• 제목/요약/키워드: Medical Image Segmentation

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Optimize KNN Algorithm for Cerebrospinal Fluid Cell Diseases

  • Soobia Saeed;Afnizanfaizal Abdullah;NZ Jhanjhi
    • International Journal of Computer Science & Network Security
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    • 제24권2호
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    • pp.43-52
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    • 2024
  • Medical imaginings assume a important part in the analysis of tumors and cerebrospinal fluid (CSF) leak. Magnetic resonance imaging (MRI) is an image segmentation technology, which shows an angular sectional perspective of the body which provides convenience to medical specialists to examine the patients. The images generated by MRI are detailed, which enable medical specialists to identify affected areas to help them diagnose disease. MRI imaging is usually a basic part of diagnostic and treatment. In this research, we propose new techniques using the 4D-MRI image segmentation process to detect the brain tumor in the skull. We identify the issues related to the quality of cerebrum disease images or CSF leakage (discover fluid inside the brain). The aim of this research is to construct a framework that can identify cancer-damaged areas to be isolated from non-tumor. We use 4D image light field segmentation, which is followed by MATLAB modeling techniques, and measure the size of brain-damaged cells deep inside CSF. Data is usually collected from the support vector machine (SVM) tool using MATLAB's included K-Nearest Neighbor (KNN) algorithm. We propose a 4D light field tool (LFT) modulation method that can be used for the light editing field application. Depending on the input of the user, an objective evaluation of each ray is evaluated using the KNN to maintain the 4D frequency (redundancy). These light fields' approaches can help increase the efficiency of device segmentation and light field composite pipeline editing, as they minimize boundary artefacts.

영상처리 기법을 이용한 의료 영상에서 관심영역 추출 알고리즘 (Algorithm for extracting region of interest in medical images using image processing techniques)

  • 조영복;우성희
    • 한국정보통신학회:학술대회논문집
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    • 한국정보통신학회 2018년도 추계학술대회
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    • pp.295-298
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    • 2018
  • 제안 논문은 의료영상을 대상으로 영상처리 기법을 이용해 관심영역을 자동 추출하는 알고리즘을 제안한다. 일반적으로 강건한 경계선 분할 기법은 잡음 영상에서 영상 특성과 방향성을 고려한 경계선의 최적 분할을 통해 영상 획득 시 발생하는 다양한 잡음과 방향을 갖는 대상 경계선에서 강건하고 정확한 분할 결과를 제공한다. 본 논문에서는 영상 대상의 구조적 정보에 적응적인 필터 유형과 크기가 가능하고 다양한 대상 객체의 경계선 분할에 적용할 수 있다. 또한, 초음파 영상, 이나 광학 영상 등의 다양한 잡음 영상에서의 경계선 분할이 가능하다.

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간 전이 암 환자의 18F-FDG PET 기반 종양 영역 정의: 영상 인자와 자동 영상 분할 기법 간의 관계분석 (Definition of Tumor Volume Based on 18F-Fludeoxyglucose Positron Emission Tomography in Radiation Therapy for Liver Metastases: An Relational Analysis Study between Image Parameters and Image Segmentation Methods)

