• 제목/요약/키워드: Mixed Effects Models

검색결과 172건 처리시간 0.036초

Semiparametric kernel logistic regression with longitudinal data

  • Shim, Joo-Yong;Seok, Kyung-Ha
    • Journal of the Korean Data and Information Science Society
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    • 제23권2호
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    • pp.385-392
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    • 2012
  • Logistic regression is a well known binary classification method in the field of statistical learning. Mixed-effect regression models are widely used for the analysis of correlated data such as those found in longitudinal studies. We consider kernel extensions with semiparametric fixed effects and parametric random effects for the logistic regression. The estimation is performed through the penalized likelihood method based on kernel trick, and our focus is on the efficient computation and the effective hyperparameter selection. For the selection of optimal hyperparameters, cross-validation techniques are employed. Numerical results are then presented to indicate the performance of the proposed procedure.

Nonlinear mixed models for characterization of growth trajectory of New Zealand rabbits raised in tropical climate

  • de Sousa, Vanusa Castro;Biagiotti, Daniel;Sarmento, Jose Lindenberg Rocha;Sena, Luciano Silva;Barroso, Priscila Alves;Barjud, Sued Felipe Lacerda;de Sousa Almeida, Marisa Karen;da Silva Santos, Natanael Pereira
    • Animal Bioscience
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    • 제35권5호
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    • pp.648-658
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    • 2022
  • Objective: The identification of nonlinear mixed models that describe the growth trajectory of New Zealand rabbits was performed based on weight records and carcass measures obtained using ultrasonography. Methods: Phenotypic records of body weight (BW) and loin eye area (LEA) were collected from 66 animals raised in a didactic-productive module of cuniculture located in the southern Piaui state, Brazil. The following nonlinear models were tested considering fixed parameters: Brody, Gompertz, Logistic, Richards, Meloun 1, modified Michaelis-Menten, Santana, and von Bertalanffy. The coefficient of determination (R2), mean squared error, percentage of convergence of each model (%C), mean absolute deviation of residuals, Akaike information criterion (AIC), and Bayesian information criterion (BIC) were used to determine the best model. The model that best described the growth trajectory for each trait was also used under the context of mixed models, considering two parameters that admit biological interpretation (A and k) with random effects. Results: The von Bertalanffy model was the best fitting model for BW according to the highest value of R2 (0.98) and lowest values of AIC (6,675.30) and BIC (6,691.90). For LEA, the Logistic model was the most appropriate due to the results of R2 (0.52), AIC (783.90), and BIC (798.40) obtained using this model. The absolute growth rates estimated using the von Bertalanffy and Logistic models for BW and LEA were 21.51g/d and 3.16 cm2, respectively. The relative growth rates at the inflection point were 0.028 for BW (von Bertalanffy) and 0.014 for LEA (Logistic). Conclusion: The von Bertalanffy and Logistic models with random effect at the asymptotic weight are recommended for analysis of ponderal and carcass growth trajectories in New Zealand rabbits. The inclusion of random effects in the asymptotic weight and maturity rate improves the quality of fit in comparison to fixed models.

Mapping Quantitative Trait Loci with Various Types of Progeny from Complex Pedigrees

  • Lee, C.;Wu, X.L.
    • Asian-Australasian Journal of Animal Sciences
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    • 제14권11호
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    • pp.1505-1510
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    • 2001
  • A method for mapping quantitative trait loci (QTL) was introduced incorporating the information of mixed progeny from complex pedigrees. The method consisted of two steps based on single marker analysis. The first step was to examine the marker-trait association with a mixed model considering common environmental effect and reversed QTL-marker linkage phase. The second step was to estimate QTL effects by a weighted least square analysis. A simulation study indicated that the method incorporating mixed progeny from multiple generations improved the accuracy of QTL detection. The influence of within-genotype variance and recombination rate on QTL analysis was further examined. Detecting a QTL with a large within-genotype variance was more difficult than with a small within-genotype variance. Most of the significant marker-QTL association was detectable when the recombination rate was less than 15%.

