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Protein Named Entity Identification Based on Probabilistic Features Derived from GENIA Corpus and Medical Text on the Web

  • Sumathipala, Sagara;Yamada, Koichi;Unehara, Muneyuki;Suzuki, Izumi
    • International Journal of Fuzzy Logic and Intelligent Systems
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    • v.15 no.2
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    • pp.111-120
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    • 2015
  • Protein named entity identification is one of the most essential and fundamental predecessor for extracting information about protein-protein interactions from biomedical literature. In this paper, we explore the use of abstracts of biomedical literature in MEDLINE for protein name identification and present the results of the conducted experiments. We present a robust and effective approach to classify biomedical named entities into protein and non-protein classes, based on a rich set of features: orthographic, keyword, morphological and newly introduced Protein-Score features. Our procedure shows significant performance in the experiments on GENIA corpus using Random Forest, achieving the highest values of precision 92.7%, recall 91.7%, and F-measure 92.2% for protein identification, while reducing the training and testing time significantly.

An Operation of Cloud System for the Centralization Services of Business Documents (업무문서 중앙화 서비스 제공을 위한 클라우드 시스템 운영방안)

  • Yoon, Yong;Kim, Younsung
    • Journal of Information Technology Services
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    • v.13 no.4
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    • pp.309-324
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    • 2014
  • This case study focuses on the preparing a guide for the plan to the companies that want to build a business document system for the centralized services under the cloud computing. Total 3 Operating companies with regard to cloud computing issues are introduced for this purpose. Analyzing the usage and development direction of the selected companies were performed to set up plans. Through this in-depth needs of the user's point of view for the management of business documents, The necessary improvements in the process of collaboration and document sharing were derived. Business documents centralized service plans were proposed based on cloud computing models. Practical experiences of the companies were helpful to present the details of the operational strategy and operational plans. Especially with minimal staff input and verification process, Sample method for the automatic generating of the new document file name is introduced. A test bed before operating the enterprise-wide system were presented with information that is to be considered when building systems.

A Usability Evaluation Method for Speech Recognition Interfaces (음성인식용 인터페이스의 사용편의성 평가 방법론)

  • Han, Seong-Ho;Kim, Beom-Su
    • Journal of the Ergonomics Society of Korea
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    • v.18 no.3
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    • pp.105-125
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    • 1999
  • As speech is the human being's most natural communication medium, using it gives many advantages. Currently, most user interfaces of a computer are using a mouse/keyboard type but the interface using speech recognition is expected to replace them or at least be used as a tool for supporting it. Despite the advantages, the speech recognition interface is not that popular because of technical difficulties such as recognition accuracy and slow response time to name a few. Nevertheless, it is important to optimize the human-computer system performance by improving the usability. This paper presents a set of guidelines for designing speech recognition interfaces and provides a method for evaluating the usability. A total of 113 guidelines are suggested to improve the usability of speech-recognition interfaces. The evaluation method consists of four major procedures: user interface evaluation; function evaluation; vocabulary estimation; and recognition speed/accuracy evaluation. Each procedure is described along with proper techniques for efficient evaluation.

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De Morgan's Thoughts and Pedagogics of Mathematics Education (드 모르간의 수학교육 철학과 교수법의 재조명)

  • Son, Hong-Chan;Ko, Ho-Kyoung
    • Journal for History of Mathematics
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    • v.20 no.4
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    • pp.175-190
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    • 2007
  • In the nineteenth century was Augustus De Morgan, British mathematician, a great mathematics teacher. Although his name is well known to everybody who is interested in set theory, his major mathematical legacy would arise from his novel research in logic. In this article, we first investigate De Morgan's life briefly; we then consider his precious philosophy of mathematics education based on his students' remarks and his works. Finally, by considering his teaching style, we highlight some of the ingredients that go into making a great mathematics teacher.

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One Unrecorded Species of Acanthurus nigricauda (Acanthuridae, Perciformes) from Korea (한국산 양쥐돔과 어류 1 미기록종, Acanthurus nigricauda)

  • Kim, Jin Koo;Park, Jeong-Ho;Hwang, Kang Seok
    • Korean Journal of Ichthyology
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    • v.19 no.2
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    • pp.164-167
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    • 2007
  • A single specimen (213.5 mm SL) of the epaullete surgeonfish, Acanthurus nigricauda Dunker and Mohr, belonging to the family Acanthuridae was collected by a set net in coastal waters of Busan, Korea. The species has a distinctive dark band above pectoral fin and on mid-lateral part of caudal peduncle. We describe this species as new to Korean fish fauna and propose its new Korean name, "Yang-jwi-dom".