  • 김희진;박승우;정해조;김미숙;유형준;지영훈;이철영;김금배
    • 한국의학물리학회지:의학물리
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    • 제24권2호
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    • pp.99-107
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    • 2013
  • 간 전이 암은 이전에는 수술을 통한 외과적 절제가 주요 치료기법이었지만 방사선 치료 기법의 발전으로 인해 점차 방사선치료의 시행이 늘어나고 있다. 18F-FDG PET 영상은 간 전이 암 진단 시 더욱 우세한 민감도와 특이도를 보이며, 치료계획용 CT 영상과 더불어 종양조직의 위치를 정의하는 중요한 영상장비로 자리매김하고 있다. 본 연구에서는 간 전이 암의 18F-FDG PET 영상에 나타난 종양영역을 영상분할기법 적용하였으며 PET영상의 여러 인자들이 영상분할기법들에 미치는 영향을 알아보았다. 2009년부터 2012년까지 방사선 치료를 받은 간전이 환자들 중 18F-FDG PET/CT 촬영을 시행한 13명의 환자들의 치료계획용 CT와 PET/CT 영상을 얻었다. 그 뒤 PET 영상의 관심영역을 설정하기 위하여 3가지 영상 분할 기법인 상대적문턱기법, 기울기기법, 영역성장기법을 적용하였다. 이 결과들을 바탕으로 GTV와 각 영상 기법으로 구현된 종양 영역과 부피 비교를 시행하였으며 영상 분할 기법에 영향을 미치는 영상인자들과의 관계를 회귀 분석하였다. GTV (Gross Tumor Volume)의 평균 부피는 $60.9{\pm}65.9$ cc이며, 40% 상대적문턱값 기법은 $22.43{\pm}35.3$ cc, 50% 상대적문턱값 기법은 $10.11{\pm}17.9$ cc, 영역성장기법은 $32.89{\pm}36.8$ cc, 기울기기법은 $30.34{\pm}35.8$ cc로 나타났다. 기존의 GTV와 가장 유사한 영역을 나타낸 영상 분할 기법은 영역성장기법 이었다. 이 영역성장기법에 영향을 미치는 영상인자를 정량적으로 분석하기 위해 표준화 계수 ${\beta}$값을 이용하였으며, GTV의 크기, $TumorSUV_{MAX/MIN}$, $SUV_{max}$, TBR 순으로 나타났다. 이와 같은 PET 영상인자를 반영한 영상 분할 기법을 이용해서 종양 영역을 정의한다면 보다 정확하고 일관성 있는 종양그리기를 수행할 수 있으며 궁극적으로 종양에 최적화된 방사선량을 투여할 수 있을 것이다.

DA-Res2Net: a novel Densely connected residual Attention network for image semantic segmentation

  • Zhao, Xiaopin;Liu, Weibin;Xing, Weiwei;Wei, Xiang
    • KSII Transactions on Internet and Information Systems (TIIS)
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    • 제14권11호
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    • pp.4426-4442
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    • 2020
  • Since scene segmentation is becoming a hot topic in the field of autonomous driving and medical image analysis, researchers are actively trying new methods to improve segmentation accuracy. At present, the main issues in image semantic segmentation are intra-class inconsistency and inter-class indistinction. From our analysis, the lack of global information as well as macroscopic discrimination on the object are the two main reasons. In this paper, we propose a Densely connected residual Attention network (DA-Res2Net) which consists of a dense residual network and channel attention guidance module to deal with these problems and improve the accuracy of image segmentation. Specifically, in order to make the extracted features equipped with stronger multi-scale characteristics, a densely connected residual network is proposed as a feature extractor. Furthermore, to improve the representativeness of each channel feature, we design a Channel-Attention-Guide module to make the model focusing on the high-level semantic features and low-level location features simultaneously. Experimental results show that the method achieves significant performance on various datasets. Compared to other state-of-the-art methods, the proposed method reaches the mean IOU accuracy of 83.2% on PASCAL VOC 2012 and 79.7% on Cityscapes dataset, respectively.

Accuracy evaluation of liver and tumor auto-segmentation in CT images using 2D CoordConv DeepLab V3+ model in radiotherapy