집락자료의 분할표에서 독립성검정 (Testing Independence in Contingency Tables with Clustered Data)

  • 정광모;이현영
    • 응용통계연구
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    • 제17권2호
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    • pp.337-346
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    • 2004
  • 랜덤표본에 관한 이원분할표의 독립성검정에는 통상 피어슨의 카이제곱적합도검정과 우도비검정을 사용한다. 그러나 랜덤표본이 아닌 집락자료에 관한 분할표의 경우에는 이들 검정법은 잘못된 결과를 나타낸다. 이러한 경우에는 공변량의 고정효과 외에 집락에 따른 변량효과를 함께 포함하는 일반화선형혼합모형을 고려함으로써 집락간의 이질성과 집락내의 종속성을 반영할 수 있다. 본 연구에서는 집락자료의 분할표에 대한 일반화선형혼합모형을 소개하고 실례를 통하여 이들 모형의 적합에 대해 논의한다.

Weighted zero-inflated Poisson mixed model with an application to Medicaid utilization data

  • Lee, Sang Mee;Karrison, Theodore;Nocon, Robert S.;Huang, Elbert
    • Communications for Statistical Applications and Methods
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    • 제25권2호
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    • pp.173-184
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    • 2018
  • In medical or public health research, it is common to encounter clustered or longitudinal count data that exhibit excess zeros. For example, health care utilization data often have a multi-modal distribution with excess zeroes as well as a multilevel structure where patients are nested within physicians and hospitals. To analyze this type of data, zero-inflated count models with mixed effects have been developed where a count response variable is assumed to be distributed as a mixture of a Poisson or negative binomial and a distribution with a point mass of zeros that include random effects. However, no study has considered a situation where data are also censored due to the finite nature of the observation period or follow-up. In this paper, we present a weighted version of zero-inflated Poisson model with random effects accounting for variable individual follow-up times. We suggested two different types of weight function. The performance of the proposed model is evaluated and compared to a standard zero-inflated mixed model through simulation studies. This approach is then applied to Medicaid data analysis.

Synergistic effect of a mixed herbal extract on bone loss in ovariectomized (OVX) rats

  • Ha , Hye-Kyung;Lee, Je-Hyun;Lee, Han-Gu;Song, Kye-Yong;Kim, Chung-Sook
    • 대한약학회:학술대회논문집
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    • 대한약학회 2002년도 Proceedings of the Convention of the Pharmaceutical Society of Korea Vol.2
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    • pp.385.3-386
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    • 2002
  • Current therapeutics for osteoporosis are often associated with adverse effects with long-term use. The purpose of this study was to find out herbal drug interaction and to apply an alternative drug candidate for osteoporosis based on a traditional medicinal herb that may have fewer side effects and less uterine hypertrophy. Effect of 219-H. a mixed herbal extract including Astragali Radix. was investigated on osteoporosis in vitro and in vivo models. (omitted)

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비선형 혼합효과 모형의 수간곡선 적용: 강원지방 소나무를 대상으로 (Applying Nonlinear Mixed-effects Models to Taper Equations: A Case Study of Pinus densiflora in Gangwon Province, Republic of Korea)

  • 신중훈;한희;고치웅;강진택;김영환
    • 한국산림과학회지
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    • 제111권1호
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    • pp.136-149
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    • 2022
  • 강원지방소나무의 수간곡선 추정에 비선형 혼합효과 모형(nonlinear mixed-effects models: NLME)을 적용하고 몇 가지 성능 척도를 이용하여 비선형 고정효과 모형과 비교하였다. 혼합효과 모형이 고정효과 모형을 개선한 정도를 전체 성능의 측면에서 설명하면, 수간직경에 대해서는 BIAS 26.4%, MAB 42.9%, RMSE 43.1%, FI 0.9%만큼이었고, 수간단면적에 대해서는 BIAS 67.7%, MAB 44.7%, RMSE 45.8%, FI 1.0%만큼이었다. 수간을 12개의 상대수고 구간으로 세분화하여 분석한 결과에서도 수간곡선의 성능은 혼합효과 모형에 의해 크게 개선된 것으로 나타났다. 혼합효과 모형은 모든 상대수고 구간에서 수간직경 및 수간단면적에 대한 성능이 고정효과 모형보다 더 나은 MAB, RMSE, FI를 나타내었고, BIAS의 경우 일부 구간(수간직경: 0.05, 0.2, 0.3, 0.8, 수간단면적: 0.05, 0.3, 0.5, 0.6, 1.0)에서만 고정효과 모형보다 뒤떨어지는 것으로 확인되었다. 특히 지상에 근접한 수간 최하부(수고 0.2 m 지점)에서 수간직경 및 수간단면적 추정 성능이 혼합효과 모형에 의해 크게 향상되었다. 수간직경의 경우 BIAS 84.2%, MAB 69.8%, RMSE 68.7%, FI 3.1%, 수간단면적의 경우 BIAS 98.5%, MAB 70.1%, RMSE 68.7%, FI 3.1%만큼 향상된 것으로 분석되었다. 지상으로부터 0.2 m 높이 지점의 수간단면적이 수간단면적 전체에서 차지하는 비중은 22.7%에 달하였다. 이렇게 수간재적에서 가장 큰 비중을 차지하는 수간 최하부에서의 추정 성능이 크게 향상되었다는 것은 전체 수간재적의 추정 성능 역시 큰 폭으로 향상될 수 있음을 시사한다. 비록 모형 적합 과정이 고정효과 모형보다 까다롭다는 단점이 있지만, 추정 성능의 개선 효과를 고려하면 NLME를 수간곡선 추정의 표준적인 방법으로 사용하는 것을 검토할 필요가 있다.

