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Development of TaqMan probe-based real-time PCR for rapid identification of beef, pork and poultry meat (소, 돼지, 가금육류의 신속한 동정을 위한 TaqMan probe를 이용한 real-time PCR 개발)

  • Koh, Ba-Ra-Da;Kim, Ji-Yeon;Na, Ho-Myung;Park, Seong-Do;Kim, Yong-Hwan
    • Korean Journal of Veterinary Service
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    • v.35 no.3
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    • pp.215-222
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    • 2012
  • Species-specific $TaqMan^{(R)}$ probe-based real-time PCR assays were developed for detection of beef, pork, chicken, duck, goose and turkey. The primer and probe sets used in this study were designed to be complementary to fibroblast growth factor (FGF) for cattle and pig, mitochondrial NADH dehydrogenase (ND) subunit 3 and ND2 for chicken and duck, 12S rRNA for goose and turkey, respectively. As internal positive control we used conserved region in the ribosomal 18S RNA gene to ensure the accuracy of the detection of target DNA by real-time PCR. We confirmed that real-time PCR assays with the primer and probe sets were positive for cattle, pig and chicken intended target animal species with no cross-reactivity with other non-target animal species. Only >50 ng DNA of beef show cross-reactivity in the determination of duck. Using species-specific primer and probe sets, it was possible to detect amounts of 0.1 ng DNA of cattle and pig, 1.0 pg DNA of chicken, duck and turkey, and 0.1 pg DNA of goose for raw samples, respectively. The detection limits were 0.1 ng DNA of cattle, 1.0 ng DNA of pig and 1.0 pg DNA of chicken for DNA mixtures (beef, pork and chicken) extracted from heat-treated ($121^{\circ}C$/5 min) meat samples. In conclusion, it can be suggested that the $TaqMan^{(R)}$ probe-based assay developed in this study might be a rapid and specific method for the identification of meat species in raw or cooked meat products.

Assessment of sediment and total phosphorous loads using SWAT in Oenam watershed, Hwasun, Jeollanam-do (SWAT 모델을 이용한 외남천 유역의 토사 및 총인 유출량 분석)

  • Lee, Taesoo
    • Journal of the Korean association of regional geographers
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    • v.22 no.1
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    • pp.240-250
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    • 2016
  • Monitoring for water quantity and quality was conducted in this study for 2 years (2012~2013) in Oenam Stream which is a tributary of Seomjin River and upstream of Juam Lake. Suspended solid and total phosphorous(TP) were monitored and analyzed, then water quantity and quality as well as their relation with landuses were identified based on the previous study. Flow showed the similar pattern with precipitation but some discrepancies existed due to the distance between weather station(Gwangju) and study area. Watershed was modeled based on observed data using SWAT(Soil and Water Assessment Tool). Model calibration was conducted using data obtained in 2012 and validation was conducted using data in 2013. The coefficient of determination ($R^2$) between observed and modeled showed 0.6644 and 0.5176 for flow and TP, respectively for model calibration period. For validation period, $R^2$ was 0.7529 for flow and 0.7057 for TP, which were higher than calibration period. Hot spots were determined for watershed management by analyzing the amount of sediment and TP outcome from each sub-watershed. TP loading by landuse determined that cropland, of which the area takes only 5% from entire watershed, generated 53.6% of TP and residential and cowshed was responsible for 23.5% of TP loading.

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Determination of 3-phenoxybenzoic Acid in Urine and Exposure Assessment of Pyrethroid Insecticides to Human Being (요중 3-phenoxybenzoic acid 미량 분석 및 pyrethroid계 살포자 노출 평가)

