성일
    • 한국결정학회지
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    • 제4권1호
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    • pp.6-10
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    • 1993
  • 11 β ,17 β -dihydroxy-9a-fluoro-l7a-methyl androst-4-en-3-one (Fluoxymesterone), CgoH29 FO,, orthorhombic, P2,2,2,, a=13.468(5) A, b= 19.554 (2)A, c=6.578(9)A, a=b=r=90˚, A (CuKa)=1.5406 A , Dm=1.289cm-3, Dc=1.299cm-3 and Z=4 at T=298k. The structure was solved by direct method using seminvariants of ggg Parity group and refined by the full-matrix least-square method, resulting model with reliability factor R=0.069 for 1098 unique reflection over 3σ . Ring A is an 1β-2a-half chair, 5 ring has a highly symmetrical chair conformation, C ring is in a distorted chair conformation and D ring is a 13aenveLope conformation. In the crystal structure, the molecules are packed with a hydrogen bond of 011-H23‥‥03(0.5+x, 1.5-y, 1.0-z) [1.94(9) A of H‥‥0.2.786(9)A of 0‥‥0 and 165(8) ˚ of

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304 스테인레스강에서 첨가원소에 따른 미세조직 및 절삭성 연구 (Microstructure and Machinability with Alloying Elements in the 304 Stainless Steel)

  • 강석순;김현철;이재현;조종래;정윤교;장철호;황호순
    • 한국재료학회지
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    • 제16권9호
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    • pp.584-591
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    • 2006
  • To enhance the machinability of the austenite stainless alloys, Mn and S were added to form MnS in the austenite matrix. Recently, Ca is also added to increase machinability. The alloying elements, such as C, Mn, S, Ca, and Al, are known to affect machinability, but those roles are not well understood. In this study, the ingots, controlled of alloying elements, C, Mn, S, Ca, Al, were prepared in the 304 stainless steel. The relationship between microstructure and machinability was compared to understand the role of alloying elements. It was proved that Mn and S enhanced machinability but C reduced it by analyzing cutting force on machining in the lathe. The alloying elements, Ca and Al, made a complex oxide compound of Mn-S-Ca-Al-Si-O, which results in increasing tool life. The ferrite volume fraction was changed with alloying elements and the effect of the ferrite fraction on machining was also discussed.

$Ca^{2+}$ 이온과 $Cs^+$ 이온으로 치환되고 탈수된 두개의 제올라이트 X $Ca_{35}Cs_{22}Si_{100}Al_{92}O_{384}$$Ca_{29}Cs_{34}Si_{100}Al_{92}O_{384}$의 결정구조 (Crystal Structures of Full Dehydrated $Ca_{35}Cs_{22}Si_{100}Al_{92}O_{384}$and $Ca_{29}Cs_{34}Si_{100}Al_{92}O_{384}$)

