• 제목/요약/키워드: Microbial Transformation

검색결과 84건 처리시간 0.025초

Characterization of Kinetics of Urea Hydrolysis in A Newly Reclaimed Tidal Soils

  • Kim, Hye-Jin;Park, Mi-Suk;Woo, Hyun-Nyung;Kim, Gi-Rim;Chung, Doug-Young
    • 한국토양비료학회지
    • /
    • 제44권1호
    • /
    • pp.84-90
    • /
    • 2011
  • It is imperative to study the hydrolysis of urea in high saline-sodic condition of a newly reclaimed tidal land in order to overcome the problems associated with use of urea fertilizer. The methodology adopted in this study tried to get a convenient way of estimating rate for N transformation needed in N fate and transport studies by reviewing pH and salt contents which can affect the microbial activity which is closely related to the rate of urea hydrolysis. The hydrolysis of urea over time follows first-order kinetics and soil urease activity in reclaimed soils will be represented by Michaelis-Menten-type kinetics. However, high pH and less microorganisms may delay the hydrolysis of urea due to decrease in urease activity with increasing pH. Therefore, the rate of urea hydrolysis should adopt $V_{max}$ referring enzyme activity ($E_0$) accounting for urease concentration which is indicative for urea hydrolysis, especially in a high saline and sodic soils.

Tissue culture of medicinal plants: micropropagation, transformation and production of useful secondary metabolites

  • Yoshimatsu, Kayo
    • 한국식물생명공학회:학술대회논문집
    • /
    • 한국식물생명공학회 2005년도 추계학술대회 및 한일 식물생명공학 심포지엄
    • /
    • pp.88-94
    • /
    • 2005
  • Plant tissue culture studies have been done for the preservation of medicinal plant resources and efficient production of pharmaceutically important secondary metabolites. Micropropagation methods for Cephaelis ipecacuanha have been established and these methods enabled much more efficient propagation of the plants than the conventional methods using seedling or layering. The C. ipecacuanha plants derived from tissue culture grew uniformly in the field and they showed higher alkaloid contents compared to the plants grown from seedlings. Hairy root cultures of C. ipecacuanha and Panax ginseng have been established by infection with Agrobacterium rhizogenes, and the production of important pharmaceuticals by these cultures have been successfully demonstrated. In the case of C. ipecacuanha, the highest alkaloid yields from the hairy roots cultured for 8 weeks were 2.75-fold cephaeline (5.5 mg) and one third emetine (0.7 mg) compared with those from the roots of one-year old plant propagated through shoot-tip culture and cultivated in a greenhouse (2.0 mg cephaeline and 2.0 mg emetine). In the case of P. ginseng, ginsenoside contents in the hairy roots optimally cultured for 4 weeks were much higher than those in the roots of 4-year old field-grown plant. Thus our medicinal plant tissue cultures demonstrate desirable properties. However, they are always exposed to danger of microbial contamination or unexpected trouble of culture facilities. Cryopreservation of plant tissue cultures is a reliable method for long-term preservation. Cryopreservation studies on these cultures are also presented.