  • Seo, Jong-Chul;Song, Jae-Seok;Choi, Hong-Soon
    • The Korean Journal of Pesticide Science
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    • v.11 no.2
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    • pp.87-94
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    • 2007
  • Pyrethroid insecticide have widely been used for agricultural sector and residential environments. To assess the exposure of insecticide which is absorbed through skin the analysis of urinary metabolite is essential. At present, the urinary 3-PBA was analyzed using liquid-phase extraction. But LPE have many limitations, such as long pre-treatment time and low recovery. So, this study was conducted to determine the optimum conditions for analysing 3-PBA in urine using solid phase extraction. Furthermore, this study intend to investigate the relation of concentrations of pyrethroid, deltamethrin in air and 3-PBA in urine. The optimum condition for hydrolysis was found to be done with hydrochloric acid for one hour. The recovery rates of 3-PBA were $84.6%{\pm}1.2%$, $54.8{\pm}0.9%$, $99.8{\pm}1.2%$ with XAD-2, XAD-7, XAD-16 using as the aborbents and acetone as eluents respectively. But acetonitrle and methanol gave low recovery rate and methyl cellosolve could not elute the compound. The amount of acetone for elution were 6mL, 9mL, 3mL for XAD-2, XAD-7, XAD-16 as absorbents respectively. The non-absorbed rates was $0.8{\pm}0.5%$, and $0.7{\pm}0.3%$ under XAD-16, mesh size 140-200, amount of resin 1.4g and the flow rate of eluent was 0.1mL/min. In the concentration process, we obtained 11 times higher concentration of material. The amounts of urinary 3-PBA were. The LODs of 3-PBA and deltamethrin were 0.004 mg/L, 0.038 mg/L, respectively. The further research of minute monitoring which include spray pattern, environmental condition is needed And more research about the relation between total pyrethroid exposure and urinary various metabolite are also necessary.

Estimation of the Regional Future Sea Level Rise Using Long-term Tidal Data in the Korean Peninsula (장기 조위자료를 이용한 한반도 권역별 미래 해수면 상승 추정)

  • Lee, Cheol-Eung;Kim, Sang Ug;Lee, Yeong Seob
    • Journal of Korea Water Resources Association
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    • v.47 no.9
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    • pp.753-766
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    • 2014
  • The future mean sea level rise (MSLR) due to climate change in major harbors of Korean Peninsula has been estimated by some statistical methods in this article. Firstly, Mann-Kendall non-parametric trend test to find some trend in the observed long-term tidal data has been performed and also Bayesian change point analysis has been used also to detect the location of change points and their magnitude quantitatively. Especially, in this study, the results from Bayesian change point analysis have been applied to combine 4 future MSLR scenario projections with local MSLR data at 5 tidal gauges. This proposed procedure including Bayesian change point analysis results can improve the step for the determination of starting years of future MLSR scenario projections with 18.6-year lunar node tidal cycle and effectively consider local characteristics at each gauge. The final results by the proposed procedure in this study have shown that the future MSLR in Jeju region (Jeju tidal gauge) is in the largest increment and also the future MSLRs in Western region (Boryeong tidal gauge) and Southern region (Busan tidal gauge) are in the second largest one. Finally, it has been shown that the future MSLRs in Southern region (Yeosu tidal gauge) and Eastern region (Sokcho tidal gauge) seem to be in the relatively smallest growth among 5 gauges.

The Joint Determination of Leverage and Debt Maturity (레버리지와 부채만기 결정의 상호관계)

  • Kim, Chi-Soo;Kwon, Kyeung-Taek
    • The Korean Journal of Financial Management
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    • v.22 no.1
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    • pp.1-36
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    • 2005
  • In this study, we analyzed determinant factors of leverage ratio and debt maturity for Korean firms in the simultaneous equation system using 2SLS (two stage least square) method under assumption that two variables are jointly determined in the capital structure decision. As a result of the analysis, we found that leverage ratio and debt maturity are positively related. Also, as for determinant factors of debt maturity, agency cost hypothesis, asset maturity matching hypothesis, signalling and liquidity risk hypothesis are all generally supported, and further leverage ratio are significantly positively related with firm size, but negatively related with default risk. However, when we divided samples into groups according to bank debt level and Chaebul affiliation, with contrast to existing study which worked on similar issues with OLS, we found no evidence supporting the argument that the information asymmetry problem is less severe in firms with more bank debt, whereas information asymmetry and financial constraint problems are more severe in non-Chaebul affiliated firms.

