• Title/Summary/Keyword: Mesh sizes

Search Result 198, Processing Time 0.02 seconds

DNA barcoding for fish species identification and diversity assessment in the Mae Tam reservoir, Thailand

  • Dutrudi Panprommin;Kanyanat Soontornprasit;Siriluck Tuncharoen;Santiwat Pithakpol;Korntip Kannika;Konlawad Wongta
    • Fisheries and Aquatic Sciences
    • /
    • v.26 no.9
    • /
    • pp.548-557
    • /
    • 2023
  • The purposes of this research were to identify fish species using DNA barcodes or partial sequences of cytochrome b (Cytb) and to assess the diversity of fish in the Mae Tam reservoir, Phayao province, Thailand. Fish samples were collected 3 times, during the winter, summer, and rainy seasons, from 2 sampling sites using gillnets with 3 mesh sizes (30, 50, and 70 mm). A total of 34 representative samples were classified into 12 species, 7 families and 6 orders by morphological- and DNA barcoding-based identifications. However, one cichlid species, Cichlasoma trimaculatum, could only be identified using DNA barcoding. Family Cyprinidae had the greatest diversity, 50.00%. The diversity, richness and evenness indices ranged from 0.43-0.65, 0.64-1.46, and 0.27-0.40, respectively, indicating that fish diversity at both sampling sites was relatively low. A comparison of the catch per unit effort (CPUE) with 3 different mesh sizes found that the 50 mm mesh size was the best (474.80 ± 171.56 g/100 m2/night), followed by the 70 mm (417.41 ± 176.24 g/100 m2/night) and 30 mm mesh sizes (327.88 ± 115.60 g/100 m2/night). These results indicate that DNA barcoding is a powerful tool for species identification. Our data can be used for planning the sustainable management of fisheries resources in the Mae Tam reservoir.

Mesh Reconstruction Using Redistibution of Nodes in Sub-domains and Its Application to the Analyses of Metal Forming Problems (영역별 절점재구성을 통한 격자재구성 및 소성가공해석)

  • Hong, Jin-Tae;Yang, Dong-Yol
    • Korean Journal of Computational Design and Engineering
    • /
    • v.12 no.4
    • /
    • pp.255-262
    • /
    • 2007
  • In the finite element analysis of forming process, objects are described with a finite number of elements and nodes and the approximated solutions can be obtained by the variational principle. One of the shortcomings of a finite element analysis is that the structure of mesh has become inefficient and unusable because discretization error increases as deformation proceeds due to severe distortion of elements. If the state of current mesh satisfies a certain remeshing criterion, analysis is stopped instantly and resumed with a reconstructed mesh. In the study, a new remeshing algorithm using tetrahedral elements has been developed, which is adapted to the desired mesh density. In order to reduce the discretization error, desired mesh sizes in each lesion of the workpiece are calculated using the Zinkiewicz and Zhu's a-posteriori error estimation scheme. The pre-constructed mesh is constructed based on the modified point insertion technique which is adapted to the density function. The object domain is divided into uniformly-sized sub-domains and the numbers of nodes in each sub-domain are redistributed, respectively. After finishing the redistribution process of nodes, a tetrahedral mesh is reconstructed with the redistributed nodes, which is adapted to the density map and resulting in good mesh quality. A goodness and adaptability of the constructed mesh is verified with a testing measure. The proposed remeshing technique is applied to the finite element analyses of forging processes.

Size selectivity of the net pot for common octopus Octopus minor used in the southern coastal sea of Korea

  • Kim, Seonghun;Park, Seongwook;Lee, Kyounghoon
    • Journal of the Korean Society of Fisheries and Ocean Technology
    • /
    • v.49 no.3
    • /
    • pp.200-207
    • /
    • 2013
  • This paper presents the mesh selectivity of a net pot for common octopus Octopus minor for the sustainable resources management of common octopus. The filed experiments were carried out the total 10 times in the southern part of coastal sea in Korea from March to May in 2010 using net pots of five different mesh sizes (16, 18, 20, 22 and 26mm). The test of size selectivity, indicated a 50% selection value on the logistic master curve of 3.195, whereby 50% of individuals with a mantle size of approximately 70.3mm selected a mesh size of 22mm. Considering that 50% of common octopus entering sexual maturity have a mantle size of 70.6mm, the optimum mesh size should be equal to, or larger than 22mm.