Analysis of shallow footings rested on tensionless foundations using a mixed finite element model

  • Lezgy-Nazargah, M.;Mamazizi, A.;Khosravi, H.
    • Structural Engineering and Mechanics
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    • 제81권3호
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    • pp.379-394
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    • 2022
  • Shallow footings usually belonged to the category of thick plate structures. For accurate analysis of thick plates, the contribution of out-of-plane components of the stress tensor should be considered in the formulation. Most of the available shallow footing models are based on the classical plate theories, which usually neglect the effects of the out-of-plane stresses. In this study, a mixed-field plate finite element model (FEM) is developed for the analysis of shallow footings rested on soil foundations. In addition to displacement field variables, the out-of-plane components of the stress tensor are also assumed as a priori unknown variables. For modeling the interaction effect of the soil under and outside of the shallow footings, the modified Vlasov theory is used. The tensionless nature of the supporting soil foundation is taken into account by adopting an incremental, iterative procedure. The equality requirement of displacements at the interface between the shallow footing and soil is fulfilled using the penalty approach. For validation of the present mixed FEM, the obtained results are compared with the results of 3D FEM and previous results published in the literature. The comparisons show the present mixed FEM is an efficient and accurate tool for solving the problems of shallow footings rested on subsoil.

Large eddy simulations of the flow around a circular cylinder: effects of grid resolution and subgrid scale modeling

  • Salvatici, E.;Salvetti, M.V.
    • Wind and Structures
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    • 제6권6호
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    • pp.419-436
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    • 2003
  • Large-eddy simulations of the flow around a circular cylinder at a Reynolds number, based on cylinder diameter and free-stream velocity, $Re_D=2{\times}10^4$ are presented. Three different dynamic subgrid-scale models are used, viz. the dynamic eddy-viscosity model and two different mixed two-parameter models. The sensitivity to grid refinement in the spanwise and radial directions is systematically investigated. For the highest resolution considered, the effects of subgrid-scale modeling are also discussed in detail. In particular, it is shown that SGS modeling has a significant influence on the low-frequency modulations of the aerodynamics loads, which are related to significant changes in the near wake structure.

아동·청소년기 여학생의 가정 및 학교 폭력이 우울에 미치는 영향 : 혼합모형을 이용한 종단자료 분석 (How depression affects girls who experienced violence in home or at school: Using mixed model)

  • 민대기;최미경
    • Journal of the Korean Data and Information Science Society
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    • 제27권1호
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    • pp.101-110
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    • 2016
  • 우울은 스트레스의 적응과정에서 나타나는 신체적 증상과 더불어, 근심, 침울함, 실패감, 무력감과 같은 심리적 증상을 나타내는 정신적 상태로, 우울의 경험 정도에 따라 개인에게 인지, 정서, 그리고 행동장애를 야기할 수 있다. 특히, 성장기에 경험하는 우울은 아동, 청소년들의 학업에 대한 집중력을 저하시키며, 폭력성 및 대인관계의 문제를 증가시켜 개인과 사회에 심각한 손실을 끼칠 수도 있다. 따라서 아동, 청소년들의 심리적 발달과정에 대한 사회적 관심과 적절한 대응방안이 요구된다. 본 연구는 이러한 배경을 근거로 여학생들의 성장과정에서 겪는 가정과 학교에서의 폭력 피해 경험이 우울에 어떠한 영향을 미치는지를 혼합모형을 이용하여 분석하였다.