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A Case of Erdheim-Chester Disease Who Has Policythemia Vera (진성 적혈구증다증 환자에서 발현한 Erdheim-Chester Disease 1예)

  • Kim, Ji Eun;Lee, Hyun Jeong;Rhee, Chin Kook;Yoon, Hyung Kyu;Song, Jeong Sup
    • Tuberculosis and Respiratory Diseases
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    • v.64 no.3
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    • pp.224-229
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    • 2008
  • Erdheim-Chester disease (ECD) is a rare disease that is characterized by multi-organ involvement of foamy histiocytes. It causes systemic inflammation, and also demonstrates various clinical manifestations and has a poor prognosis. We encountered a case of ECD in a patient that had been treated for underlying polycythemia vera. As far as we know, this is the first reported case worldwide where ECD developed in association with polycythemia vera. A 59-year-old man visited our hospital due to pleuric pain at the right side of the chest. Pleural tissue that was obtained following a thoracoscopic biopsy showed non-Langerhan's cell histiocytosis, suggesting the presence of ECD. The histiocytes stained positively for CD68, but were negative for S-100 and CD1a. The patient also complained of pain at both hips and the right shoulder area. An X-ray and magnetic resonance image demonstrated that the lesion showed sclerosis and osteolysis in both the proximal femur and right humerus. Treatment was started with predinisolone, and subsequently cyclophosphamide was added. ECD is a very rare multi-systemic disease, and its cause and therapeutic options have not yet been defined. ECD has a poor prognosis. Therefore, we believe that additional case studies are needed prior to the determination of a novel therapy for ECD.

A Study on the Systematic Integration of WASP5 Water Quality Model with a GIS (GIS와 WASP5 수질모델의 유기적 통합에 관한 연구)

  • 최성규;김계현
    • Spatial Information Research
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    • v.9 no.2
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    • pp.291-307
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    • 2001
  • In today's environmental engineering practice, many technologies such as GIS have been adopted to analyze chemical and biological process in water bodies and pollutants movements on the land surface. However, the linkage between spatially represented land surface pollutants and the in-stream processes has been relatively weak. This lack of continuity needs to develop a method in order to link the spatially-based pollutant source characterization with the water quality modeling. The objective of this thesis was to develop a two-way(forward and backward) link between ArcView GIS software and the USEPA water quality model, WASP5. This thesis includes a literature review, the determination of the point source and non-point source loadings from WASP5 modeling, and the linkage of a GIS with WASP5 model. The GIS and model linkage includes pre-processing of the input data within a GIS to provide necessary information for running a model in the forms of external input files. The model results has been post-processed and stored in the GIS database to be reviewed in a user defined form such as a chart, or a table. The interface developed from this study would provide efficient environment to support the easier decision making form water quality management.

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Quantitative Analysis of Quadrupole Noise Sources upon Quick Opening The Throttle (쓰로틀밸브 급개방시 기류소음의 4극음원에 대한 정량적 해석)

  • Kim Jaeheon;Cheong Cheolung;Kim SungTae;Lee Soogab
    • Proceedings of the Acoustical Society of Korea Conference
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    • spring
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    • pp.469-474
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    • 2002
  • In recent years, modularization of engine parts has increased the application of plastic products in air intake systems. Plastic intake manifolds provide many advantages including reduced weight, contracted cost, and lower intake air temperatures. These manifolds, however, have some weakness when compared with customary aluminium intake manifolds, in that they have low sound transmission loss because of their lower material density. This low transmission loss of plastic intake manifolds causes several problems related to flow noise, especially when the throttle is opened quickly. The physical processes, responsible for this flow noise, include turbulent fluid motion and relative motion of the throttle to the airflow. The former is generated by high-speed airflow in the splits between the throttle valve and the inner-surface of the throttle body and surge-tank, which can be categorized into the quadrupole source. The latter induces the unsteady force on the flow, which can be classified into the dipole source. In this paper, the mechanism of noise generation from the turbulence is only investigated as a preliminary study. Stochastic noise source synthesis method is adopted for the analysis of turbulence-induced, i.e. quadrupole noise by throttle at quick opening state. The method consists of three procedures. The first step corresponds to the preliminary time-averaged Navier-Stokes computation with a $k-\varepsilon$ turbulence model providing mean flow field characteristics. The second step is the synthesis of time-dependent turbulent velocity field associated with quadrupole noise sources. The final step is devoted to the determination of acoustic source terms associated with turbulent velocity. For the first step, we used market available analysis tools such as STAR-CD, the trade names of fluid analysis tools available on the market. The steady state flows at three open angle of throttle valve, i.e. 20, 35 and 60 degree, are numerically analyzed. Then, time-dependent turbulent velocity fields are produced by using the stochastic model and the flow analysis results. Using this turbulent velocity field, the turbulence-originated noise sources, i.e. the self-noise and shear-noise sources are synthesized. Based on these numerical results, it is found that the origin of the turbulent flow and noise might be attributed to the process of formulation and the interaction of two vortex lines formed in the downstream of the throttle valve. These vortex lines are produced by the non-uniform splits between the throttle valve and inner cylinder surface. Based on the analysis, we present the low-noise design of the inner geometry of throttle body.