  • PDF

Environmental Sustainability and Social Desirability Issues in Pig Feeding

  • Yang, T.S.
    • Asian-Australasian Journal of Animal Sciences
    • /
    • 제20권4호
    • /
    • pp.605-614
    • /
    • 2007
  • Feeding pigs used to be a means of managing domestic resources that may otherwise have been wasted into valuable animal protein. Feeding pigs thus was a form of husbandry. Following recent rapid industrial development, pig rearing has changed from extensive to intensive, but this transformation has been associated with major concerns. The concentration of large amounts of pig manure in small arrears is environmentally hazardous. Moreover, high densities of animals in intensive production systems also impose a health threat for both animals and humans. Furthermore, the use of growth promoters and preventive medicines for higher production efficiencies, such as in-feed antibiotics, also induces microbial resistance thus affects human therapeutics. In addition, consumers are questioning the ethics of treating animals in intensive production systems. Animal welfare, environmental and bio-safe issues are re-shaping the nature of pig production systems. Feeding pigs thus involves not only the consideration of economic traits, but also welfare traits and environmental traits. Thus, a focus on technological feasibility, environmental sustainability and social desirability is essential for successful feeding operations. Feeding pigs now involves multiple projects with different sustainability goals, but goal conflicts exist since no pattern or scenario can fulfill all sustainability goals and the disagreements are complicated by reduced or even no use of in-feed antibiotics. Thus it is difficult to feed pigs in a manner that meets all goals of high quality, safe product, eco- and bio-sustainability, animal welfare and profit. A sustainable pig production system thus requires a prioritization of goals based on understanding among consumers, society and producers and needs to view from both a local and global perspective.

Pseudomonas sp. BCNU 106의 persolvent fermentation에 의한 인디고이드계 색소 생산 (Production of Indigoid Pigments by Persolvent Fermentation with Pseudomonas putida BCNU 106)

  • 최혜정;권기석;주우홍
    • 생명과학회지
    • /
    • 제24권1호
    • /
    • pp.81-85
    • /
    • 2014
  • 산업폐수로부터 분리한 Pseudomonas sp. BCNU 106은 다양한 유기용매를 이용하여 인돌로부터 인디고를 합성할 수 있다. BCNU 106은 높은 수준의 인돌과 다량의 p-xylene, propylbenzene 그리고 mesitylene의 존재 하에서 효과적으로 인디고를 생산했다. 본 연구에서 인디고의 최대수율 조건은 20% (v/w)의 p-xylene과 4 g/l의 인돌인 것으로 확인되었다. 이러한 조건에서 인디고의 수율과 인돌의 전환효율은 각각 315.5 mg/l와 97%로 조사되었다. 그 결과 Pseudomonas sp. BCNU 106은 산업적으로 중요한 인디고 생산을 위한 잠재적인 균주가 될 것으로 판단된다.

외부탄소원으로 활성화된 토착미생물에 의한 화약물질(TNT and RDX) 분해 최적화 (Optimization of Explosive Compounds (TNT and RDX) Biodegradation by Indigenous Microorganisms Activated by External Carbon Source)

  • 박지은;배범한
    • 한국지하수토양환경학회지:지하수토양환경
    • /
    • 제19권3호
    • /
    • pp.56-65
    • /
    • 2014
  • Contamination of explosive compounds in the soils of military shooting range may pose risks to human and ecosystems. As shooting ranges are located at remote places, active remediation processes with hardwares and equipments are less practical to implement than natural solutions such as bioremediaton. In this study, a series of experiments was conducted to select a suitable carbon source and to optimize dosing rate for the enhanced bioremediation of explosive compounds in surface soils and sediments of shooting ranges with indigenous microorganisms activated by external carbon source. Treatability study using slurry phase reactors showed that the presence of indigenous microbial community capable of explosive compounds degradation in the shooting range soils, and starch was a more effective carbon source than glucose and acetic acid in the removal of TNT. However, at higher starch/soil ratio, i.e., 2.0, the acute toxicity of the liquid phase increased possibly due to transformation products of TNT. RDX degradation by indigenous microorganisms was also stimulated by the addition of starch but the acute toxicity of the liquid phase decreased with the increase of starch/soil ratio. Taken together, the optimum range of starch/soil ratio for the degradation of explosive compounds without significant increase in acute toxicity was found to be 0.2 of starch/soil.

