• ALGAE
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• v.34 no.3
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• pp.199-216
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• 2019

Platysiphon verticillatus and Punctaria glacialis are synonymized by mainly on the basis of shared genes, nine identical sequences. Our hypothesis is that synonymy is erroneous. We posit the many differences of biological features between the two species, their ecological preferences, and occurrences do not support synonymy. Arcticophycus (nov. gen.) is described and contains the new combination Arcticophycus glacialis. Asexual, vegetative, life histories are proposed. Novel reproductive structures are described including previously unknown features of thallus development in the life history of both species. Discovery of the novel Platysiphon cyst, and dual sporangia types in Arcticophycus, is critical in establishing a probable strategy for survival through the Arctic winter for each annual species. Pl. verticillatus is erect, tubular, ovoid to circular in X sections, flaccid, non-parenchymatous, light brown, 10-15 cm high with distinctive photosynthetic hairs in clusters or whorled on the upper one third of the thallus. A. glacialis is erect, planar, robust, parenchymatous, dark brown and hairs absent. The Halosiphon clade is named, consisting of four genera: Halosiphon, Platysiphon, Arcticophycus, and Stschapovia. Occurrence of these genera is identified. Emended are the genus Platysiphon, the family Platysiphonaceae and the order Stschapoviales.

• Journal of Ginseng Research
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• v.43 no.2
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• pp.172-178
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• 2019

Inflammation is an innate immune response that protects the body from pathogens, toxins, and other dangers and is initiated by recognizing pathogen-associated molecular patterns or danger-associated molecular patterns by pattern-recognition receptors expressing on or in immune cells. Intracellular pattern-recognition receptors, including nucleotide-binding oligomerization domain-like receptors (NLRs), absent in melanoma 2, and cysteine aspartate-specific protease (caspase)-4/5/11 recognize various pathogen-associated molecular patterns and danger-associated molecular patterns and assemble protein complexes called "inflammasomes." These complexes induce inflammatory responses by activating a downstream effector, caspase-1, leading to gasdermin D-mediated pyroptosis and the secretion of proinflammatory cytokines, such as interleukin $(IL)-1{\beta}$ and IL-18. Ginsenosides are natural steroid glycosides and triterpene saponins found exclusively in the plant genus Panax. Various ginsenosides have been identified, and their abilities to regulate inflammatory responses have been evaluated. These studies have suggested a link between ginsenosides and inflammasome activation in inflammatory responses. Some types of ginsenosides, including Rh1, Rg3, Rb1, compound K, chikusetsu saponin IVa, Rg5, and Rg1, have been clearly demonstrated to inhibit inflammatory responses by suppressing the activation of various inflammasomes, including the NLRP3, NLRP1, and absent in melanoma 2 inflammasomes. Ginsenosides have also been shown to inhibit caspase-1 and to decrease the expression of $IL-1{\beta}$ and IL-18. Given this body of evidence, the functional relationship between ginsenosides and inflammasome activation provides new insight into the understanding of the molecular mechanisms of ginsenoside-mediated antiinflammatory actions. This relationship also has applications regarding the development of antiinflammatory remedies by ginsenoside-mediated targeting of inflammasomes, which could be used to prevent and treat inflammatory diseases.

• Journal of Species Research
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• v.8 no.2
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• pp.191-196
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• 2019

In 2015 and 2017, the National Institute of Biological Resources has isolated four unrecorded prokaryotic species designated as R-1-5, R-2-13, R-2-1, and R-1-8 from the peatland soil of Yongneup. Phylogenetic analysis based on 16S rRNA gene sequence similarity determined the four strains (R-1-5, R-2-13, R-2-1, R-1-8) were most closely related to Curvibacter lanceolatus (99.93%), Massilia brevitalea (98.7%), Pseudomonas lini (99.54%), and Pseudomonas vancouverensis (99.93%), respectively. The four unrecorded strains belong to the phylum Proteobacteria, in which the genera Curvibacter and Massilia are assigned to the class Betaproteobacteria, and the genus Pseudomonas to the class Gammaproteobacteria. Since there are no publications or official reports on these four strains, these four species are new records to Korea. The strains were further characterized by Gram reaction, colony and cell morphology, basic biochemical properties, and phylogenetic position. Descriptive information of the four unrecorded species is provided.

• Korean journal of applied entomology
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• v.60 no.3
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• pp.331-334
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• 2021

A cosmopterigid species, Alloclita mongolica Sinev is reported for the first time from Korea. This is the first record of the genus Alloclita Staudinger for the Korean fauna and the southernmost records of A. mongolica. The collecting data of the species in Korea suggest a habitat association of A. mongolica with coastal sand-dunes. The features of external appearance and male genitalia are described and illustrated for this rare species.

• Mycobiology
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• v.49 no.4
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• pp.421-433
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• 2021

Morchella is a genus of fungi with the ability to concentrate Cd both in the fruit-body and mycelium. However, the molecular mechanisms conferring resistance to Cd stress in Morchella are unknown. Here, RNA-based transcriptomic sequencing was used to identify the genes and pathways involved in Cd tolerance in Morchella spongiola. 7444 differentially expressed genes (DEGs) were identified by cultivating M. spongiola in media containing 0.15, 0.90, or 1.50 mg/L Cd²⁺. The DEGs were divided into six sub-clusters based on their global expression profiles. GO enrichment analysis indicated that numerous DEGs were associated with catalytic activity, cell cycle control, and the ribosome. KEGG enrichment analysis showed that the main pathways under Cd stress were MAPK signaling, oxidative phosphorylation, pyruvate metabolism, and propanoate metabolism. In addition, several DEGs encoding ion transporters, enzymatic/non-enzymatic antioxidants, and transcription factors were identified. Based on these results, a preliminary gene regulatory network was firstly proposed to illustrate the molecular mechanisms of Cd detoxification in M. spongiola. These results provide valuable insights into the Cd tolerance mechanism of M. spongiola and constitute a robust foundation for further studies on detoxification mechanisms in macrofungi that could potentially lead to the development of new and improved fungal bioremediation strategies.

