• Title/Summary/Keyword: Morphological characterization

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Morphological and Multigene Sequence Characteristics of Talaromyces variabilis Isolated from Soil in Korea

  • Adhikari, Mahesh;Kim, Sang Woo;Lee, Hyang Burm;Lee, Youn Su
    • The Korean Journal of Mycology
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    • v.49 no.1
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    • pp.11-19
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    • 2021
  • In 2017, Talaromyces variabilis was isolated during a survey of fungal diversity in field soils in Korea. This isolate was described based on its morphological and molecular characteristics and it was identified molecularly using the partial 18S-ITS1-5.8S-ITS2-28S rDNA region and calmodulin (CaM)-encoding gene sequence data. Thus, this study reported morphological and multigene sequence characterization of T. variabilis.

Molecular Characterization of Filenchus cylindricus (Thorne & Malek, 1968) Niblack & Bernard, 1985 (Tylenchida: Tylenchidae) from Korea, with Comments on Its Morphology

  • Mwamula, Abraham Okki;Kim, Yiseul;Kim, Yeong Ho;Lee, Ho-wook;Kim, Young Ho;Lee, Dong Woon
    • The Plant Pathology Journal
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    • v.38 no.4
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    • pp.323-333
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    • 2022
  • Filenchus cylindricus (Thorne & Malek, 1968) Niblack & Bernard, 1985 was reported from the sandy rhizospheric soils of Poa pratensis and for the first time in Korea. Females and males are molecularly characterized and morphological and morphometric data supplied. Identification was made using an integrative approach considering morphological characteristics and inferences drawn from the analyses of the D2-D3 expansion segment of 28S rRNA and ITS1-5.8S-ITS2 of rRNA partial sequences. Females and males from Korea conform to the type descriptions and also to subsequent species descriptions from Iowa and Colorado USA, Sudan and Pakistan. Despite the close morphological and morphometric similarities with F. thornei (Andrássy, 1954) Andrássy, 1963, the two species can be adequately differentiated based on molecular data inference.

Revisiting Rhytisma lonicericola: Morphological Characterization and Molecular Phylogenetic Analysis

  • Jung, Bok-Nam;Park, Ji-Hyun;Shin, Hyeon-Dong
    • Mycobiology
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    • v.50 no.2
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    • pp.150-154
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    • 2022
  • Rhytisma lonicericola was identified as a tar spot fungus on Lonicera sp. in 1902, and has since been recorded on several species of Lonicera in China, Japan, and Korea. Most of the previous records of R. lonicericola have been based on a list of disease occurrences in the absence of any formal morphological identification or molecular analyses. Using six newly obtained specimens collected in the past 2 years, we confirmed the tar spot fungus found on L. japonica in Korea as R. lonicericola based on morphological examinations and molecular phylogenetic analyses. This fungus was distinguished from R. xylostei, another tar spot fungus on Lonicera, by ascospore size and geographical distributions. We present detailed mycological information and, for the first time, DNA sequence data useful for the identification of R. lonicericola.

Morphological and Molecular Characterization of Pseudocercospora chionanthi-retusi Causing Leaf Spot on Chionanthus retusus in Korea

  • Choi, In-Young;Abasova, Lamiya;Choi, Joon-Ho;Shin, Hyeon-Dong
    • Research in Plant Disease
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    • v.28 no.2
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    • pp.57-60
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    • 2022
  • Leaves of Chionanthus retusus were found to be damaged by leaf spot disease associated with a fungus in Iksan, Korea. Leaf spots were angular to irregular, vein-limited, scattered, 1-8 mm diameter, brownish-gray to dark brown when dry, with heavy fructification. The pathogen causes premature defoliation of C. retusus plant and was identified as Pseudocercospora chionanthi-retusi based on morphological and molecular-phylogenetic analyses. The phylogenetic tree was constructed using multi-locus DNA sequence data of partial actin (actA), partial translation elongation factor 1-alfa (tef1), partial DNA-directed RNA polymerase II second largest subunit (rpb2) genes, and internal transcribed spacer regions. Current study provides detail morphological description of P. chionanthi-retusi on C. retusus in Korea, with supports of phylogenetic analysis and pathogenicity test.

Characterization of Biometry and Chemical and Morphological Properties of Fibers from Bagasse, Corn, Sunflower, Rice, and Rapeseed Residues in Iran

  • Kiaei, Majid;Samariha, Ahmad;Kasmani, Jafar Ebrahimpour
    • Journal of Forest and Environmental Science
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    • v.26 no.2
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    • pp.75-82
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    • 2010
  • The biometry, morphological properties and chemical composition of bagasse, corn, sunflower, rice, and rapeseed residues plants were analyzed. The results revealed differences in biometry properties and chemical composition of the different types of agricultural resides investigated. The greatest proportion of fiber length (1.32 mm) and cellulose (55.56%) was found in residues of bagasse plants, with a low ash (1.78%) and lignin (20.5%). The lignin of all types of agricultural resides was less than hardwood and softwood. In addition, the rice and rapeseed residues plants had highest amount of ash and extractive component. The slenderness and flexibility ratios of the all types of agricultural resides fibers were similar to some of hardwood and softwood species.

First Molecular Characterization of Hypoderma actaeon in Cattle and Red Deer (Cervus elaphus) in Portugal

  • Ahmed, Haroon;Sousa, Sergio Ramalho;Simsek, Sami;Anastacio, Sofia;Kilinc, Seyma Gunyakti
    • Parasites, Hosts and Diseases
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    • v.55 no.6
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    • pp.653-658
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    • 2017
  • Hypoderma spp. larvae cause subcutaneous myiasis in several animal species. The objective of the present investigation was to identify and characterize morphologically and molecularly the larvae of Hypoderma spp. collected from cattle (Bos taurus taurus) and red deer (Cervus elaphus) in the district of Castelo Branco, Portugal. For this purpose, a total of 8 larvae were collected from cattle (n=2) and red deer (n=6). After morphological identification of Hypoderma spp. larvae, molecular characterization was based on PCR-RFLP and mitochondrial CO1 gene sequence analysis. All larvae were morphologically characterized as the third instar larvae (L3) of H. actaeon. Two restriction enzymes were used for molecular identification of the larvae. TaqI restriction enzyme was not able to cut H. actaeon. However, MboII restriction enzyme differentiated Hypoderma species showing 210 and 450 bp bands in H. actaeon. Furthermore, according to the alignment of the mt-CO1 gene sequences of Hypoderma species and to PCR-RFLP findings, all the identified Hypoderma larvae were confirmed as H. actaeon. This is the first report of identification of Hypoderma spp. (Diptera; Oestridae) from cattle and red deer in Portugal, based on morphological and molecular analyses.