• Title/Summary/Keyword: Molecular Spectroscopy

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Effect of γ-Irradiation on the Molecular Properties of Bovine Serum Albumin and β-Lcatoglobulin

  • Cho, Yong-Sik;Song, Kyung-Bin
    • BMB Reports
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    • v.33 no.2
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    • pp.133-137
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    • 2000
  • To elucidate the effect of oxygen radicals on the molecular properties of proteins, the secondary and tertiary structure and molecular weight size of BSA and ${\beta}$-lactoglobulin were examined after irradiation of proteins at various doses. Gamma-irradiation of protein solutions caused the disruption of the ordered structure of protein molecules as well as degradation, cross-linking, and aggregation of the polypeptide chains. As a model system, BSA and ${\beta}$-lactoglobulin were used as a typical ${\alpha}$-helical and a ${\beta}$-sheet structure protein, respectively. A circular dichroism study showed that the increase of radiation decreased the ordered structure of proteins with a concurrent increase of aperiodic structure content. Fluorescence spectroscopy indicated that irradiation quenched the emission intensity excited at 280 nm. SDS-PAGE and a gel permeation chromatography study indicated that radiation caused initial fragmentation of proteins resulting in a subsequent aggregation due to cross-linking of protein molecules.

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Examination of the Nickel Site Structure in Streptomyces seoulensis Superoxide Dismutase by EPR and X-ray Absorption Spectroscopy

  • Lee, Jin-Won;Yim, Yang-In;Michael J. Maroney;Kang, Sa-Ouk
    • Proceedings of the Korean Biophysical Society Conference
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    • 1998.06a
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    • pp.26-26
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    • 1998
  • Superoxide dismutases are metalloenzymes catalyzing the dimutation of superoxide anion radical to hydrogen peroxide and molecular oxygen. Examples of enzymes containing Cu, Mn and Fe as the redox-active metal have been characterized. Recently, an SOD containing one Ni atom per subunit was reported.(omitted)

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Time-Resolved Infrared Spectroscopy of Molecular Reorientation During FLC Electro-Optic Switching

  • Jang, Won-Gun;Clark, Noel A.
    • 한국정보디스플레이학회:학술대회논문집
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    • 2003.07a
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    • pp.1112-1117
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    • 2003
  • Polarized Fourier transform infrared (IR) absorption is used to probe molecular conformation in a ferroelectric liquid crystal (FLC) during the reorientation induced by the external field. Spectra of planar aligned cells of FLC W314 are measured as functions of IR polarizer orientation and electric field applied to the FLC. The time evolution of the dichroism of the absorbance due to biphenyl core and alkyl tail molecular vibration modes, is observed. Static IR dichroism experiments show a W314 dichroism structure in which the principal axis of dielectric tensor from molecular core vibration are tilted further from the smectic layer normal than those of the tail. This structure indicates the effective binding site in which the molecules are confined in the Sm-C phase has, on average, "zig-zag" shape and this zig-zag binding site structure is rigidly maintained while the molecular axis rotates about the layer normal during field-induced switching.

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Effect of γ-Irradiation on the Molecular Properties of Myoglobin

  • Lee, Yong-Woo;Song, Kyung-Bin
    • BMB Reports
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    • v.35 no.6
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    • pp.590-594
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    • 2002
  • To elucidate the effect of gamma-irradiation on the molecular properties of myoglobin, the secondary and tertiary structures, as well as the molecular weight size of the protein, were examined after irradiation at various irradiation doses. Gamma-irradiation of myoglobin solutions caused the disruption of the ordered structure of the protein molecules, as well as degradation, cross-linking, and aggregation of the polypeptide chains. A SDS-PAGE study indicated that irradiation caused initial fragmentation of the proteins and subsequent aggregation, due to cross-linking of the protein molecules. The effect of irradiation on the protein was more significant at lower protein concentrations. Ascorbic acid protected against the degradation and aggregation of proteins by scavenging oxygen radicals that are produced by irradiation. A circular dichroism study showed that an increase of the irradiation decreased the a-helical content of myoglobin with a concurrent increase of the aperiodic structure content. Fluorescence spectroscopy indicated that irradiation increased the emission intensity that was excited at 280 nm.

A Study on Rubbing-induced Molecular Alignment on an Orientation Layer of Polyimide for Liquid Crystal Display (LCD의 폴리이미드 배향막에서 Rubbing에 의한 분자배향에 관한 연구)

  • 최승우;정재원;김승빈;황상만;천희곤;조동율
    • Journal of the Korean Institute of Electrical and Electronic Material Engineers
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    • v.11 no.4
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    • pp.306-313
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    • 1998
  • To elucidate the liquid crystal(LC) molecules alignment mechanism, it is important to determine the molecular orientation of the rubbed polymer surface molecules that directly contact with LC molecules. In this work, the molecular orientation on a rubbed surface of polyimide (SE-3310, Nissan) film has been studied by polarized FTIR absorption spectroscopy. It has been found that molecular chain on the rubbed surface of polymide film are oriented along the rubbing direction and are tilted up on an average by 5.0$^{\circ}$. In the SHG(Second Harmonic Generation) measurement, the pretilt angle of molecular chain on the poylmide fim was 4.6$^{\circ}$ fro, the surface plane. And the pedit angle of liquid crystal (ZLI-2293, Merck) molecules measured by crystal rotation method was 5.4$^{\circ}$in the same rubbing condition.

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Determination of the Number of Components in Spectroscopy from the Multilinear Model Fitting

  • Kim, Choong-Rak;Chung, Byung-Chull;Lee, Choon-Hwan
    • Communications for Statistical Applications and Methods
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    • v.6 no.2
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    • pp.367-374
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    • 1999
  • Biological specimens contain several components and multilinear models are very useful in analyzing these data. After fitting the model the number of components are determined by the change of mean squared error however this method is quite rule of thumb. in this paper we suggest a measure to decide the number of components based on the relative change of to mean squared error. Simulations are done and applications to real data set are given as illustrations.

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Characterization of the Active Site of Ascorbyl Free Radical Reductase Purified from Pleurotus ostreatus

  • Yu, Seong-Woon;Kang, Sa-Ouk
    • Proceedings of the Korean Biophysical Society Conference
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    • 1998.06a
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    • pp.25-25
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    • 1998
  • Ascorbyl free radical reductase was purified from the white rot fungus, Pleurotus ostreatus. The enzyme contained FMN as a prosthetic group, which was reduced by NADH and reoxidized by ascorbyl free radical. Reduction of ascorbyl free radical by the enzyme was observed by EPR spectroscopy.(omitted)

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Anion Receptors with 2-Imidazolidone Molecular Scaffold

  • Kim, Hyung-Il;Kang, Jong-Min
    • Bulletin of the Korean Chemical Society
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    • v.28 no.9
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    • pp.1531-1534
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    • 2007
  • Anion receptor based on 2-imidazolidone molecular scaffold has been synthesized. Anion binding studies carried out using 1H NMR and UV?vis spectroscopy revealed that this receptor 6 displays selectivity for the for the oxyanions such as acetate and dihydrogenphosphate ions and the affinity for the anions simply reflects the basicity of anions.