• Korean Journal of Fisheries and Aquatic Sciences
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• v.53 no.6
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• pp.960-964
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• 2020

For the first time, a single specimen (68.47 mm in total length) of Lumpenopsis pavlenkoi Soldatov, 1916 belonging to the family Stichaeidae was collected from the northernmost area of the eastern coast of Korea (Gosung, Gangwon Province) in April, 2020, using square net (1.0 m width, 0.3 m height, 2.0 mm mesh size). This species is characterized by elongated and compressed body, absence of lateral line and cirri on head, presence of scales on cheek, dorsal fin with only 50 spines, anal fin with 2 spines and 30 soft rays, and separated operculum and isthmus. The body is yellowish with 7 saddles. The new Korean name "Kko-ma-be-do-ra-chi-sog" is proposed for the genus Lumpenopsis, and "Deung-jeom-kko-ma-be-do-ra-chi" is proposed for the species L. pavlenkoi.

• Animal Systematics, Evolution and Diversity
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• v.37 no.3
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• pp.255-272
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• 2021

Etymologies are explanations of what our words meant and how they sounded 600 to 2,000 years ago. When Linnaeus in the mid-1700s began naming animals with a binomial nomenclature, he based names on the Latin Grammatical Form. Since many names have Latin or Greek roots, the name for an animal is the same throughout the world because Latin is no longer a spoken language and meanings of names will not evolve or change. In his use of Latin or a Latinized word for the genus and species, Linnaeus used descriptive words that will always be the same. Notwithstanding the importance of etymologies for scientific names, no study has addressed the etymology of scientific names for Korean mammals. Here, we list etymologies for scientific names of 127 mammal species, 84 genera, 32 families, and 8 orders from Korea. The origins of etymologies are mostly based on morphology, color of pelage, behavior, distribution, locality, country name, or a person's name. This paper will be useful for new students and trained scholars studying Korean mammals.

• Fisheries and Aquatic Sciences
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• v.24 no.6
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• pp.228-234
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• 2021

A single specimen (39.4 mm standard length) of Brachaluteres ulvarum, belonging to the family Monacanthidae has been recorded for the first time from Supseom, Jeju-do Island of southern Korea on 6 March 2021. This species was characterized by the presence of a small second dorsal spine present, the posterior end of pelvic without encasing scales, and numerous thin dark longitudinal lines on body. It was morphologically similar to the B. taylori, but distinguished by the ratio of the caudal peduncle to the head length (B. ulvarum, 2.5 to 3.7 times; B. taylori, 3.5 to 5.2 times). In addition, the former is well distinguished from the latter through mitochondrial cytochrome c oxidase subunit I (COI) sequences by genetic distances of range from 0.088 to 0.090. The new Korean name "Kko-ma-jwi-chi- sog" is proposed for the genus Brachaluteres, and "Kko-ma-jwi-chi" for the species B. ulvarum.

• Research in Plant Disease
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• v.27 no.1
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• pp.24-31
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• 2021

Since the past few years, dimple rot has become one of the most serious diseases affecting Actinidia chinensis var. chinensis 'Zesy002' kiwifruit in Korea, leading to a low quality and subsequent losses of income. In the current study, the causal pathogen of side rot on 'Zesy002' kiwifruit was identified to be Botryosphaeria dothidea, a widespread pathogen that could penetrate the fruit directly without wounding. Diaporthe sp., another pathogen causing dimple rot, was isolated from infected kiwifruit. It was not able to infect fruits without wounding. Dimple-rot symptoms are known to be associated with other pathogens from the Pseudocercospora genus. In this study, B. dothidea was ratified as the causal disease agent in Jeju Island. To illustrate the pathogenicity of this fungus on 'Zesy002', further studies such as observation of infection structures of fungus may be needed.

• Journal of Ecology and Environment
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• v.45 no.4
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• pp.170-173
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• 2021

Background: The Slender racer (Orientocoluber spinalis Peters, 1866) has recently been reclassified to the new genus Orientocoluber from Hierophis. Ecological knowledge of this species is limited due to its highly mobile behavior. On 17 July 2020, we captured a female O. spinalis on Oeyeon Island, Boryeong-si, Republic of Korea, and collected its feces for a diet analysis. We observed snake scales from the collected feces and subsequently determined the prey species through morphological and molecular methods. Results: We initially hypothesized that the extracted fecal sample scales belonged to H. vibakari, due to their thin keel and rhombus shape. We also amplified H. vibakari DNA from the extracted fecal sample using Illumina sequencing methods. Our morphological and molecular results suggest that O. spinalis predates H. vibakari on Oeyeon Island. Conclusion: This is the first report of O. spinalis predating another snake species, ophiophagy, and implies that H. vibakari may be a crucial prey item for O. spinalis on Oeyeon Island.