Field Studios of In-situ Aerobic Cometabolism of Chlorinated Aliphatic Hydrocarbons

  • Semprini, Lewts
    • 한국지하수토양환경학회:학술대회논문집
    • /
    • 한국지하수토양환경학회 2004년도 총회 및 춘계학술발표회
    • /
    • pp.3-4
    • /
    • 2004
  • Results will be presented from two field studies that evaluated the in-situ treatment of chlorinated aliphatic hydrocarbons (CAHs) using aerobic cometabolism. In the first study, a cometabolic air sparging (CAS) demonstration was conducted at McClellan Air Force Base (AFB), California, to treat chlorinated aliphatic hydrocarbons (CAHs) in groundwater using propane as the cometabolic substrate. A propane-biostimulated zone was sparged with a propane/air mixture and a control zone was sparged with air alone. Propane-utilizers were effectively stimulated in the saturated zone with repeated intermediate sparging of propane and air. Propane delivery, however, was not uniform, with propane mainly observed in down-gradient observation wells. Trichloroethene (TCE), cis-1, 2-dichloroethene (c-DCE), and dissolved oxygen (DO) concentration levels decreased in proportion with propane usage, with c-DCE decreasing more rapidly than TCE. The more rapid removal of c-DCE indicated biotransformation and not just physical removal by stripping. Propane utilization rates and rates of CAH removal slowed after three to four months of repeated propane additions, which coincided with tile depletion of nitrogen (as nitrate). Ammonia was then added to the propane/air mixture as a nitrogen source. After a six-month period between propane additions, rapid propane-utilization was observed. Nitrate was present due to groundwater flow into the treatment zone and/or by the oxidation of tile previously injected ammonia. In the propane-stimulated zone, c-DCE concentrations decreased below tile detection limit (1 $\mu$g/L), and TCE concentrations ranged from less than 5 $\mu$g/L to 30 $\mu$g/L, representing removals of 90 to 97%. In the air sparged control zone, TCE was removed at only two monitoring locations nearest the sparge-well, to concentrations of 15 $\mu$g/L and 60 $\mu$g/L. The responses indicate that stripping as well as biological treatment were responsible for the removal of contaminants in the biostimulated zone, with biostimulation enhancing removals to lower contaminant levels. As part of that study bacterial population shifts that occurred in the groundwater during CAS and air sparging control were evaluated by length heterogeneity polymerase chain reaction (LH-PCR) fragment analysis. The results showed that an organism(5) that had a fragment size of 385 base pairs (385 bp) was positively correlated with propane removal rates. The 385 bp fragment consisted of up to 83% of the total fragments in the analysis when propane removal rates peaked. A 16S rRNA clone library made from the bacteria sampled in propane sparged groundwater included clones of a TM7 division bacterium that had a 385bp LH-PCR fragment; no other bacterial species with this fragment size were detected. Both propane removal rates and the 385bp LH-PCR fragment decreased as nitrate levels in the groundwater decreased. In the second study the potential for bioaugmentation of a butane culture was evaluated in a series of field tests conducted at the Moffett Field Air Station in California. A butane-utilizing mixed culture that was effective in transforming 1, 1-dichloroethene (1, 1-DCE), 1, 1, 1-trichloroethane (1, 1, 1-TCA), and 1, 1-dichloroethane (1, 1-DCA) was added to the saturated zone at the test site. This mixture of contaminants was evaluated since they are often present as together as the result of 1, 1, 1-TCA contamination and the abiotic and biotic transformation of 1, 1, 1-TCA to 1, 1-DCE and 1, 1-DCA. Model simulations were performed prior to the initiation of the field study. The simulations were performed with a transport code that included processes for in-situ cometabolism, including microbial growth and decay, substrate and oxygen utilization, and the cometabolism of dual contaminants (1, 1-DCE and 1, 1, 1-TCA). Based on the results of detailed kinetic studies with the culture, cometabolic transformation kinetics were incorporated that butane mixed-inhibition on 1, 1-DCE and 1, 1, 1-TCA transformation, and competitive inhibition of 1, 1-DCE and 1, 1, 1-TCA on butane utilization. A transformation capacity term was also included in the model formation that results in cell loss due to contaminant transformation. Parameters for the model simulations were determined independently in kinetic studies with the butane-utilizing culture and through batch microcosm tests with groundwater and aquifer solids from the field test zone with the butane-utilizing culture added. In microcosm tests, the model simulated well the repetitive utilization of butane and cometabolism of 1.1, 1-TCA and 1, 1-DCE, as well as the transformation of 1, 1-DCE as it was repeatedly transformed at increased aqueous concentrations. Model simulations were then performed under the transport conditions of the field test to explore the effects of the bioaugmentation dose and the response of the system to tile biostimulation with alternating pulses of dissolved butane and oxygen in the presence of 1, 1-DCE (50 $\mu$g/L) and 1, 1, 1-TCA (250 $\mu$g/L). A uniform aquifer bioaugmentation dose of 0.5 mg/L of cells resulted in complete utilization of the butane 2-meters downgradient of the injection well within 200-hrs of bioaugmentation and butane addition. 1, 1-DCE was much more rapidly transformed than 1, 1, 1-TCA, and efficient 1, 1, 1-TCA removal occurred only after 1, 1-DCE and butane were decreased in concentration. The simulations demonstrated the strong inhibition of both 1, 1-DCE and butane on 1, 1, 1-TCA transformation, and the more rapid 1, 1-DCE transformation kinetics. Results of tile field demonstration indicated that bioaugmentation was successfully implemented; however it was difficult to maintain effective treatment for long periods of time (50 days or more). The demonstration showed that the bioaugmented experimental leg effectively transformed 1, 1-DCE and 1, 1-DCA, and was somewhat effective in transforming 1, 1, 1-TCA. The indigenous experimental leg treated in the same way as the bioaugmented leg was much less effective in treating the contaminant mixture. The best operating performance was achieved in the bioaugmented leg with about over 90%, 80%, 60 % removal for 1, 1-DCE, 1, 1-DCA, and 1, 1, 1-TCA, respectively. Molecular methods were used to track and enumerate the bioaugmented culture in the test zone. Real Time PCR analysis was used to on enumerate the bioaugmented culture. The results show higher numbers of the bioaugmented microorganisms were present in the treatment zone groundwater when the contaminants were being effective transformed. A decrease in these numbers was associated with a reduction in treatment performance. The results of the field tests indicated that although bioaugmentation can be successfully implemented, competition for the growth substrate (butane) by the indigenous microorganisms likely lead to the decrease in long-term performance.