  • 장세복;송승환;김양
    • 대한화학회지
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    • 제40권6호
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    • pp.427-435
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    • 1996
  • $Ca^{2+}$ 이온과 $Cs^+$ 이온으로 치환되고 완전히 탈수된 제올라이트 X, $Ca_{35}Cs_{22}Si_{100}Al_{92}O_{384}$($Ca_{35}Cs_{22}$-X; a=25.071(1) $\AA)와Ca_{29}Cs_{34}Si_{100}Al_{92}O_{384}$($Ca_{29}Cs_{34}$-X; a=24.949(1) $\AA)$의 두 개의 결정 구조를 $21^{\circ}C$에서 입방공간군 Fd3을 사용하여 단결정 X-선 회절법으로 해석하고 구조를 정밀화하였다. 탈수한 $Ca_{35}Cs_{22}$-X의 구조를 Full-matrix 최소자승법 정밀화 계산에서 $I>3\sigma(I)$인 322개의 독립 반사를 사용하여 최종 오차 인자를 $R_1$=0.051, $R_2$=0.044까지 정밀화 계산하였고, 탈수한 $Ca_{35}Cs_{22}$-X의 구조는 260개의 독립 반사를 사용하여 $R_1$=0.058, $R_2$=0.055까지 정밀화시켰다. 이들 구조에서 $Ca^{2+}$ 이온과 $Cs^+$ 이온은 서로 다른 5개의 결정학적 자리에 위치하고 있다. 탈수한 $Ca_{35}Cs_{22}$-X 구조에서는 16개의 $Ca^{2+}$ 이온은 D6R의 중심, 자리 I에 모두 채워져 있다(Ca-O=2.41(1) $\AA$, $O-Ca-O=93.4(3)^{\circ}).$ 다른 19개의 $Ca^{2+}$ 이온은 자리 II에 (Ca-O=2.29(1) $\AA$, $O-Ca-O=118.7(4)^{\circ})$, 10개의 $Cs^+$ 이온은 큰 공동에서 6-링 맞은편 II에 채워져 있고, 각각 3개의 산소로 만들어지는 산소 평면으로부터 $1.95\AA$ 들어가 위치하고 $있다(Cs-O=2.99(1)\AA$, $O-Cs-O=82.3(3)^{\circ}).$ 3개의 $Cs^+$ 이온은 산소 평면에서 소다라이트 공동쪽으로 $2.27\AA$ 들어간 자리 II'에서 위치하고 $있다(Cs-O=3.23\AA$, $O-Cs-O=75.2(3)^{\circ}).$ 나머지 9개의 $Cs^+$ 이온은 각각 큰 공동내 2회 회전축을 가지고 있는 48(f) 위치인 자리 III에 통계학적으로 분포하고 $있다(Cs-O=3.25(1)\AA$, Cs-O=3.49(1) $\AA).$ 탈수한 $Ca_{29}Cs_{34}$-X에서 16개의 $Ca^{2+}$ 이온은 자리 I에 채워지고 (Ca-O=2.38(1) $\AA$, $O-Ca-O=94.1(4)^{\circ})$ 13개의 $Ca^{2+}$ 이온은 자리 II에 채워져 있다(Ca-O=2.32(2) $\AA$, $O-Ca-O=119.7(6)^{\circ}).$ 다른 12개의 $Cs^+$ 이온은 자리 II에 채워져 있고, 이들은 산소 평면으로부터 각각 $1.93\AA$ 들어가 위치하고 $있다(Cs-O=3.02(1)\AA$, $O-Cs-O=83.1(4)^{\circ}).$ 7개의 $Cs^+$ 이온은 각각 자리 II'에 위치하고 있고, 산소 평면으로부터 소다라이트 공동으로 $2.22\AA$ 들어가 위치하고 있다(Cs-O=3.21(2) $\AA$, $O-Cs-O=77.2(4)^{\circ}).$ 나머지 16개의 $Cs^+$ 이온은 큰 공동내의 자리 III에 있다(Cs-O=3.11(1) $\AA$, Cs-O=3.46(2) $\AA).Ca^{2+}$ 이온은 자리 I과 자리 II에 우선적으로 위치하고 $Cs^+$ 이온은 너무 커서 자리 I에 채워질 수 없으며 나머지 자리에 채워진다.

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Hf 도핑된 BaTiO3 나노입자 기반의 플렉서블 압전 소자 개발 및 특성평가 (Development and Characterization of Hafnium-Doped BaTiO3 Nanoparticle-Based Flexible Piezoelectric Devices)

  • 장학수;박현준;김광현;이경자;지재훈;이동훈;정영화;이민구;백창연;박귀일
    • 센서학회지
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    • 제33권1호
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    • pp.34-39
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    • 2024
  • Energy harvesting technology that converts the wasted energy resources into electrical energy is emerging as a semipermanent power source for self-powered electronics and wireless low-power sensor systems. Among the various energy conversion techniques, flexible piezoelectric energy harvesters (f-PEHs), using materials with piezoelectric effects, have attracted significant interest because they can harvest a small mechanical energy into electrical signals without constraints of time and space in various environments. In this study, we used a flexible piezoelectric composite film fabricated by dispersing BaHfxTi(1-x)O3 (x = 0, 0.01, 0.05, 0.1) piezoelectric powders inside a polymeric matrix to facilitate f-PEHs. The fabricated f-PEH with optimal Hf contents (x = 0.05) generated a maximum output voltage of 0.95 V and current signal of 130 nA with stable electrical/mechanical disabilities under periodically bending deformations. In addition, we demonstrated a cantilever-type f-PEH and investigated its potential as a sensor by characterizing the output performance under mechanical vibrations at various frequencies. This study provides the breakthrough for realizing self-powered energy harvesting and sensing systems by adopting the lead-free piezoelectric composites under vibrational environments.