• 한국환경생태학회지
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• 제29권4호
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• pp.599-604
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• 2015

본 연구에서는 서울시 도시 숲에 속해 있는 불암산, 대모산, 봉화산 3개 산을 대상으로 군집분석을 하였다. 불암산 군집분석 결과 소나무(Pinus densiflora)-신갈나무(Quercus mongolica), 서어나무(Carpinus laxiflora)-리기다소나무(Pinus rigida), 굴참나무(Quercus variabilis)-팥배나무(Sorbus alnifolia)로 나왔으며 대모산의 군집은 리기다소나무-일본잎깔나무(Larix leptolepis), 현사시나무(Populus tomentiglandulosa)-물박달나무(Betula davurica Pall)로 구분되었다. 봉화산의 군집분석 결과 소나무-팥배나무와 상수리나무(Quercus acutissima)-벚나무(Prunus serrulata)로 구분되었다. 불암산, 대모산, 봉화산의 지역별 유사도에서는 불암산과 대모산의 유사도 지수가 0.634로 높게 나와 비슷한 식생들이 분포하고 있으며 다른 지역보다 대모산 지역의 우점도가 0.166으로 다수의 종이 우점한다. 또한 종다양도 분석결과 대모산이 가장 안정된 상태를 이루고 있으며 종다양도, 최대종다양도, 균재도는 불암산, 봉화산, 대모산 지역으로 갈수록 높아지고 우점도는 불암산, 봉화산, 대모산 지역으로 갈수록 낮아진다.

• BMB Reports
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• 제56권8호
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• pp.463-468
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• 2023

Screening for genetic defects in the cells should be examined for clinical application. The Pearson syndrome (PS) patient harbored nuclear mutations in the POLG and SSBP1 genes, which could induce systemic large-scale mitochondrial genome (mtDNA) deletion. We investigated iPSCs with mtDNA deletions in PS patient and whether deletion levels could be maintained during differentiation. The iPSC clones derived from skin fibroblasts (9% deletion) and blood mononuclear cells (24% deletion) were measured for mtDNA deletion levels. Of the 13 skin-derived iPSC clones, only 3 were found to be free of mtDNA deletions, whereas all blood-derived iPSC clones were found to be free of deletions. The iPSC clones with (27%) and without mtDNA deletion (0%) were selected and performed in vitro and in vivo differentiation, such as embryonic body (EB) and teratoma formation. After differentiation, the level of deletion was retained or increased in EBs (24%) or teratoma (45%) from deletion iPSC clone, while, the absence of deletions showed in all EBs and teratomas from deletion-free iPSC clones. These results demonstrated that non-deletion in iPSCs was maintained during in vitro and in vivo differentiation, even in the presence of nuclear mutations, suggesting that deletion-free iPSC clones could be candidates for autologous cell therapy in patients.

• Tuberculosis and Respiratory Diseases
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• 제50권5호
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• pp.579-590
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• 2001

연구배경 : 노화란 반응성산소종에 의한 산화적 손상이 축적되어 세포의 기능의 저하로 초래된다고 주장되고 있다. 본 연구에서 1, 4, 8, 12개월된 정상 생쥐의 폐에서 반응성 산소종 생성의 초기에 중요한 방어기전인 superoxide dismutases(SODs) mRNA와 hydroxy radical($OH{\cdot}$)에 의한 산화적 손상의 마지막 방어기전인 metallothionein(MT) mRNA의 함량과 paraquat에 의한 유도능을 조사하였다. 방 법 : 산화적손상은 세포내에서 superoxide을 생성하는 paraquat를 투여한 후 SODs와 MT mRNAs을 RT-PCR 방법으로 측정하였다. 결 과 : 정상생쥐의 폐의 노화과정에서 Mn-SOD와 Cu/Zn-SOD, 그리고 MT mRNA의 항정상태 함량을 조사한 결과, Mn-SOD mRNA는 8개월까지는 증가하다가 12개월에서 감소하였으나, Cu/Zn-SOD mRNA는 별 변화가 없었고 12개월에 감소하였다. 그러나 MT mRNA는 어느 연령에도 변화가 없었다. 산화성 스트레스를 유발하는 paraquat에 의하여 Mn-SOD mRNA는 4개월 부터 유도되지 않았으며, Cu/Zn-SOD mRNA는 전혀 유도되지 않았다. MT mRNA는 관찰한 전 연령에서 유도되었다. 결 론 : 노화과정에서 SODs유도능의 이상이 노화의 원인 인자로 작용하고, 반면에 MT의 정상적인 유도능이 산화적 스트레스에 대하여 방어 역할을 할 가능성을 시사해주고 있다. 이와 같은 결과는 연령이 증가함에 따라 Mn-SOD, Cu/Zn-SOD, 및 MT의 발현과 유도능의 차이로 인하여 반응성 산소종에 의한 산화적 손상의 정도의 차이가 노화의 속도를 결정하는 하나의 인자로 작용할 가능성 이 있을 것으로 생각된다.

