• 제목/요약/키워드: Molecular ecology

검색결과 343건 처리시간 0.023초

키토산 처리에 의한 부직포의 태 변화 (Effect of Chitosan Treatment on the Hand of Nonwoven Fabric)

  • 신윤숙;손경희
    • 한국가정과학회지
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    • 제1권2호
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    • pp.119-128
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    • 1998
  • Nonwoven fabrics for diaper coverstock were treated with chitosan solution by pad-dry method. Two chitosans of different molecular weigh(Mw) with similar degree of deacetylation(DDA) were used: Mw 1,800(chitosan oligomer, DDA 84%). Effect of chitosan treatment on the mechanical properties was investigated using KES-FB system. Primary hand values were calculated from mechanical properties using the same equation as the men's suiting equation with minor modification, and total hand values were calculated using new KN-5LNW equation for nonwoven fabrics developed by Kawabata et al. Increase in chitosan treatment concentration increased B, 2HB, WT, LT and RC, and decreased WC continuously. Chitosan treatment affected other mechanical properties regardless of molecular weight. Considering primary hand values obtained from mechanical properties, it was found that chitosan of Mw 180,000 and chitosan oligomer provided softer, smoother, and more bulky at below 0.05% and above 0.5% treatment concentration respectively. Samples treated with 1.0% chitosan oligomer solution, and 0.01% chitosan solution of Mw 180,000 showed the best total hand values. (Korean J Human Ecology 1(2):119∼128, 1998)

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Deciphering the molecular mechanisms underlying the plasma membrane targeting of PRMT8

  • Park, Sang-Won;Jun, Yong-Woo;Choi, Ha-Eun;Lee, Jin-A;Jang, Deok-Jin
    • BMB Reports
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    • 제52권10호
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    • pp.601-606
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    • 2019
  • Arginine methylation plays crucial roles in many cellular functions including signal transduction, RNA transcription, and regulation of gene expression. Protein arginine methyltransferase 8 (PRMT8), a unique brain-specific protein, is localized to the plasma membrane. However, the detailed molecular mechanisms underlying PRMT8 plasma membrane targeting remain unclear. Here, we demonstrate that the N-terminal 20 amino acids of PRMT8 are sufficient for plasma membrane localization and that oligomerization enhances membrane localization. The basic amino acids, combined with myristoylation within the N-terminal 20 amino acids of PRMT8, are critical for plasma membrane targeting. We also found that substituting Gly-2 with Ala [PRMT8(G2A)] or Cys-9 with Ser [PRMT8(C9S)] induces the formation of punctate structures in the cytosol or patch-like plasma membrane localization, respectively. Impairment of PRMT8 oligomerization/dimerization by C-terminal deletion induces PRMT8 mis-localization to the mitochondria, prevents the formation of punctate structures by PRMT8(G2A), and inhibits PRMT8(C9S) patch-like plasma membrane localization. Overall, these results suggest that oligomerization/dimerization plays several roles in inducing the efficient and specific plasma membrane localization of PRMT8.

Molecular Analysis of Archaea, Bacteria and Eucarya Communities in the Rumen - Review-

  • White, B.A.;Cann, I.K.O.;Kocherginskaya, S.A.;Aminov, R.I.;Thill, L.A.;Mackie, R.I.;Onodera, R.
    • Asian-Australasian Journal of Animal Sciences
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    • 제12권1호
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    • pp.129-138
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    • 1999
  • If rumen bacteria can be manipulated to utilize nutrients (i.e., ammonia and plant cell wall carbohydrates) more completely and efficiently, the need for protein supplementation can be reduced or eliminated and the digestion of fiber in forage or agricultural residue-based diets could be enhanced. However, these approaches require a complete and accurate description of the rumen community, as well as methods for the rapid and accurate detection of microbial density, diversity, phylogeny, and gene expression. Molecular ecology techniques based on small subunit (SSU) rRNA sequences, nucleic acid probes and the polymerase chain reaction (PCR) can potentially provide a complete description of the microbial ecology of the rumen of ruminant animals. The development of these molecular tools will result in greater insights into community structure and activity of gut microbial ecosystems in relation to functional interactions between different bacteria, spatial and temporal relationships between different microorganisms and between microorganisms and reed panicles. Molecular approaches based on SSU rRNA serve to evaluate the presence of specific sequences in the community and provide a link between knowledge obtained from pure cultures and the microbial populations they represent in the rumen. The successful development and application of these methods promises to provide opportunities to link distribution and identity of gastrointestinal microbes in their natural environment with their genetic potential and in situ activities. The use of approaches for assessing pupulation dynamics as well as for assessing community functionality will result in an increased understanding and a complete description of the gastrointestinal communities of production animals fed under different dietary regimes, and lead to new strategies for improving animal growth.