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Hydrologic and Environmental Assessment of an Infiltration Planter for Roof Runoff Use (지붕 빗물이용을 위하여 개발된 침투화분의 환경·수문학적 평가)

  • Moon, So-Yeon;Choi, Ji-Yeon;Hong, Jung-Sun;Yu, Gi-Gyung;Jeon, Je-Chan;Flores, Precious Eureka D.;Kim, Lee-Hyung
    • Journal of Wetlands Research
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    • v.17 no.4
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    • pp.325-331
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    • 2015
  • Due to urbanization and increase in impervious area, changes in natural water circulation system have become a cause of groundwater recharge reduction, streamflow depletion and other hydrological problems. Therefore, this study developed the infiltration planter techniques applied in an LID facility treating roof stormwater runoff such as, performance of small decentralized retention and infiltration through the reproduction of natural water circulation system and use of landscape for cleaning water. Assessment of an infiltration planter was performed through rainfall monitoring to analyze the water balance and pollutant removal efficiency. Hydrologic assessment of an infiltration planter, showed a delay in time of effluent for roof runoff for about 3 hours and on average, 79% of facilities had a runoff reduction through retention and infiltration. Based on the analysis, pollutant removal efficiency generated in the catchment area showed an average of 97% for the particulate matter, 94% for the organic matter and 86-96% and 92-93% for the nutrients and heavy metals were treated, respectively. Comparative results with other LID facilities were made. For this study, facilities compared the SA/CA to high pollutant removal efficiency for the determination to of the effectiveness of the facility when applied in an urban area.

Determination of EMCs for Rainfall Ranges from Transportation Landuses (교통관련 토지이용에서의 강우계급별 EMC 산정)

  • Lee, So-Young;Maniquiz, Marla C.;Choi, Ji-Yeon;Kim, Lee-Hyung
    • Journal of Wetlands Research
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    • v.11 no.2
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    • pp.67-76
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    • 2009
  • The contribution of pollutant loadings from non-point source (NPS) to the four major rivers in Korea exceeded 22~37 % of the total loadings in 2004 and is expected to reach 60 % in 2020. Most of NPS loadings are coming from urban areas, especially from paved areas. Because of high imperviousness rate, many types of NPS pollutant are accumulating on the surface during dry periods. The accumulated pollutants are wash-off during a storm and highly degrading the water quality of receiving water bodies. For this reason, the Korean Ministry of Environment (MOE) developed the Total Maximum Daily Load (TMDL) program to protect the water quality by managing the point source and NPS loadings. NPS has high uncertainties during a storm because of the characteristics of rainfall and watershed areas. The rainfall characteristics can affect on event mean concentrations (EMCs), mass loadings, flow rate, etc. Therefore, this research was performed to determine EMCs for rainfall ranges from transportation landuses such as road and parking lot. Two sites were monitored over 45 storm events during the 2006/06 through 2008/10 storm seasons. Mean TSS EMCs decrease as rainfall ranges increase and highest at less than 10mm rainfall. The results of this study can be used to determine the efficient scale of BMP facility considering specific rainfall range.

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