First Record of a Carangid Fish Species, Carangoides hedlandensis (Perciformes: Carangidae), in Korean Waters

  • Lim, Young-Soo;Kang, Chung-Bae;Han, Kyeong-Ho;Myoung, Jung-Goo
    • Fisheries and Aquatic Sciences
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    • v.13 no.4
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    • pp.315-319
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    • 2010
  • A single specimen of Carangoides hedlandensis was collected from a set net installed at 25 m depth near Sangju Beach, Namhae, Gyeoksangnamdo, Korea. The morphology of the species was similar to that of C. armatus. Carangoides hedlandensis and C. armatus can be clearly distinguished by the number of gillrakers on the first arch: C. hedlandensis has 20-28 gillrakers whereas C. armatus has 30-39. Unlike other species, interorbital region of the head in C. hedlandensis is bumped. We suggest that C. hedlandensis should be added to lists of Korean fish fauna, and propose a Korean name, "Hokjeon-gaeng-i" for this species.

A Research about Compact SELCA -Rod design utilizing FreeCAD (FreeCAD를 활용한 소형 셀카봉 설계에 관한 연구)

  • Yang, Woong;Lu, Jiaqi
    • Proceeding of EDISON Challenge
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    • 2015.03a
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    • pp.538-540
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    • 2015
  • In this paper, We have conducted a Compact SELCA-Rod design by using FreeCAD. FreeCAD is many modern design applications such as Revit or CATIA. It is based on the concept of Workbench. A Workbench can be considered as a set of tools specially grouped for a certain task. Also It has an extensive list of features FreeCAD implements. We use this practical tool and proceed the research on Compact SELCA-Rod which is attracted the most IT-related products in 2014. SELCA-Rod is mostly based on rod-shaped form as in name. However rod-shaped design has the biggest problem for mobile Through this research, We propose a new type of SELCA-Rod. It is easy to carry and take pictures from different angle.

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The Design and Implementation of Class Relation Information Tool from C++ Code (C++ 코드로부터 클래스 관련 정보 생성 도구의 설계 및 구현)

  • Jang, Deok-Cheol;Park, Jang-Han
    • The Transactions of the Korea Information Processing Society
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    • v.7 no.3
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    • pp.818-830
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    • 2000
  • Automation tools for program analysis are needed in order to program understand and maintain, extract the characteristics of object-oriented program such as class name, member function and data member. In this paper, we carried out design and implementation of the automation tool for effective maintenance of object-oriented software. Being based on Reverse Engineering, this approach extracts class relationship information from C++ source code and generates object-oriented model of class diagram using UML as the standard object-oriented methodology. Therefore, this paper provides developers visualized including class information, definitions of classes, inheritance relationships, set relationships, and simple reference relationships. Finally in this paper, we propose a method that construct class relationship information to table in analysis state and make form of table construction to link form so tat developers can perform understanding and maintaining program efficiently. And this method enable to restructure and reuse in object-oriented model.

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JE JU 4.3 and "4.3 Literature" (기술사마당: 문예 - "제주(濟州) 4.3"과 "4.3 文學(문학)"-)

  • Yang, Suh-Yoon
    • Journal of the Korean Professional Engineers Association
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    • v.43 no.5
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    • pp.43-47
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    • 2010
  • The epoch-making event of history called "JE JU 4.3" took place in JE JU beautiful island on liberation political situation in 1948. The cruelties of this event were reported awful life loss over 30,000, cruel slaughter by government, scorched villages in mountain area, silence exaction and disadvantage of implication for long time over 40 years. But, the real features are in still a fog.. Recently, the searching movement has arised owing to democracy atmosphere and literature works with "JE JU4.3" materials were published from 1988 and the government announced official apologies in 2003. The novel "The Sun-set on Halla Mt", one of those works, is accessible to real history due to its time/space back ground and the real name of persons who were related with this event. It is important for readers to consider the difference between real history and fiction story. Because a historical novel should be evaluated by writer's theme rather than history character.

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Genetic Identification of the Kimchi Strain Using PCR-based PepN and 16S rRNA Gene Sequence (PepN과 16S rRNA Gene Sequence 및 PCR 방법을 이용한 김치 젖산균의 동정)

  • Lee, Myung-Ki;Park, Wan-Soo;Lee, Byong-H.
    • Korean Journal of Food Science and Technology
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    • v.32 no.6
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    • pp.1331-1335
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    • 2000
  • The WL6 strain isolated from Kimchi could not be made scientific name because it was identified as three species, i.e., Leuconostoc mesenternides ssp cremoris, Leu. mesenteroides ssp. dextranicum or Lactobacillus bifermentans when it was tested by API kit or Biolog system methods. The unidentifiable WL6 strain was finally reclassified as Lactobacillus bifermentans by genetic identification using two PCR-based specific sequence primer sets which were originated from homologous pepN and 16S rRNA genes.

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