• Journal of Applied Biological Chemistry
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• 제57권3호
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• pp.259-265
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• 2014

Mitochondrial DNA (mtDNA)-depleted (${\rho}^0$) cells are often used as mtDNA recipients to study the interaction between the nucleus and mitochondria in mammalian cells. Therefore, it is crucial to obtain mtDNA-depleted cells with many different nuclear backgrounds for the study. Here, we demonstrate a rapid and reliable method to isolate mammalian mtDNA-depleted cells involving treatment with the antimitochondrial agents ethidium bromide (EtBr) and 2',3'-dideoxycytidine (ddC). After a short exposure to EtBr or ddC, followed by rapid clonal isolation, we were able to generate viable mtDNA-depleted cells from mouse and human cells and were able to successfully repopulate them with exogenous mitochondria from platelets isolated from mouse and human blood samples. These mtDNA-depleted cells can be used to characterize the nuclear mitochondrial interactions and to study mtDNA-associated defects in mammalian cells. Our method of isolating mtDNA-depleted cells is practical and applicable to a variety of cell types.

• Asian Pacific Journal of Cancer Prevention
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• 제16권11호
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• pp.4493-4496
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• 2015

Alterations in mitochondrial DNA (mtDNA) have been studied in various cancers. However, the clinical value of mtDNA copy number (mtCN) alterations in gastric cancer (GC) is poorly understood. In the present study, we investigated whether alterations in mtCNs might be associated with clinicopathological parameters in GC cases. mtCN was measured in 109 patients with GC by real-time PCR. Then, correlations with clinicopathological characteristics were analyzed. mtCN was elevated in 64.2% of GC tissues compared with paired, adjacent, non-cancerous tissue. However, the observed alterations in mtCN were not associated with any clinicopathological characteristics, including age, gender, TN stage, Lauren classification, lymph node metastasis, and depth of invasion. Moreover, Kaplan-Meier survival curves revealed that mtCN was not significantly associated with the survival of GC patients. In this study, we demonstrated that mtCN was not a significant marker for predicting clinical characteristics or prognosis in GC.

• Asian Pacific Journal of Cancer Prevention
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• 제16권1호
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• pp.87-90
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• 2015

Alterations in mitochondrial DNA (mtDNA) have been studied in various cancers. However, the clinical value of mtDNA copy number (mtCN) alterations in gastric cancer (GC) is poorly understood. In the present study, we investigated whether alterations in mtCNs might be associated with clinicopathological parameters in GC cases. mtCN was measured in 109 patients with GC by quantitative real-time PCR. Then, correlations with clinicopathological characteristics were analyzed. mtCN was elevated in 64.2% of GC tissues compared with paired, adjacent, non-cancerous tissue. However, the observed alterations in mtCN were not associated with any clinicopathological characteristics, including age, gender, TN stage, Lauren classification, lymph node metastasis, and depth of invasion. Moreover, Kaplan-Meier survival curves revealed that mtCN was not significantly associated with the survival of GC patients. In this study, we demonstrated that mtCN was not a significant marker for predicting clinical characteristics or prognosis in GC.

• Archives of Pharmacal Research
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• 제20권6호
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• pp.560-565
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• 1997

The physicochemical properties of melatonin (MT) in propylene glycol (PG) and 2-hydroxypropyl-.betha.-cyclodextrin $(2-HP{\beta}CD)$ vehicles were characterized. MT was endothermally decomposed as determined by differential scanning calorimetry (DSC). Melting point and heat of fusion obtained were $116.9{\pm}0.24^{\circ}C $.and $7249{\pm}217 cal/mol$., respectively. MT as received from a manufacture was very pure, at least 99.9%. The solubility of MT in PG solution increased slowly until reaching 40% PG and then steeply increased. Solubility of MT increased linearly as concentration of $2-HP{\beta}CD$ without PG INCREASED$(R^2=0.993)$. MT solubility in the mixtures of pg and $2-HP{\beta}CD$ also increased linearly but was less than the sum of its solubility in $2-HP{\beta}CD$ and PG individually. The MT solubility was low in water, simulated gastric or intestinal fluid but the highest in the mixture of PG(40v/v%) and $2-HP{\beta}CD$ (30w/v%) although efficiency of MT solubilization in $2-HP{\beta}CD$ decreased as the concentration of PG increased. MT was degraded in a fashion of the first order kinetics $(r^2>0.90)$. MT was unstable in strong acidic solution (HCl-NaCl buffer, pH 1.4) but relatively stable in other pH values of 4-10 at $70^{\circ}C$. In HCl-NaCl buffer, MT in 10% PG was more quickly degraded and then slowed dpwm at a higher concentration. However, the degradation rate constant of MT in 2-HP.betha.CD was not changed significantly when compared to the water. The current studies can be applied to the dosage formulations for the purpose of enhancing percutaneous absorption or bioavailability of MT.