  • PDF

Hexachlorobenzene Dechlorination Ability of Microbes from Canal and Estuary Sediments

  • Anotai, Jin;Voranisarakul, J.;Wantichapichat, W.;Chen, I.M.
    • 한국습지학회지
    • /
    • 제9권1호
    • /
    • pp.107-114
    • /
    • 2007
  • This study aimed to investigate the hexachlorobenzene (HCB) dechlorinating ability of sediment microbes collected from a natural canal receiving secondary effluents from an industrial estate and nearby factories. Nine sites along the stream and one in the estuary in the Gulf of Thailand into which the canal spills were specified and sampling for sediment and water. Preliminary analysis of the sediments showed that the first four sites nearest to the discharging location were contaminated by HCB within the range of 0.18 to 1.25 ppm. Apart from that, 1,3,5-trichlorobenzene which has never been commercially produced or used in any manufacturing processes except for the transformation from higher chlorinated benzene was also identified in the range of 0.16 to 0.24 ppm. This suggested a possibility of sporadically HCB contamination in this stream. Of more important, people in the community along this canal earn their living by coastal fishery; hence, posing a risk of spreading HCB and its less chlorinated congeners via food chain from caught marine creatures to human. As a result, there is an urgent need to understand the behavior of HCB dechlorination in this stream sediment which can lead to a clean-up action in the future. Serum bottles with sediment slurries (sediment to water ratio of 1:1 (v/v) and filtered to remove particles larger than 0.7 mm) from each site were inoculated with 2 mg/l of HCB, kept anaerobically in the dark at room temperature without any nourishment, and analyzed for HCB and its less-chlorinated congeners every 6 days. Total chemical oxygen demand, suspended solids, and volatile suspended solids were in the range of 21,492-73,584, 158,100-518,100 and 6,000-32,700 mg/l, respectively. It was found that all sediment slurries began to dechlorinate HCB in 12 to 30 days and the HCB was completely removed within 42 to 60 days or so. On the other hand, there was no HCB dechlorination occurred in the controlled set which was sterilized by autoclaving prior to the addition of HCB. This implies that the HCB transformation was solely due to microorganisms' activities. HCB was dechlorinated principally via pentachlolobenzene to 1,2,3,5-tetrachlorobenzene and terminated at 1,3,5-trichlorobenzene which is the major pathway as reported by many researchers. Dichlorobenzene has not been detected in any samples within the dechlorination period of 60 days. The results indicate that the microbial matrix in the sediment of this stream has an outstanding capability to dechlorinate HCB. Existing substrates and nutrients which mainly sorbed onto the solid phase and the typical temperature in Thailand were sufficient and suitable to promote the activities of these HCB-dechlorinating microbes.