Catches of main species and bycatch according to the codend mesh sizes of stow net on anchor in the West Sea of Korea (서해안 안강망의 끝자루 망목크기에 따른 주요 어종의 어획과 혼획)

  • Cho, Sam-Kwang;Cha, Bong-Jin;Kim, Hyun-Young
    • Journal of the Korean Society of Fisheries and Ocean Technology
    • /
    • v.47 no.2
    • /
    • pp.88-98
    • /
    • 2011
  • Experimental fishing was carried out to compare the catches of main species and bycatch according to the codend mesh size (raschel, 15mm, 25mm, 35mm, 45mm) of stow net on anchor in the coastal waters of Seocheon after manufacturing five kinds of fishing gears and commercial fishing boat (7.93 tons) was used for it. Anchovy (Engraulis japonicus), southern rough shrimp (Trachysalambria curvirostris), beka squid (Loligo beka), cuttle fish (Sepia esculenta), swimming crab (Portunus trituberculatus) were dominant on the five kinds of experimental fishing gears. Southern rough shrimp was caught from all kinds of fishing gears and catches of anchovy was highest in the raschel codend, southern rough shrimp for 15mm, 25mm, 35mm codend and beka squid for 45mm codend. Bycatch proportion against total catches was 623,376g (28.7%) for 2,171,844g in raschel, 11,932g (1.7%) for 704,451g in 15mm, 3,616g (1.6%) for 221,432g in 25mm, 9,276g (4.9%) for 191,052g in 35mm and 2,724g (5.3%) for 51,431g in 45mm.

Topology Optimization Through Material Cloud Method (재료조각법을 이용한 위상최적설계)

  • Chang Su-Young;Youn Sung-Kie
    • Transactions of the Korean Society of Mechanical Engineers A
    • /
    • v.29 no.1 s.232
    • /
    • pp.22-29
    • /
    • 2005
  • A material cloud method, which is a new topology optimization method, is presented. In MCM, an optimal structure can be found out by manipulating sizes and positions of material clouds, which are lumps of material with specified properties. A numerical analysis for a specific distribution of material clouds is carried out using fixed background finite element mesh. Optimal material distribution can be element-wisely extracted from material clouds' distribution. In MCM, an expansion-reduction procedure of design domain for finding out better optimal solution can be naturally realized. Also the convergence of material distribution is faster and well-defined material distribution with fewer intermediate densities can be obtained. In addition, the control of minimum-member sizes in the material distribution can be realized to some extent. In this paper, basic concept of MCM is introduced, and formulation and optimization results of MCM are compared with those of the traditional density distribution method(DDM).

An experimental study on the mesh size selectivity for whelk (Buccinum opisthoplectum) (세고리물레고둥(Buccinum opisthoplectum)의 망목 크기 선택성에 대한 실험적 고찰)

  • KIM, Seonghun;JUNG, Jung-Mo;BAEK, Sena
    • Journal of the Korean Society of Fisheries and Ocean Technology
    • /
    • v.58 no.1
    • /
    • pp.1-9
    • /
    • 2022
  • In this study, the selection action on the mesh in the net pot for whelk (Buccinum opisthoplectum) is experimentally considered, and the selectivity was compared by the SELECT model and the Nashimoto's method with the probability model according to the contact shape of the mesh and the whelk. The experiments of the mesh size selectivity was conducted for two mesh sizes: 70 mm (inner stretched size 65.4 mm) and 44 mm (inner stretched size 39.5 mm). Selectivity experiments were conducted three times in total for each mesh size used 264 whelks. In addition, Nashimoto's method analyzed the retention probability using probability model for whether the mesh passed or not based on the carapace width of the whelk. As a result of the selectivity analysis, the 50% selection carapace width for the mesh size of 70 mm was similar to 43.62 mm in the SELECT model and 42.64 mm in the Nashimoto's method. However, the 44 mm mesh with relatively small mesh size showed differences of 40.01 mm and 26.80 mm, respectively. As for the mesh size selectivity of whelk, it was found that the smaller the mesh size, the lower the selectivity. In addition, in the selectivity study on the mesh size of whelk, an evaluation method that closely considers the contact shape between the mesh and the target species is required.