• 한국환경복원기술학회지
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• 제18권6호
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• pp.201-214
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• 2015

This study was conducted to identify forest topsoil's usefulness from July 2013 to Oct 2014. Generally, there are abundant seeds in topsoils and it can be used at restoration works. Mt. GARIWANG is famous for biodiversity in Korea. This study was aimed to find out the suitable utilization methods of natural topsoils for restoration works at sky-slopes construction sites. Test beds was made to identify suitable collecting times and suitable topsoil thickness. The main results are summarized as follows. First, Mt. GARIWANG have diverse species and in topsoils we can find lots of burried seeds which can be used at restoration works. Second, according to indoor experiment, as the depth of topsoil used thicker, the number of plants and coverage rates were increased. Also, there were no distinct differences in coverage rates between 5cm and 8cm thick topsoil plots and it can be possible to use at least 3cm thick topsoils even thou lower coverage rates. Third, as the results of research about indoor and outdoor experimental plots, there were difference in plant emergency. If we use the stabilizer to protect soil erosion, then we can get more increased results at sloped outdoor experimental plots. Fourth, based on environmental impact assessment, there was 389 species in whole region of Mt. GARIWANG. Through this seed bank experiments, we can find 23 varieties, including 4 tree varieties and 19 herbaceous varieties. We can find lots of native herbaceous species from topsoils. Fifth, this research was done at the specific area of Mt. GARIWANG and used limited topsoils. But we monitoring more longer periods, then there will be more useful outcomes. Finally by researching topsoils of Mt. GARIWANG, we can find diverse native plants. Thus, we must reuse natural topsoils of Mt. Gariwang for restoration of original vegetation.

• Tuberculosis and Respiratory Diseases
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• 제80권3호
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• pp.255-264
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• 2017

Background:N-acetyl transferase (NAT) inactivates the pro-drug isoniazid (INH) to N-acetyl INH through a process of acetylation, and confers low-level resistance to INH in Mycobacterium tuberculosis (MTB). Similar to NAT of MTB, NAT2 in humans performs the same function of acetylation. Rapid acetylators, may not respond to INH treatment efficiently, and could be a potential risk factor, for the development of INH resistance in humans. Methods: To understand the contribution of NAT of MTB and NAT2 of humans in developing INH resistance using in silico approaches, in this study, the wild type (WT) and mutant (MT)-NATs of MTB, and humans, were modeled and docked, with substrates and product (acetyl CoA, INH, and acetyl INH). The MT models were built, using templates 4BGF of MTB, and 2PFR of humans. Results: On the basis of docking results of MTB-NAT, it can be suggested that in comparison to the WT, binding affinity of MT-G207R, was found to be lower with acetyl CoA, and higher with acetyl-INH and INH. In case of MT-NAT2 from humans, the pattern of score with respect to acetyl CoA and acetyl-INH, was similar to MT-NAT of MTB, but revealed a decrease in INH score. Conclusion: In MTB, MT-NAT revealed high affinity towards acetyl-INH, which can be interpreted as increased formation of acetyl-INH, and therefore, may lead to INH resistance through inactivation of INH. Similarly, in MT-NAT2 (rapid acetylators), acetylation occurs rapidly, serving as a possible risk factor for developing INH resistance in humans.

• 수산해양기술연구
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• 제53권3호
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• pp.266-275
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• 2017

The maximum sustained yield (MSY) of shellfish caught through dredge fishery was 7,250 to 7,490 MT from 1990 to 1999, which was not affected by the construction of the Saemangeum Dike. The MSY from 2000 to 2016, under the influence of the dike, was 1,716 to 1,776 MT when the total annual fish catch was 1,000 MT or more, and 289 to 336 MT when it was less than 1,000 MT. The construction of the Saemangeum Dike led to a decrease in the catch volume of the offshore dredge fishery in Jeollabuk-do, to 4.2 to 23.7% of that before its construction. The allowable biological catch (ABC) was estimated to be 313 to 1,532 MT per year, which was about 72.3 to 94.3% less than before the construction of Saemangeum Dike. Currently, the dredge fishery in Jeollabuk-do relies on comb pen shells. For fishery management, the catch per vessel should be set at 51.0 MT/year or less, and the number of fishing vessels should be reduced to 22 as quickly as possible. Besides, in the long term, the number of current fishing vessels should be reduced to less than half in consideration of the comb pen shell collecting period in Jeollabuk-do.