Recent Advances in Gut Microbiology and Their Possible Contribution to Animal Health and Production - A Review -

  • Kobayashi, Yasuo;Koike, Satoshi;Taguchi, Hidenori;Itabashi, Hisao;Kam, Dong K.;Ha, Jong K.
    • Asian-Australasian Journal of Animal Sciences
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    • 제17권6호
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    • pp.877-884
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    • 2004
  • Although gut microbial functions have been analyzed through cultivation of isolated microbes, molecular analysis without cultivation is becoming a popular approach in recent years. Gene cloning studies have partially revealed the mechanisms involved in fiber digestion of individual microbe. The molecular approach finally made it possible to analyze full genomes of the representative rumen cellulolytic bacteria Fibrobacter and Ruminococcus. The coming database may contain useful information such as regulation of gene expression relating to fiber digestion. Meanwhile, unculturable bacteria are still poorly characterized, even though they are main constituents of gut microbial ecosystem. The molecular analysis is essential to initiating the studies on these unculturable bacteria. The studies dealing with rumen and large intestine are revealing considerable complexity of the microbial ecosystems with many undescribed bacteria. These bacteria are being highlighted as possibly functional members contributing to feed digestion. Manipulation of gut bacteria and gut ecology for improving animal production is still at challenging stage. Bacteria newly introduced in the rumen, whether they are genetically modified or not, suffer from poor survival. In one of these attempts, Butyrivibrio fibrisolvens expressing a foreign dehalogenase was successfully established in sheep rumen to prevent fluoroacetate poisoning. This expands choice of forages in tropics, since many tropic plants are known to contain the toxic fluoroacetate. This example may promise the possible application of molecular breeding of gut bacteria to the host animals with significance in their health and nutrition. When inoculation strategies for such foreign bacteria are considered, it is obvious that we should have more detailed information of the gut microbial ecology.

tufA gene as molecular marker for freshwater Chlorophyceae

  • Vieira, Helena Henriques;Bagatini, Inessa Lacativa;Guinart, Carla Marques;Vieira, Armando Augusto Henriques
    • ALGAE
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    • 제31권2호
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    • pp.155-165
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    • 2016
  • Green microalgae from the class Chlorophyceae represent a major biodiversity component of eukaryotic algae in continental water. Identification and classification of this group through morphology is a hard task, since it may present cryptic species and phenotypic plasticity. Despite the increasing use of molecular methods for identification of microorganisms, no single standard barcode marker is yet established for this important group of green microalgae. Some available studies present results with a limited number of chlorophycean genera or using markers that require many different primers for different groups within the class. Thus, we aimed to find a single marker easily amplified and with wide coverage within Chlorophyceae using only one pair of primers. Here, we tested the universality of primers for different genes (tufA, ITS, rbcL, and UCP4) in 22 strains, comprising 18 different species from different orders of Chlorophyceae. The ITS primers sequenced only 3 strains and the UCP primer failed to amplify any strain. We tested two pairs of primers for rbcL and the best pair provided sequences for 10 strains whereas the second one provided sequences for only 7 strains. The pair of primers for the tufA gene presented good results for Chlorophyceae, successfully sequencing 21 strains and recovering the expected phylogeny relationships within the class. Thus, the tufA marker stands out as a good choice to be used as molecular marker for the class.

국내산 자포니카와 인디카 품종 찹쌀전분의 호화특성과 분자구조 (Gelatinization Properties and Molecular Structure of Waxy Rice Starches Isolated from Korean Japonica and Indica Cultivars)

  • 오송민;노준희;신말식
    • 한국식품조리과학회지
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    • 제30권6호
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    • pp.716-725
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    • 2014
  • Gelatinization properties and the molecular structure of Korean waxy rice starchesisolated from two japonica types, Sinseonchal, and Dongjinchal, as well as an indica type, Hangangchal 1 were investigated. Sinseonchal is preferred cultivar for making Korean traditional rice cakes and cookies. Sinseonchal starch was the highest in crude protein, amylopectin, damaged starch contents, and water binding capacity among the cultivars tested. The initial pasting temperature ($72.75^{\circ}C$), peak (360.54 RVU), breakdown (162.21 RVU) and setback (30.83 RVU) viscosities of Sinseonchal had the highest values (p<0.05). Onset and peak temperatures by differential scanning calorimeter were also the highest in Sinseonchal. The molecular weight of Sinseonchal amylopectin was 5.46 107higher than those of the other cultivars, but its peak height and area were the lowest among them. The amylopectin peak by HPSEC showed a shoulder in the lower molecular weight portion and its relative area decreased in the following order; Sinseonchal > Dongjinchal > Hangangchal 1. On the branch chain length distribution of amylopectin, the proportion of DP13-24 and DP25-36 showed reverse trends, with higher japonica type amylopectin in DP13-24.