A study on the mesh selectivity of hairtail (Trichiurus lepturus) caught by coastal drift gill net (연안 유자망에 의한 갈치(Trichiurus lepturus)의 망목 선택성에 관한 연구)

  • KIM, Seonghun;KIM, Pyungkwan;JEONG, Seong-Jae;LEE, Kyounghoon;OH, Wooseok
    • Journal of the Korean Society of Fisheries and Ocean Technology
    • /
    • v.55 no.4
    • /
    • pp.285-293
    • /
    • 2019
  • The mesh selectivity of hairtail (Trichiurus lepturus) caught by coastal drift gill net was examined in field experiments with three different mesh sizes (45, 50 and 55 mm) from October to November, 2013 in the coastal areas of south-west of Jeju province. The mesh selectivity tests were conducted with the experimental net to be set middle part of conventional driftnets. The mesh selectivity tests were carried out the total of four times. The selectivity curve was estimated by the Kitahara's and Fujimori's method. In the results, the catch number of hairtail was 653 (125.8 kg) and occupied 34.8% in total catches weight. The optimal mesh size for 50% selection on the minimum landing size (180 mm, AL) and the first maturity size (260 mm, AL) of hairtail were estimated as 47.2 mm and 64.5 mm by master selectivity curves, respectively.

A study on the bycatches by mesh size of spring-net-pot in Geo-je & Tong-young waters of Korea (거제·통영해역 스프링그물통발의 망목별 혼획 연구)

  • Cha, Bong-Jin;Cho, Sam-Kwang;Lee, Gun-Ho
    • Journal of the Korean Society of Fisheries and Ocean Technology
    • /
    • v.46 no.3
    • /
    • pp.204-213
    • /
    • 2010
  • Test fishing was carried out using six kinds of different mesh sizes (20, 22, 24, 28, 35, 40mm) for springnet-pot to study bycatches according to the mesh size and catches survey was done for another one (mesh size : 22mm, entrance round : 350mm) in Geo-je & Tong-young waters of Korea. On the first sea experiment, it was thought that suitable mesh size of spring-net-pot catching conger-eel over 35cm with decreasing the catches of conger-eel (Conger myriaster) below 35cm was 24mm. On the second sea experiment, commercial catches were crabs (Charybdis bimaculata), octopus minor (Octopus variabilis) and others including conger-eel, and catches proportion was 60% of total catches weights. There was no big difference for the monthly catches. Self-consumption catches were 9 species including conger-eel below 35cm holding 50% of catches in the side of weights. There were 40% of bycatches for the catches weights and 63% for catches numbers in the 22mm mesh size of spring-net-pot having entrance round over 140mm. It showed that 50% of catches weights were discarded.

Sensitivity analysis for finite element modeling of humeral bone and cartilage

  • Bola, Ana M.;Ramos, A.;Simoes, J.A
    • Biomaterials and Biomechanics in Bioengineering
    • /
    • v.3 no.2
    • /
    • pp.71-84
    • /
    • 2016
  • The finite element method is wide used in simulation in the biomechanical structures, but a lack of studies concerning finite element mesh quality in biomechanics is a reality. The present study intends to analyze the importance of the mesh quality in the finite element model results from humeral structure. A sensitivity analysis of finite element models (FEM) is presented for the humeral bone and cartilage structures. The geometry of bone and cartilage was acquired from CT scan and geometry reconstructed. The study includes 54 models from same bone geometry, with different mesh densities, constructed with tetrahedral linear elements. A finite element simulation representing the glenohumeral-joint reaction force applied on the humerus during $90^{\circ}$ abduction, with external load as the critical condition. Results from the finite element models suggest a mesh with 1.5 mm, 0.8 mm and 0.6 mm as suitable mesh sizes for cortical bone, trabecular bone and humeral cartilage, respectively. Relatively to the higher minimum principal strains are located at the proximal humerus diaphysis, and its highest value is found at the trabecular bone neck. The present study indicates the minimum mesh size in the finite element analyses in humeral structure. The cortical and trabecular bone, as well as cartilage, may not be correctly represented by meshes of the same size. The strain results presented the critical regions during the $90^{\circ}$ abduction.