  • An, Na young;Kang, Young-nam
    • 대한의용생체공학회:의공학회지
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    • 제43권5호
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    • pp.341-352
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    • 2022
  • Medical image segmentation is the most important task in radiation therapy. Especially, when segmenting medical images, the liver is one of the most difficult organs to segment because it has various shapes and is close to other organs. Therefore, automatic segmentation of the liver in computed tomography (CT) images is a difficult task. Since tumors also have low contrast in surrounding tissues, and the shape, location, size, and number of tumors vary from patient to patient, accurate tumor segmentation takes a long time. In this study, we propose a method algorithm for automatically segmenting the liver and tumor for this purpose. As an advantage of setting the boundaries of the tumor, the liver and tumor were automatically segmented from the CT image using the 2D CoordConv DeepLab V3+ model using the CoordConv layer. For tumors, only cropped liver images were used to improve accuracy. Additionally, to increase the segmentation accuracy, augmentation, preprocess, loss function, and hyperparameter were used to find optimal values. We compared the CoordConv DeepLab v3+ model using the CoordConv layer and the DeepLab V3+ model without the CoordConv layer to determine whether they affected the segmentation accuracy. The data sets used included 131 hepatic tumor segmentation (LiTS) challenge data sets (100 train sets, 16 validation sets, and 15 test sets). Additional learned data were tested using 15 clinical data from Seoul St. Mary's Hospital. The evaluation was compared with the study results learned with a two-dimensional deep learning-based model. Dice values without the CoordConv layer achieved 0.965 ± 0.01 for liver segmentation and 0.925 ± 0.04 for tumor segmentation using the LiTS data set. Results from the clinical data set achieved 0.927 ± 0.02 for liver division and 0.903 ± 0.05 for tumor division. The dice values using the CoordConv layer achieved 0.989 ± 0.02 for liver segmentation and 0.937 ± 0.07 for tumor segmentation using the LiTS data set. Results from the clinical data set achieved 0.944 ± 0.02 for liver division and 0.916 ± 0.18 for tumor division. The use of CoordConv layers improves the segmentation accuracy. The highest of the most recently published values were 0.960 and 0.749 for liver and tumor division, respectively. However, better performance was achieved with 0.989 and 0.937 results for liver and tumor, which would have been used with the algorithm proposed in this study. The algorithm proposed in this study can play a useful role in treatment planning by improving contouring accuracy and reducing time when segmentation evaluation of liver and tumor is performed. And accurate identification of liver anatomy in medical imaging applications, such as surgical planning, as well as radiotherapy, which can leverage the findings of this study, can help clinical evaluation of the risks and benefits of liver intervention.

Optimization of Multi-Atlas Segmentation with Joint Label Fusion Algorithm for Automatic Segmentation in Prostate MR Imaging

  • Choi, Yoon Ho;Kim, Jae-Hun;Kim, Chan Kyo
    • Investigative Magnetic Resonance Imaging
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    • 제24권3호
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    • pp.123-131
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    • 2020
  • Purpose: Joint label fusion (JLF) is a popular multi-atlas-based segmentation algorithm, which compensates for dependent errors that may exist between atlases. However, in order to get good segmentation results, it is very important to set the several free parameters of the algorithm to optimal values. In this study, we first investigate the feasibility of a JLF algorithm for prostate segmentation in MR images, and then suggest the optimal set of parameters for the automatic prostate segmentation by validating the results of each parameter combination. Materials and Methods: We acquired T2-weighted prostate MR images from 20 normal heathy volunteers and did a series of cross validations for every set of parameters of JLF. In each case, the atlases were rigidly registered for the target image. Then, we calculated their voting weights for label fusion from each combination of JLF's parameters (rpxy, rpz, rsxy, rsz, β). We evaluated the segmentation performances by five validation metrics of the Prostate MR Image Segmentation challenge. Results: As the number of voxels participating in the voting weight calculation and the number of referenced atlases is increased, the overall segmentation performance is gradually improved. The JLF algorithm showed the best results for dice similarity coefficient, 0.8495 ± 0.0392; relative volume difference, 15.2353 ± 17.2350; absolute relative volume difference, 18.8710 ± 13.1546; 95% Hausdorff distance, 7.2366 ± 1.8502; and average boundary distance, 2.2107 ± 0.4972; in parameters of rpxy = 10, rpz = 1, rsxy = 3, rsz = 1, and β = 3. Conclusion: The evaluated results showed the feasibility of the JLF algorithm for automatic segmentation of prostate MRI. This empirical analysis of segmentation results by label fusion allows for the appropriate setting of parameters.

Segmentation of Mammography Breast Images using Automatic Segmen Adversarial Network with Unet Neural Networks

  • Suriya Priyadharsini.M;J.G.R Sathiaseelan
    • International Journal of Computer Science & Network Security
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    • 제23권12호
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    • pp.151-160
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    • 2023
  • Breast cancer is the most dangerous and deadly form of cancer. Initial detection of breast cancer can significantly improve treatment effectiveness. The second most common cancer among Indian women in rural areas. Early detection of symptoms and signs is the most important technique to effectively treat breast cancer, as it enhances the odds of receiving an earlier, more specialist care. As a result, it has the possible to significantly improve survival odds by delaying or entirely eliminating cancer. Mammography is a high-resolution radiography technique that is an important factor in avoiding and diagnosing cancer at an early stage. Automatic segmentation of the breast part using Mammography pictures can help reduce the area available for cancer search while also saving time and effort compared to manual segmentation. Autoencoder-like convolutional and deconvolutional neural networks (CN-DCNN) were utilised in previous studies to automatically segment the breast area in Mammography pictures. We present Automatic SegmenAN, a unique end-to-end adversarial neural network for the job of medical image segmentation, in this paper. Because image segmentation necessitates extensive, pixel-level labelling, a standard GAN's discriminator's single scalar real/fake output may be inefficient in providing steady and appropriate gradient feedback to the networks. Instead of utilising a fully convolutional neural network as the segmentor, we suggested a new adversarial critic network with a multi-scale L1 loss function to force the critic and segmentor to learn both global and local attributes that collect long- and short-range spatial relations among pixels. We demonstrate that an Automatic SegmenAN perspective is more up to date and reliable for segmentation tasks than the state-of-the-art U-net segmentation technique.