Methodology for Describing Different Phase States of Molecular Nitrogen

  • Cho, Haeng Muk;Kudryavtsev, I.N.;Kramskoy, A.V.
    • 에너지공학
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    • 제23권4호
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    • pp.215-222
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    • 2014
  • A theory-based methodology for describing the thermodynamic properties of molecular nitrogen is presented. The results obtained indicate a successful application of a fully consistent statistical method for the description of a molecular system in different phase states. The method employs a density of states equation for solid nitrogen and a perturbation potential for gaseous and liquid nitrogen. The main characteristics of the calculation method include the need for a minimal number of initial data and the absence of fitting parameters. The adequacy of the physical model that is the basis for the method allows a description of existing experimental data and the peculiarities of the thermodynamic properties.

Unrecorded Soil Fungi Isolated from the Dokdo, Korea

  • Eo, Ju-Kyeong;Park, Eunsu;Choi, Jae-Wook;Shin, Hyun-Chul;Choi, Seung-Se;Park, So-Yeon
    • Proceedings of the National Institute of Ecology of the Republic of Korea
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    • 제3권3호
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    • pp.172-177
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    • 2022
  • Two unrecorded fungi, Diaporthe perseae and Fusarium falciforme, were isolated from soil sampled from Dokdo in Korea. There have been many reports of Diaporthe sp. and Fusarium sp. in mainland Korea but none of them have reported in Dokdo so far. We used the morphological features and two molecular markers including the internal transcribed spacer and translation elongation factor 1-α region to compare and analyze these species with the closely related taxa. As a result, we confirmed that these fungi were unrecorded soil fungi in Korea. Then, the cultural and morphological characteristics such as the conidia of these two fungal species could be clarified. These results are expected to help us to understand the distribution of fungi in Dokdo and manage the Dokdo Island Natural Reserve.

부산시 귀화식물의 현황과 고찰 (Study of the Status of Naturalized Plants in Busan City, South Korea)

  • 이창우;조혜정;강민정;허만규;황인천;최병기
    • 생명과학회지
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    • 제25권11호
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    • pp.1244-1254
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    • 2015
  • 부산시에 분포하고 있는 귀화식물은 총 31과 95속 147종 9변종으로 총 156분류군으로 확인되었다. 조사된 귀화식물의 과별분포는 국화과가 가장 다양한 44분류군으로 나타났으며, 벼과 24분류군, 콩과 10분류군의 순이었다. 생활형 분석결과 1~2년생 식물이 107분류군으로 전체의 68.6%를 차지했으며, 다년생 식물 47분류군(30.1%), 관목 1분류군(0.6%), 교목 1분류군(0.6%)이 확인되었다. 귀화도 분석결과 귀화도 2가 가장 많은 종수(42분류군)를 나타내었으나, 한반도 전체 귀화식물종의 분포를 고려할 때 귀화도 5의 종이 전체의 96.3%인 26분류군이 출현해 높은 종 다양성을 확인 할 수 있었다. 원산지 분석결과 유럽(50종)과 북아메리카(48종) 원산의 종이 높은 분포율을 보였으며, 정착양식은 이차식생 귀화종이 123분류군으로 가장 높은 수치를 나타냈다. 유입시기와 유입방법은 유입 1기와 탈출외래종에서 가장 높은 수치를 나타냈다. 부산지역에 분포하는 귀화식물의 분포 특성을 분석한 결과, 삼림을 제외한 대부분의 서식처 유형에서 다양한 귀화식물들이 확인되었으며, 한국 귀화식물종의 중요한 유입경로로 활용되고 있는 것으로 판단된다. 따라서 이들 종을 모니터링하기 위한 지속가능한 관리방안의 마련이 필요하며, 유입된 귀화식물의 생태적 특성을 파악하고 체계적인 관리방안 확립이 요구된다.

Morphological and Molecular Phylogenetic Data of the Chinese Medicinal Fungus Cordyceps liangshanensis Reveal Its New Systematic Position in the Family Ophiocordycipitaceae

  • Wang, Yao;Dai, Yong-Dong;Yang, Zhong-Lin;Guo, Rui;Wang, Yuan-Bing;Yang, Zhu L.;Ding, Lei;Yu, Hong
    • Mycobiology
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    • 제49권4호
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    • pp.297-307
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    • 2021
  • A cordycipitoid fungus infecting Hepialidae sp. in Nepal was supposed to be identical to Cordyceps liangshanensis, originally described from southwestern China, and thus, transferred to the genus Metacordyceps or Papiliomyces in previous studies. However, our multi-gene (nrSSU-nrLSU-tef-1α-rpb1-rpb2) phylogenetic and morphological studies based on the type specimen and additional collections of C. liangshanensis revealed that the fungus belongs to the genus Ophiocordyceps (Ophiocordycipitaceae). Therefore, a new combination O. liangshanensis was made, and a detailed description of this species was provided.