  • PDF

목화 Glutathione S-Transferase (GST) 유전자로 형질 전환된 현삼의 내병성 특성 (Pathogene Resistance of cotton GST cDNA in Transgenic Scrophularia buergeriana Misrule)

  • 강원희;임정대;이성호;유창연
    • 식물조직배양학회지
    • /
    • 제28권6호
    • /
    • pp.297-304
    • /
    • 2001
  • 현삼의 기내배양에서 TDZ처리가 비교적 재분화에 효율적이었고 형질전환 식물체를 선발하기 위하여 선발표지 유전자로 사용되는 NPTII gene이 항생제 kanamycin에 대한 저항성은 50 mg/L가 적당하였다. 선발배지에서 자란 현삼 식물체에서 DNA를 추출하여 PCR 분석을 통하여 특정 유전자 Gh-5 gene을 검정한 결과 형질전환되지 않은 식물체에서는 볼수가 없는 988 bp의 band가 형질전환된 식물체에서는 관찰되어 GST 유전자가 현삼의 염색체 안으로 삽입되었음을 확인하였다. 형질전환 효율 증진을 위하여 선발과정에서 암상태를 30일까지 유지할 경우 높은 형질전환 효율을 나타내었으나 그 이상의 처리는 오히려 형질전환 효율이 감소하는 결과를 나타내었다 (Table 5). 형질전환 식물체에서 GST의 활성이 형질전환 되지 않은 식물체의 2배로 나타났고 유도체의 적정 처리 농도는 50$\mu$M이며 유도체 처리 시간에 따라서는 12시간까지는 점차적으로 높아지는 경향이었으나 그 이상의 시간에서는 활성이 저하됨이 확인되었다. Fungus 피검균인 Asperigillus awamori에서 6, 12시간 처리 시 비교적 높은 활성을 보여주었으며 그 이상의 시간처리에서는 명확한 균사 억제를 나타내지 못하였으며, 특히 12시간에서 상대적으로 높은 활성을 나타내었다. Cladosporium herbarum에서 형질전환된 식물체의 활성이 훨씬 높게 나타났으며 6시간 처리에서 다른 처리에 비하여 높은 활성을 나타내었다. 피검균인 Saccharomyces cerevisiae에서는 형질전환 식물체에서 높은 활성을 보여주었으며 6, 12시간 처리에서 비슷하게 높은 활성을 보여 주었다. 박테리아 피검균 Bacillus subtillis에서는 50$\mu$M 이하의 유도체 처리에서 비교적 높은 활성을 나타내었다.