딥 러닝 기반의 팬옵틱 분할 기법 분석 (Survey on Deep Learning-based Panoptic Segmentation Methods)

  • 권정은;조성인
    • 대한임베디드공학회논문지
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    • 제16권5호
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    • pp.209-214
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    • 2021
  • Panoptic segmentation, which is now widely used in computer vision such as medical image analysis, and autonomous driving, helps understanding an image with holistic view. It identifies each pixel by assigning a unique class ID, and an instance ID. Specifically, it can classify 'thing' from 'stuff', and provide pixel-wise results of semantic prediction and object detection. As a result, it can solve both semantic segmentation and instance segmentation tasks through a unified single model, producing two different contexts for two segmentation tasks. Semantic segmentation task focuses on how to obtain multi-scale features from large receptive field, without losing low-level features. On the other hand, instance segmentation task focuses on how to separate 'thing' from 'stuff' and how to produce the representation of detected objects. With the advances of both segmentation techniques, several panoptic segmentation models have been proposed. Many researchers try to solve discrepancy problems between results of two segmentation branches that can be caused on the boundary of the object. In this survey paper, we will introduce the concept of panoptic segmentation, categorize the existing method into two representative methods and explain how it is operated on two methods: top-down method and bottom-up method. Then, we will analyze the performance of various methods with experimental results.

고속 이진화 영상처리를 이용한 관심영역 추출 알고리즘 (Algorithm for Extract Region of Interest Using Fast Binary Image Processing)

  • 조영복;우성희
    • 한국정보통신학회논문지
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    • 제22권4호
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    • pp.634-640
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    • 2018
  • 본 논문에서는 방사선 영상을 기반으로 관심 영역의 자동 추출 알고리즘을 제안한다. 제안 알고리즘은 입력 영상에서 병변부위를 검출하기 위해 세그먼테이션, 특징 추출 및 참조 이미지 매칭을 이용한다. 추출된 영역은 참조 DB에서 일치하는 병변 이미지를 검색하고, 일치된 결과는 칼만 필터 기반의 적합성 피드백을 이용해 병변을 자동 추출한다. 제안 알고리즘은 왼손 x-ray 입력 영상을 기반으로 성장판을 추출하기 위해 왼손 이미지의 윤곽선을 추출하고, 이것은 다중 스케일 해시안 행렬 기반의 세션화를 이용해 후보 영역을 생성 한다. 그 결과, 제안 알고리즘은 관심영역 분할 단계에서는 0.02초로 빠른 분할이 가능하였고, 분할 영상을 기준으로 ROI 추출시 평균 0.53, 강화 단계에서는 0.49초로 매우 정확한 이미지 분할이 가능한 것을 실험을 통해 알 수 있었다.

Adaptive Active Contour Model: a Localized Mutual Information Approach for Medical Image Segmentation

  • Dai, Shuanglu;Zhan, Shu;Song, Ning
    • KSII Transactions on Internet and Information Systems (TIIS)
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    • 제9권5호
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    • pp.1840-1855
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    • 2015
  • Troubles are often met when traditional active contours extract boundaries of medical images with inhomogeneous bias and various noises. Focusing on such a circumstance, a localized mutual information active contour model is discussed in the paper. By defining neighborhood of each point on the level set, mutual information is introduced to describe the relationship between the zero level set and image field. A driving energy term is then generated by integrating all the information. In addition, an expanding energy and internal energy are designed to regularize the driving energy. Contrary to piecewise constant model, new model has a better command of driving the contours without initialization.