  • PDF

생지화학적 스멕타이트-일라이트 반응에 관한 고찰 (Review of Microbially Mediated Smectite-illite Reaction)

  • 김진욱
    • 자원환경지질
    • /
    • 제42권5호
    • /
    • pp.395-401
    • /
    • 2009
  • 스멕타이트-일라이트 (SI)의 전이 반응은 쇄설성 퇴적암 지역에 흔히 볼 수 있는 광물 반응이다. 지난 40여년 동안 SI 전이 반응의 중요성에 대한 논문들이 많이 출간되었는데 이는 스멕타이트가 일라이트로 변하는 정도 즉 "illitization" 이 석유의 개발, 퇴적물의 화학적 변화 및 물리적 성질변화 에 많은 연계성이 있기 때문이다. 기존의 S-I 상전이에 대한 메커니즘 연구에서는 layer-by-layer reaction 에 의한 solid state 반응 혹은 dissolution/precipitation 반응으로 집약되지만 박테리아 반응의 역할을 전혀 고려하지 않았다. 무산소 환경에서 박테리아와 점토광물의 반응에 대한 연구, 특히 스멕타이트와 철 환원 박테리아의 반응 작용에 대한 연구에서는 철 환원 박테리아가 스멕타이트 구조 속에 있는 철을 환원시켜 에너지를 얻는다고 밝혀졌다. 최근 발표된 논문들은 미생물의 철 환원 작용에 의하여 S-I 상전이가 일어날 수 있다고 보고되었는데, 이는 기존의 상전이에 대한 개념에 즉 고온, 고압, 오랜 시간이 S-I 전이의 필수 조건이라는 일반적인 해석에 반하는 것으로 새로운 연구 분야의 가능성을 시사하고 있다. 현재까지 발표된 논문에 의하면 박테리아가 S-I 반응을 촉진지킴으로 고온, 고압, 혹은 상당시간의 속성작용이 전제조건으로 작용하지 않을 수 있다는 가능성을 시사한다. 하지만 박테리아가 철을 환원함과 동시에 스멕타이트를 일라이트로 전이시킴에 있어서의 메커니즘에 대한 이해는 아직 미비하다. 따라서 이 논문에서는 현재까지 밝혀진 SI 반응을 살펴보고, 미생물 광물간의 반응작용에 있어서 연구 방법을 소개함을 목적으로 한다.

Standardization and Development of Pharmacopoeial Standard Operating Procedures (SOPs) of Classical Unani Formulation

  • Mannan, Mohd Nazir;Kazmi, Munawwar Husain;Zakir, Mohammad;Naikodi, Mohammed Abdul Rasheed;Zahid, Uzma;Siddiqui, Javed Inam
    • 셀메드
    • /
    • 제10권2호
    • /
    • pp.16.1-16.8
    • /
    • 2020
  • Standardization of drug deals with confirmation of drug identity and determination of drug quality and purity. Unani herbal formulations are used in traditional medicine for the treatment of various diseases. Cancer is a disease which causes abnormal, uncontrolled growth of body tissue or cells, which tend to proliferate in an uncontrolled way. Spread of cancer from site of origin to other organs of the body is called metastasis. It is a hyper proliferative disorder involving, transformation, dysregulation of apoptosis, invasion and angiogenesis. The present study aimed to standardize a classical Unani formulation (CUF) described as anticancer properties. The CUF has been used for anti-cancerous activity (Dāfi'-i-saraṭān) in human population by Unani physicians for centuries. The standardization parameters carried out for classical Unani formulation are pharmacognostical studies, physicochemical parameters, high-performance thin layer chromatography (HPTLC), microbial load, aflatoxins, and heavy metals revealing specific identities and to evaluate Pharmacopoeial standards. Experiment and the data obtained established the Pharmacopoeial standards for this formulation for identification and quality control purpose. The CUF has been successfully standardized and standard operating procedures (SOPs) for its preparation has been laid down which may serve as a standard reference in future. The standardization data of this formulation may be used as a standard guideline for preparation of the formulation in future.